Regulog MetJ - Vibrionales
| Regulator type: | Transcription factor |
| Regulator family: | MetJ |
| Regulation mode: | repressor |
| Biological process: | Methionine metabolism; Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - MetJ
- By TF family - MetJ
- By effector - S-adenosylmethionine
- By pathway - Methionine metabolism
- By pathway - Methionine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Vibrio cholerae O1 biovar eltor str. N16961 | 14 | 11 |
| Vibrio vulnificus CMCP6 | 17 | 12 |
| Vibrio harveyi ATCC BAA-1116 | 18 | 13 |
| Vibrio parahaemolyticus RIMD 2210633 | 18 | 13 |
| Vibrio shilonii AK1 | 15 | 12 |
| Vibrio splendidus LGP32 | 16 | 11 |
| Vibrio fischeri ES114 | 16 | 11 |
| Vibrio salmonicida LFI1238 | 15 | 10 |
| Vibrio angustum S14 | 18 | 12 |
| Photobacterium profundum SS9 | 16 | 11 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| metK |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -131 score = 6.83359 sequence = AGCCGTCT-(0)-AGATGTAG Site: position = -123 score = 5.79378 sequence = AGATGTAG-(0)-AAACGCCT Gene: VC0472: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Vibrio vulnificus CMCP6 Site: position = -98 score = 7.21097 sequence = AGACGTCT-(0)-AGATGTAG Gene: VV1_1536: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -97 score = 7.21097 sequence = AGACGTCT-(0)-AGATGTAG Gene: VIBHAR_03568: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -97 score = 7.21097 sequence = AGACGTCT-(0)-AGATGTAG Gene: VP2606: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Vibrio shilonii AK1 Site: position = -92 score = 7.21097 sequence = AGACGTCT-(0)-AGATGTAG Gene: VSAK1_07864: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Vibrio splendidus LGP32 Site: position = -129 score = 6.83359 sequence = AGCCGTCT-(0)-AGATGTAG Gene: VS_2655: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Vibrio fischeri ES114 Site: position = -68 score = 6.46241 sequence = AAACGTAT-(0)-AGACTTAT Site: position = -100 score = 6.61782 sequence = AGACGTCT-(0)-AGATGGAA Gene: VF_0439: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Vibrio salmonicida LFI1238 Site: position = -101 score = 5.74843 sequence = GGCCGTCT-(0)-AGATGGAA Site: position = -69 score = 6.46241 sequence = AAACGTAT-(0)-AGACTTAT Gene: VSAL_I0552: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Vibrio angustum S14 Site: position = -107 score = 6.74581 sequence = AGACGTCT-(0)-AGACGGAA Gene: VAS14_20221: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Photobacterium profundum SS9 Site: position = -126 score = 6.55798 sequence = AGCCGTCT-(0)-AGACGGAG Gene: PBPRA3134: S-adenosylmethionine synthetase (EC 2.5.1.6) |
S-adenosylmethionine synthetase (EC 2.5.1.6) |
| CRON 2. | |||||||||||
| metR |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -85 score = 7.40921 sequence = AGCCATCT-(0)-AGATGTTT Gene: VC1706: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Vibrio vulnificus CMCP6 Site: position = -197 score = 7.11408 sequence = AGATGTCT-(0)-GGATGGCT Site: position = -82 score = 7.9863 sequence = AGACGTCT-(0)-AGATGTTT Gene: VV1_2218: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -203 score = 7.11408 sequence = AGATGTCT-(0)-GGATGGCT Site: position = -82 score = 8.11428 sequence = AGACGTCT-(0)-AGACGTTT Gene: VIBHAR_02773: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -259 score = 8.11428 sequence = AGACGTCT-(0)-AGACGTTT Gene: VP1976: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Vibrio shilonii AK1 Site: position = -178 score = 6.61389 sequence = AGCAGTCT-(0)-GGATGGCT Site: position = -73 score = 7.49428 sequence = GGACGTCT-(0)-AGATGTTT Gene: VSAK1_00947: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Vibrio splendidus LGP32 Site: position = -89 score = 7.42256 sequence = GGACATCT-(0)-AGACGTTT Site: position = -210 score = 6.68391 sequence = AGGCGTCT-(0)-GGATGGCT Gene: VS_1144: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Vibrio fischeri ES114 Site: position = -84 score = 7.60892 sequence = AGCCGTCT-(0)-AGATGTTT Site: position = -205 score = 6.63723 sequence = AGCCGTTT-(0)-GGATGGCT Gene: VF_1722: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Vibrio salmonicida LFI1238 Site: position = -205 score = 6.63723 sequence = AGCCGTTT-(0)-GGATGGCT Site: position = -84 score = 7.60892 sequence = AGCCGTCT-(0)-AGATGTTT Gene: VSAL_I0860: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Vibrio angustum S14 Site: position = -87 score = 6.20313 sequence = AGACGTTT-(0)-AGCCATCT Site: position = -79 score = 7.40921 sequence = AGCCATCT-(0)-AGATGTTT Gene: VAS14_04738: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Photobacterium profundum SS9 Site: position = -232 score = 6.18058 sequence = AGCGGTAT-(0)-GGATGGCT Site: position = -82 score = 7.9863 sequence = AGACGTCT-(0)-AGATGTTT Gene: PBPRA1378: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
| CRON 3. | |||||||||||
| csd |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -34 score = 5.47411 sequence = GGGCATAT-(0)-GGATGTTT Gene: VC1184: Cysteine desulfurase (EC 2.8.1.7) |
*
Vibrio vulnificus CMCP6 Site: position = -43 score = 5.09717 sequence = GGTCATAT-(0)-GGATGTGT Gene: VV1_2808: Cysteine desulfurase (EC 2.8.1.7) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -217 score = 5.3487 sequence = ATCCATCA-(0)-AGATGGTT Gene: VIBHAR_02028: Cysteine desulfurase (EC 2.8.1.7) |
Gene: VP1253: Cysteine desulfurase (EC 2.8.1.7) |
*
Vibrio shilonii AK1 Site: position = -247 score = 5.00389 sequence = GTACATCA-(0)-AGATGGAT Gene: VSAK1_06235: Cysteine desulfurase (EC 2.8.1.7) |
Gene: VS_1192: Cysteine desulfurase (EC 2.8.1.7) |
*
Vibrio fischeri ES114 Site: position = -43 score = 5.69707 sequence = GGGCATAT-(0)-GGACGTTT Gene: VF_A0768: Cysteine desulfurase (EC 2.8.1.7) |
*
Vibrio salmonicida LFI1238 Site: position = -112 score = 6.25112 sequence = GGACATAT-(0)-GGATGTTT Gene: VSAL_II0879: Cysteine desulfurase (EC 2.8.1.7) |
*
Vibrio angustum S14 Site: position = -217 score = 5.96561 sequence = ATACATCA-(0)-AGATGGCT Gene: VAS14_13649: Cysteine desulfurase (EC 2.8.1.7) |
Gene: PBPRB1853: Cysteine desulfurase (EC 2.8.1.7) |
Cysteine desulfurase (EC 2.8.1.7) |
| CRON 4. | |||||||||||
| btuB |
|
*
Vibrio vulnificus CMCP6 Site: position = -222 score = 6.82975 sequence = GGAAGTAT-(0)-AGATGGCT Gene: VV1_1173: TonB-dependent outer membrane transporter for vitamin B12 |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -231 score = 6.89284 sequence = AGCAATCT-(0)-AGATGGCT Gene: VIBHAR_00261: TonB-dependent outer membrane transporter for vitamin B12 |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -231 score = 6.89284 sequence = AGCAATCT-(0)-AGATGGCT Gene: VP2938: TonB-dependent outer membrane transporter for vitamin B12 |
*
Vibrio shilonii AK1 Site: position = -321 score = 4.84841 sequence = ATATGGCT-(0)-GGATATCT Gene: VSAK1_13281: TonB-dependent outer membrane transporter for vitamin B12 |
*
Vibrio splendidus LGP32 Site: position = -215 score = 6.95255 sequence = GGATGTAT-(0)-AGATGGCT Gene: VS_2998: TonB-dependent outer membrane transporter for vitamin B12 |
|
|
|
Gene: PBPRA3464: TonB-dependent outer membrane transporter for vitamin B12 |
TonB-dependent outer membrane transporter for vitamin B12 |
| CRON 5. | |||||||||||
| metH |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -66 score = 7.8467 sequence = AGACGTCT-(0)-AGATTTCT Gene: VC0390: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
*
Vibrio vulnificus CMCP6 Site: position = -67 score = 7.32611 sequence = AGACGTCT-(0)-AGACTCCT Gene: VV1_1423: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -66 score = 7.32611 sequence = AGACGTCT-(0)-AGACTCCT Gene: VIBHAR_03712: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -66 score = 7.32611 sequence = AGACGTCT-(0)-AGACTCCT Gene: VP2717: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
*
Vibrio shilonii AK1 Site: position = -73 score = 6.92388 sequence = AGATTTTT-(0)-AGACGTCT Site: position = -65 score = 7.8467 sequence = AGACGTCT-(0)-AGATTTCT Gene: VSAK1_04630: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
*
Vibrio splendidus LGP32 Site: position = -66 score = 7.32611 sequence = AGACGTCT-(0)-AGACTCCT Gene: VS_0315: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
*
Vibrio fischeri ES114 Site: position = -69 score = 7.8467 sequence = AGACGTCT-(0)-AGATTTCT Gene: VF_0337: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
*
Vibrio salmonicida LFI1238 Site: position = -68 score = 7.8467 sequence = AGACGTCT-(0)-AGATTTCT Gene: VSAL_I0442: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
*
Vibrio angustum S14 Site: position = -12 score = 5.17489 sequence = GGATGTAG-(0)-TGACGTGT Gene: VAS14_19426: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
*
Photobacterium profundum SS9 Site: position = -77 score = 6.68465 sequence = AGGTATTT-(0)-AGACGTCT Site: position = -69 score = 7.23711 sequence = AGACGTCT-(0)-AGATTTCC Gene: PBPRA3294: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
| CRON 6. | |||||||||||
| metQ2 |
|
|
|
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -36 score = 7.47529 sequence = AGCCGTAT-(0)-GGACGTCT Gene: VP0379: Methionine ABC transporter substrate-binding protein |
|
|
|
|
|
|
Methionine ABC transporter substrate-binding protein |
| CRON 7. | |||||||||||
| metA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -30 score = 6.09088 sequence = ATAAGTCT-(0)-GGATGTTT Site: position = -22 score = 6.56808 sequence = GGATGTTT-(0)-AGACGTCC Gene: VC1611: Homoserine O-succinyltransferase (EC 2.3.1.46) |
*
Vibrio vulnificus CMCP6 Site: position = -43 score = 7.97616 sequence = AGATGTAT-(0)-AGACGTCT Site: position = -51 score = 5.56801 sequence = ATAGGTTT-(0)-AGATGTAT Gene: VV1_2772: Homoserine O-succinyltransferase (EC 2.3.1.46) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -44 score = 7.97616 sequence = AGATGTAT-(0)-AGACGTCT Gene: VIBHAR_02491: Homoserine O-succinyltransferase (EC 2.3.1.46) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -45 score = 7.85335 sequence = AGAAGTAT-(0)-AGACGTCT Gene: VP1751: Homoserine O-succinyltransferase (EC 2.3.1.46) |
*
Vibrio shilonii AK1 Site: position = -40 score = 5.93524 sequence = AGACGTCC-(0)-AGATGACC Site: position = -48 score = 7.36657 sequence = AGATGTAT-(0)-AGACGTCC Gene: VSAK1_06879: Homoserine O-succinyltransferase (EC 2.3.1.46) |
*
Vibrio splendidus LGP32 Site: position = -33 score = 6.56259 sequence = AGACGTCT-(0)-ACATATCT Site: position = -41 score = 7.97616 sequence = AGATGTAT-(0)-AGACGTCT Gene: VS_1677: Homoserine O-succinyltransferase (EC 2.3.1.46) |
*
Vibrio fischeri ES114 Site: position = -40 score = 7.2264 sequence = AGAAGTAT-(0)-AGACGTAT Gene: VF_2063: Homoserine O-succinyltransferase (EC 2.3.1.46) |
*
Vibrio salmonicida LFI1238 Site: position = -45 score = 6.96548 sequence = AGACGTAT-(0)-AGAATGCT Site: position = -53 score = 6.44107 sequence = AGGAGTAT-(0)-AGACGTAT Gene: VSAL_I2499: Homoserine O-succinyltransferase (EC 2.3.1.46) |
*
Vibrio angustum S14 Site: position = -39 score = 6.1592 sequence = AGACGGCT-(0)-AAACATCT Site: position = -47 score = 6.65126 sequence = GGAAGTTT-(0)-AGACGGCT Gene: VAS14_19416: Homoserine O-succinyltransferase (EC 2.3.1.46) |
*
Photobacterium profundum SS9 Site: position = -45 score = 7.92461 sequence = AGATATCT-(0)-AGACGTCT Site: position = -37 score = 7.10576 sequence = AGACGTCT-(0)-AAACATCT Gene: PBPRA0369: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Homoserine O-succinyltransferase (EC 2.3.1.46) |
| CRON 8. | |||||||||||
| metJ |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -108 score = 6.02571 sequence = AGACGTCA-(0)-ACACTTCT Site: position = -100 score = 6.9173 sequence = ACACTTCT-(0)-AGACGTCT Site: position = -92 score = 7.34652 sequence = AGACGTCT-(0)-ACATGTCT Gene: VC2682: S-adenosylmethionine-responsive transcriptional repressor MetJ |
*
Vibrio vulnificus CMCP6 Site: position = -108 score = 6.02571 sequence = AGACGTCA-(0)-ACACTTCT Site: position = -100 score = 6.9173 sequence = ACACTTCT-(0)-AGACGTCT Site: position = -92 score = 7.72544 sequence = AGACGTCT-(0)-ATATGTCT Gene: VV1_1362: S-adenosylmethionine-responsive transcriptional repressor MetJ |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -110 score = 6.02571 sequence = AGACGTCA-(0)-ACACTTCT Site: position = -102 score = 6.9173 sequence = ACACTTCT-(0)-AGACGTCT Site: position = -94 score = 7.72544 sequence = AGACGTCT-(0)-ATATGTCT Gene: VIBHAR_00050: S-adenosylmethionine-responsive transcriptional repressor MetJ |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -92 score = 7.72544 sequence = AGACGTCT-(0)-ATATGTCT Site: position = -108 score = 6.02571 sequence = AGACGTCA-(0)-ACACTTCT Site: position = -100 score = 6.9173 sequence = ACACTTCT-(0)-AGACGTCT Gene: VP2766: S-adenosylmethionine-responsive transcriptional repressor MetJ |
*
Vibrio shilonii AK1 Site: position = -111 score = 6.02571 sequence = AGACGTCA-(0)-ACACTTCT Site: position = -103 score = 6.9173 sequence = ACACTTCT-(0)-AGACGTCT Site: position = -95 score = 7.72544 sequence = AGACGTCT-(0)-ATATGTCT Gene: VSAK1_09478: S-adenosylmethionine-responsive transcriptional repressor MetJ |
*
Vibrio splendidus LGP32 Site: position = -107 score = 5.41612 sequence = AGACGTCA-(0)-ACACTTCC Site: position = -91 score = 7.23343 sequence = GGACGTCT-(0)-ATATGTCT Gene: VS_2895: S-adenosylmethionine-responsive transcriptional repressor MetJ |
*
Vibrio fischeri ES114 Site: position = -108 score = 6.02571 sequence = AGACGTCA-(0)-ACACTTCT Site: position = -100 score = 6.9173 sequence = ACACTTCT-(0)-AGACGTCT Site: position = -92 score = 7.72544 sequence = AGACGTCT-(0)-ATATGTCT Gene: VF_2268: S-adenosylmethionine-responsive transcriptional repressor MetJ |
*
Vibrio salmonicida LFI1238 Site: position = -109 score = 6.40463 sequence = AGACGTCA-(0)-ATACTTCT Site: position = -101 score = 6.79489 sequence = ATACTTCT-(0)-AGACGTCT Site: position = -93 score = 6.94152 sequence = AGACGTCT-(0)-ATATATCT Gene: VSAL_I2746: S-adenosylmethionine-responsive transcriptional repressor MetJ |
*
Vibrio angustum S14 Site: position = -215 score = 7.23343 sequence = GGACGTCT-(0)-ATATGTCT Site: position = -223 score = 6.98474 sequence = ACACATCT-(0)-GGACGTCT Site: position = -231 score = 5.74658 sequence = AGACGTCA-(0)-ACACATCT Gene: VAS14_21447: S-adenosylmethionine-responsive transcriptional repressor MetJ |
*
Photobacterium profundum SS9 Site: position = -106 score = 5.41612 sequence = AGACGTCA-(0)-ACACTTCC Site: position = -90 score = 7.72544 sequence = AGACGTCT-(0)-ATATGTCT Gene: PBPRA0260: S-adenosylmethionine-responsive transcriptional repressor MetJ |
S-adenosylmethionine-responsive transcriptional repressor MetJ |
| CRON 9. | |||||||||||
| mtsA |
|
*
Vibrio vulnificus CMCP6 Site: position = -181 score = 5.64371 sequence = AGACATCC-(0)-AGACAGAT Gene: VV21534: Substrate-specific component MtsA of methionine-regulated ECF transporter |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -244 score = 5.26633 sequence = AGCCATCC-(0)-AGACAGAT Gene: VIBHAR_05109: Substrate-specific component MtsA of methionine-regulated ECF transporter |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -252 score = 5.26633 sequence = AGCCATCC-(0)-AGACAGAT Gene: VPA1481: Substrate-specific component MtsA of methionine-regulated ECF transporter |
|
*
Vibrio splendidus LGP32 Site: position = -177 score = 4.69651 sequence = AGACCACT-(0)-AAACGGTC Gene: VS_II0189: Substrate-specific component MtsA of methionine-regulated ECF transporter |
*
Vibrio fischeri ES114 Site: position = -96 score = 6.64405 sequence = AGCCGTCT-(0)-AGATGTAA Site: position = -104 score = 6.35665 sequence = AAACATAT-(0)-AGCCGTCT Gene: VF_1566: Substrate-specific component MtsA of methionine-regulated ECF transporter |
*
Vibrio salmonicida LFI1238 Site: position = -92 score = 6.64405 sequence = AGCCGTCT-(0)-AGATGTAA Gene: VSAL_I1988: Substrate-specific component MtsA of methionine-regulated ECF transporter |
*
Vibrio angustum S14 Site: position = -303 score = 7.02143 sequence = AGACGTCT-(0)-AGATGTAA Gene: VAS14_04448: Substrate-specific component MtsA of methionine-regulated ECF transporter |
*
Photobacterium profundum SS9 Site: position = -239 score = 6.61782 sequence = AGACGTCT-(0)-AGATGGAA Gene: PBPRA2239: Substrate-specific component MtsA of methionine-regulated ECF transporter |
Substrate-specific component MtsA of methionine-regulated ECF transporter |
| mtsB |
|
Gene: VV21533: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter |
Gene: VIBHAR_05108: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter |
Gene: VPA1482: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter |
|
Gene: VS_II0188: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter |
Gene: VF_1565: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter |
Gene: VSAL_I1989: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter |
Gene: VAS14_04453: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter |
Gene: PBPRA2240: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter |
Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter |
| mtsC |
|
Gene: VV21532: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
Gene: VIBHAR_05107: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
Gene: VPA1483: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
|
Gene: VS_II0187: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
Gene: VF_1564: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
Gene: VSAL_I1990: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
Gene: VAS14_04458: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
Gene: PBPRA2241: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
| CRON 10. | |||||||||||
| metT |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -79 score = 6.71387 sequence = GGACGTCT-(0)-AGACTGTT Site: position = -87 score = 6.69901 sequence = GGATGTTT-(0)-GGACGTCT Gene: VCA0193: Methionine transporter MetT, NhaC antiporter family |
|
*
Vibrio harveyi ATCC BAA-1116 Site: position = -76 score = 7.6007 sequence = AGACGTCT-(0)-AGACGTTG Site: position = -84 score = 7.44776 sequence = AGCCATTT-(0)-AGACGTCT Gene: VIBHAR_01104: Methionine transporter MetT, NhaC antiporter family |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -21 score = 7.44776 sequence = AGCCATTT-(0)-AGACGTCT Site: position = -13 score = 7.6007 sequence = AGACGTCT-(0)-AGACGTTG Gene: VP0632: Methionine transporter MetT, NhaC antiporter family |
*
Vibrio shilonii AK1 Site: position = -83 score = 6.85446 sequence = GGACATTT-(0)-GGACGTCT Site: position = -75 score = 7.10869 sequence = GGACGTCT-(0)-AGACGTTG Site: position = -67 score = 5.94788 sequence = AGACGTTG-(0)-ACATGTCT Gene: VSAK1_25825: Methionine transporter MetT, NhaC antiporter family |
*
Vibrio splendidus LGP32 Site: position = -75 score = 7.6007 sequence = AGACGTCT-(0)-AGACGTTG Site: position = -83 score = 6.7475 sequence = GGGCGTTT-(0)-AGACGTCT Gene: VS_II1202: Methionine transporter MetT, NhaC antiporter family |
|
|
*
Vibrio angustum S14 Site: position = -78 score = 7.47271 sequence = AGACGTCT-(0)-AGATGTTG Site: position = -86 score = 7.66969 sequence = AGATGTTT-(0)-AGACGTCT Gene: VAS14_16434: Methionine transporter MetT, NhaC antiporter family |
*
Photobacterium profundum SS9 Site: position = -85 score = 7.17767 sequence = GGATGTTT-(0)-AGACGTCT Site: position = -77 score = 7.14326 sequence = AGACGTCT-(0)-AGAAGTTG Gene: PBPRA2837: Methionine transporter MetT, NhaC antiporter family |
Methionine transporter MetT, NhaC antiporter family |
| CRON 11. | |||||||||||
| mmuM |
|
|
Gene: VIBHAR_05821: Homocysteine S-methyltransferase (EC 2.1.1.10) |
|
Gene: VSAK1_01497: Homocysteine S-methyltransferase (EC 2.1.1.10) |
Gene: VS_II0079: Homocysteine S-methyltransferase (EC 2.1.1.10) |
|
|
*
Vibrio angustum S14 Site: position = -18 score = 6.86933 sequence = AGCAGTAT-(0)-GGATGTCT Gene: VAS14_13164: Homocysteine S-methyltransferase (EC 2.1.1.10) |
|
Homocysteine S-methyltransferase (EC 2.1.1.10) |
| CRON 12. | |||||||||||
| metB |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -175 score = 6.5891 sequence = AGAAGTGT-(0)-TGACGTCT Site: position = -191 score = 7.64808 sequence = AGACATGT-(0)-AGACGTCT Site: position = -183 score = 7.43751 sequence = AGACGTCT-(0)-AGAAGTGT Gene: VC2683: Cystathionine gamma-synthase (EC 2.5.1.48) |
*
Vibrio vulnificus CMCP6 Site: position = -135 score = 8.13161 sequence = AGACATAT-(0)-AGACGTCT Site: position = -119 score = 6.5891 sequence = AGAAGTGT-(0)-TGACGTCT Site: position = -127 score = 7.43751 sequence = AGACGTCT-(0)-AGAAGTGT Gene: VV1_1364: Cystathionine gamma-synthase (EC 2.5.1.48) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -143 score = 7.43751 sequence = AGACGTCT-(0)-AGAAGTGT Site: position = -151 score = 8.13161 sequence = AGACATAT-(0)-AGACGTCT Site: position = -135 score = 6.5891 sequence = AGAAGTGT-(0)-TGACGTCT Gene: VIBHAR_00049: Cystathionine gamma-synthase (EC 2.5.1.48) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -135 score = 6.5891 sequence = AGAAGTGT-(0)-TGACGTCT Site: position = -143 score = 7.43751 sequence = AGACGTCT-(0)-AGAAGTGT Site: position = -151 score = 8.13161 sequence = AGACATAT-(0)-AGACGTCT Gene: VP2765: Cystathionine gamma-synthase (EC 2.5.1.48) |
*
Vibrio shilonii AK1 Site: position = -180 score = 8.13161 sequence = AGACATAT-(0)-AGACGTCT Site: position = -164 score = 6.5891 sequence = AGAAGTGT-(0)-TGACGTCT Site: position = -172 score = 7.43751 sequence = AGACGTCT-(0)-AGAAGTGT Gene: VSAK1_09473: Cystathionine gamma-synthase (EC 2.5.1.48) |
*
Vibrio splendidus LGP32 Site: position = -89 score = 6.13726 sequence = AGACGTCC-(0)-GGAAGTGT Site: position = -97 score = 7.52203 sequence = AGACATAT-(0)-AGACGTCC Site: position = -81 score = 6.09709 sequence = GGAAGTGT-(0)-TGACGTCT Gene: VS_2894: Cystathionine gamma-synthase (EC 2.5.1.48) |
*
Vibrio fischeri ES114 Site: position = -256 score = 6.5891 sequence = AGAAGTGT-(0)-TGACGTCT Site: position = -272 score = 8.13161 sequence = AGACATAT-(0)-AGACGTCT Site: position = -264 score = 7.43751 sequence = AGACGTCT-(0)-AGAAGTGT Gene: VF_2267: Cystathionine gamma-synthase (EC 2.5.1.48) |
*
Vibrio salmonicida LFI1238 Site: position = -94 score = 7.07263 sequence = AGAAGTAT-(0)-TGACGTCT Site: position = -102 score = 7.39509 sequence = AGACGTCT-(0)-AGAAGTAT Site: position = -110 score = 7.77645 sequence = AGATATAT-(0)-AGACGTCT Gene: VSAL_I2747: Cystathionine gamma-synthase (EC 2.5.1.48) |
*
Vibrio angustum S14 Site: position = -89 score = 6.71191 sequence = AGATGTGT-(0)-TGACGTCT Site: position = -97 score = 6.94537 sequence = AGACGTCC-(0)-AGATGTGT Site: position = -105 score = 7.52203 sequence = AGACATAT-(0)-AGACGTCC Gene: VAS14_21442: Cystathionine gamma-synthase (EC 2.5.1.48) |
*
Photobacterium profundum SS9 Site: position = -90 score = 6.09709 sequence = GGAAGTGT-(0)-TGACGTCT Site: position = -98 score = 6.95886 sequence = AGACGTCT-(0)-GGAAGTGT Site: position = -106 score = 8.13161 sequence = AGACATAT-(0)-AGACGTCT Gene: PBPRA0261: Cystathionine gamma-synthase (EC 2.5.1.48) |
Cystathionine gamma-synthase (EC 2.5.1.48) |
| metL |
Gene: VC2684: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
Gene: VV1_1365: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
Gene: VIBHAR_00048: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
Gene: VP2764: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
Gene: VSAK1_09468: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
Gene: VS_2893: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
Gene: VF_2266: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
Gene: VSAL_I2748: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
Gene: VAS14_21437: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
Gene: PBPRA0262: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
| CRON 13. | |||||||||||
| metE |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -79 score = 6.29688 sequence = AGCCATCC-(0)-AGACATCT Gene: VC1704: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Vibrio vulnificus CMCP6 Site: position = -255 score = 7.54261 sequence = AAACATCT-(0)-AGACGTCT Site: position = -140 score = 6.29688 sequence = AGCCATCC-(0)-AGACATCT Gene: VV1_2219: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -198 score = 7.74233 sequence = AAACGTCT-(0)-AGACGTCT Site: position = -77 score = 6.29688 sequence = AGCCATCC-(0)-AGACATCT Gene: VIBHAR_02772: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -81 score = 6.29688 sequence = AGCCATCC-(0)-AGACATCT Site: position = -210 score = 6.2111 sequence = GGATATGT-(0)-AAACGTCT Site: position = -202 score = 7.74233 sequence = AAACGTCT-(0)-AGACGTCT Gene: VP1974: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Vibrio shilonii AK1 Site: position = -148 score = 5.62689 sequence = GGATGTGT-(0)-AAACATCT Site: position = -140 score = 6.93303 sequence = AAACATCT-(0)-AGACGTCC Site: position = -35 score = 6.17241 sequence = AGCCATCC-(0)-AGACTGCT Gene: VSAK1_00952: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Vibrio splendidus LGP32 Site: position = -208 score = 7.00475 sequence = AAACGTCT-(0)-AGATGTCC Site: position = -87 score = 6.43223 sequence = AGCCATCC-(0)-AGACGCCT Gene: VS_1145: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Vibrio fischeri ES114 Site: position = -152 score = 7.13901 sequence = AAACATCT-(0)-AGACGGCT Site: position = -31 score = 6.0874 sequence = AGCCATCC-(0)-AAACGGCT Gene: VF_1721: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
|
|
*
Photobacterium profundum SS9 Site: position = -196 score = 5.50408 sequence = GGAAGTGT-(0)-AAACATCT Site: position = -188 score = 7.54261 sequence = AAACATCT-(0)-AGACGTCT Gene: PBPRA1379: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
| CRON 14. | |||||||||||
| metF |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -66 score = 7.35605 sequence = AGCCATAT-(0)-AGACGTCT Site: position = -58 score = 7.2236 sequence = AGACGTCT-(0)-AAACGTCA Gene: VC2685: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
*
Vibrio vulnificus CMCP6 Site: position = -66 score = 7.33362 sequence = AGACGTCT-(0)-AAACGTCG Site: position = -74 score = 7.25019 sequence = GGACATAT-(0)-AGACGTCT Gene: VV1_1366: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -72 score = 7.67109 sequence = AGACATAT-(0)-AGACGTCT Site: position = -64 score = 7.33362 sequence = AGACGTCT-(0)-AAACGTCG Gene: VIBHAR_00047: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -70 score = 7.67109 sequence = AGACATAT-(0)-AGACGTCT Site: position = -62 score = 7.33362 sequence = AGACGTCT-(0)-AAACGTCG Gene: VP2763: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
*
Vibrio shilonii AK1 Site: position = -98 score = 7.2236 sequence = AGACGTCT-(0)-AAACGTCA Site: position = -106 score = 7.67109 sequence = AGACATAT-(0)-AGACGTCT Gene: VSAK1_09463: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
|
*
Vibrio fischeri ES114 Site: position = -86 score = 7.67109 sequence = AGACATAT-(0)-AGACGTCT Gene: VF_2309: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
*
Vibrio salmonicida LFI1238 Site: position = -84 score = 7.15084 sequence = AGACATAT-(0)-AGACGTCC Site: position = -76 score = 5.63489 sequence = AGACGTCC-(0)-AAACATGA Gene: VSAL_I2762: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
|
*
Photobacterium profundum SS9 Site: position = -82 score = 7.67109 sequence = AGACATAT-(0)-AGACGTCT Site: position = -74 score = 7.12247 sequence = AGACGTCT-(0)-AAACGGTT Gene: PBPRA0263: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
| CRON 15. | |||||||||||
| metN |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -107 score = 6.14026 sequence = AGACGTAA-(0)-AAATATCT Site: position = -123 score = 6.84017 sequence = AACCATTT-(0)-AGACGTCT Site: position = -115 score = 7.11232 sequence = AGACGTCT-(0)-AGACGTAA Gene: VC0907: Methionine ABC transporter ATP-binding protein |
*
Vibrio vulnificus CMCP6 Site: position = -114 score = 7.11232 sequence = AGACGTCT-(0)-AGACGTAA Site: position = -106 score = 6.14026 sequence = AGACGTAA-(0)-AAATATCT Site: position = -122 score = 6.98444 sequence = GAACGTTT-(0)-AGACGTCT Gene: VV1_0292: Methionine ABC transporter ATP-binding protein |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -153 score = 7.08138 sequence = ATACATTT-(0)-AGACGTCT Site: position = -145 score = 7.11232 sequence = AGACGTCT-(0)-AGACGTAA Site: position = -137 score = 6.14026 sequence = AGACGTAA-(0)-AAATATCT Gene: VIBHAR_01202: Methionine ABC transporter ATP-binding protein |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -153 score = 7.08138 sequence = ATACATTT-(0)-AGACGTCT Site: position = -145 score = 7.11232 sequence = AGACGTCT-(0)-AGACGTAA Site: position = -137 score = 6.14026 sequence = AGACGTAA-(0)-AAATATCT Gene: VP0706: Methionine ABC transporter ATP-binding protein |
*
Vibrio shilonii AK1 Site: position = -123 score = 6.75284 sequence = TGCCGTTT-(0)-AGACGTCT Site: position = -115 score = 7.11232 sequence = AGACGTCT-(0)-AGACGTAA Site: position = -107 score = 6.14026 sequence = AGACGTAA-(0)-AAATATCT Gene: VSAK1_10548: Methionine ABC transporter ATP-binding protein |
*
Vibrio splendidus LGP32 Site: position = -114 score = 6.79728 sequence = AGCCGTCT-(0)-AGACGTAA Site: position = -106 score = 6.14026 sequence = AGACGTAA-(0)-AAATATCT Gene: VS_2382: Methionine ABC transporter ATP-binding protein |
*
Vibrio fischeri ES114 Site: position = -70 score = 7.11232 sequence = AGACGTCT-(0)-AGACGTAA Site: position = -62 score = 6.14026 sequence = AGACGTAA-(0)-AAATATCT Gene: VF_0686: Methionine ABC transporter ATP-binding protein |
*
Vibrio salmonicida LFI1238 Site: position = -179 score = 6.44855 sequence = ATACGTTT-(0)-AGCCGTCT Site: position = -171 score = 6.79728 sequence = AGCCGTCT-(0)-AGACGTAA Site: position = -163 score = 6.14026 sequence = AGACGTAA-(0)-AAATATCT Gene: VSAL_I0886: Methionine ABC transporter ATP-binding protein |
*
Vibrio angustum S14 Site: position = -172 score = 7.00833 sequence = AGCCATTT-(0)-GGACGTCT Site: position = -164 score = 5.80845 sequence = GGACGTCT-(0)-AGCCGTAA Site: position = -156 score = 5.39568 sequence = AGCCGTAA-(0)-AAATAGCT Gene: VAS14_21086: Methionine ABC transporter ATP-binding protein |
*
Photobacterium profundum SS9 Site: position = -161 score = 5.03914 sequence = TTACGTTT-(0)-AGCCATCT Site: position = -153 score = 5.66418 sequence = AGCCATCT-(0)-AGCCGTAA Site: position = -121 score = 5.45211 sequence = AGCCATCC-(0)-AGACACCC Gene: PBPRA2940: Methionine ABC transporter ATP-binding protein |
Methionine ABC transporter ATP-binding protein |
| metI |
Gene: VC0906: Methionine ABC transporter permease protein |
Gene: VV1_0293: Methionine ABC transporter permease protein |
Gene: VIBHAR_01201: Methionine ABC transporter permease protein |
Gene: VP0705: Methionine ABC transporter permease protein |
Gene: VSAK1_10553: Methionine ABC transporter permease protein |
Gene: VS_2383: Methionine ABC transporter permease protein |
Gene: VF_0685: Methionine ABC transporter permease protein |
Gene: VSAL_I0887: Methionine ABC transporter permease protein |
Gene: VAS14_21081: Methionine ABC transporter permease protein |
Gene: PBPRA2941: Methionine ABC transporter permease protein |
Methionine ABC transporter permease protein |
| metQ |
Gene: VC0905: Methionine ABC transporter substrate-binding protein |
Gene: VV1_0294: Methionine ABC transporter substrate-binding protein |
Gene: VIBHAR_01200: Methionine ABC transporter substrate-binding protein |
Gene: VP0704: Methionine ABC transporter substrate-binding protein |
Gene: VSAK1_10558: Methionine ABC transporter substrate-binding protein |
Gene: VS_2384: Methionine ABC transporter substrate-binding protein |
Gene: VF_0684: Methionine ABC transporter substrate-binding protein |
Gene: VSAL_I0888: Methionine ABC transporter substrate-binding protein |
Gene: VAS14_21076: Methionine ABC transporter substrate-binding protein |
Gene: PBPRA2942: Methionine ABC transporter substrate-binding protein |
Methionine ABC transporter substrate-binding protein |
| CRON 16. | |||||||||||
| metE |
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*2
Vibrio angustum S14 Site: position = -163 score = 6.58796 sequence = AGATGGCT-(0)-AAACGTCT Site: position = -171 score = 7.01103 sequence = AAACATCT-(0)-AGATGGCT Gene: VAS14_04733: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Gene: VAS14_04728: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |