Regulog SAM - Thermotogales
| Regulator type: | RNA regulatory element |
| Name: | SAM |
| RFAM: | RF00162 |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Phylum: | Thermotogae |
Member of regulog collections
- By taxonomy - Thermotogales
- By RNA motif - SAM
- By effector - S-adenosylmethionine
- By pathway - Methionine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Thermotoga maritima MSB8 | ||
| Thermotoga sp. RQ2 | ||
| Thermotoga neapolitana DSM 4359 | ||
| Thermotoga petrophila RKU-1 | ||
| Thermotoga naphthophila RKU-10 | ||
| Thermotoga lettingae TMO | ||
| Thermosipho africanus TCF52B | ||
| Thermosipho melanesiensis BI429 | ||
| Fervidobacterium nodosum Rt17-B1 | ||
| Petrotoga mobilis SJ95 | 3 | 1 |
| Thermotogales bacterium TBF 19.5.1 |
| Genes | Function | |||||||||||
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| CRON 1. | ||||||||||||
| metN |
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Petrotoga mobilis SJ95 Site: position = -274 score = 98.94 sequence = TTCCTTATCGAGAGA... Gene: Pmob_1131: Methionine ABC transporter substrate-binding protein |
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Methionine ABC transporter substrate-binding protein |
| metQ |
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Gene: Pmob_1130: Methionine ABC transporter ATP-binding protein |
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Methionine ABC transporter ATP-binding protein |
| metP |
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Gene: Pmob_1129: Methionine ABC transporter permease protein |
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Methionine ABC transporter permease protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |