Regulog MetR - Psychromonadaceae/Aeromonadales
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Psychromonas ingrahamii 37 | 2 | 2 |
| Psychromonas sp. CNPT3 | ||
| Moritella sp. PE36 | 2 | 2 |
| Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 2 | 2 |
| Aeromonas salmonicida subsp. salmonicida A449 | 2 | 2 |
| Tolumonas auensis DSM 9187 | 2 | 2 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| metR |
*
Psychromonas ingrahamii 37 Site: position = -61 score = 5.52114 sequence = TATGAATTTTTTTCAAG Site: position = -200 score = 4.47127 sequence = TTTGAATGGTATACATG Gene: Ping_1476: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
|
*
Moritella sp. PE36 Site: position = -63 score = 4.2995 sequence = GTTGAAATTAATTGATG Site: position = -94 score = 4.79499 sequence = CATGAATCAAATTCATA Gene: PE36_01280: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -82 score = 5.04568 sequence = ATTGAATCCTTTTCAAC Gene: AHA_1955: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -130 score = 5.18205 sequence = ATTGAATACTCTTCAAC Gene: ASA_2339: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Tolumonas auensis DSM 9187 Site: position = -14 score = 4.58904 sequence = CTTGCAGGTTTTTCATG Gene: Tola_2943: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
| CRON 2. | |||||||
| metE |
*
Psychromonas ingrahamii 37 Site: position = -113 score = 4.825 sequence = TATGAATTTACCTCATG Gene: Ping_3386: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
|
*
Moritella sp. PE36 Site: position = -126 score = 5.31151 sequence = TATGAATTTGATTCATG Site: position = -157 score = 4.30672 sequence = CATCAATTAATTTCAAC Gene: PE36_01285: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -108 score = 4.83605 sequence = GTTGAAAAGGATTCAAT Gene: AHA_1956: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -117 score = 5.01885 sequence = GTTGAAGAGTATTCAAT Gene: ASA_2338: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Tolumonas auensis DSM 9187 Site: position = -112 score = 4.4913 sequence = CATGAAAAACCTGCAAG Gene: Tola_2944: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |