Regulon of SAM in Clostridium butyricum 5521
| Regulator type: | RNA regulatory element |
| Name: | SAM |
| RFAM: | RF00162 |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Regulog: | SAM - Clostridiaceae |
| Under regulation: | |
| - Genes | 7 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - SAM
- By effector - S-adenosylmethionine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -295
Score: 91.1 Sequence: TCTTATCAAGAGAGG...
Locus tag: CBY_1316
Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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metK
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S-adenosylmethionine synthetase (EC 2.5.1.6)
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Position: -317
Score: 79.6 Sequence: TTTTATCAAGAAAGA...
Locus tag: CBY_4078
Name: metY Funciton: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
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metY
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O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
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Position: -337
Score: 90 Sequence: CAACTTATCAAGAGT...
Locus tag: CBY_2058
Name: metQ5 Funciton: Methionine ABC transporter, substrate-binding component
Locus tag: CBY_2057
Name: metN5 Funciton: Methionine ABC transporter, ATP-binding component
Locus tag: CBY_2056
Name: metP5 Funciton: Methionine ABC transporter, permease component |
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metQ5
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Methionine ABC transporter, substrate-binding component
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metN5
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Methionine ABC transporter, ATP-binding component
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metP5
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Methionine ABC transporter, permease component
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Position: -289
Score: 91.2 Sequence: ACTTATCAAGAGTGG...
Locus tag: CBY_0038
Name: msd Funciton: Methionine synthase activation domain (EC 2.1.1.13)
Locus tag: CBY_0039
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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msd
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Methionine synthase activation domain (EC 2.1.1.13)
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |