Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of MetJ in Vibrio shilonii AK1

Properties
Regulator type: Transcription factor
TF locus tag: VSAK1_09478
Regulator family: MetJ
Regulation mode: repressor
Biological process: Methionine metabolism; Methionine biosynthesis
Effector: S-adenosylmethionine
Regulog: MetJ - Vibrionales
Statistics of regulated genes:
- Genes 15
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 218 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -48
Score: 7.4
Sequence: AGATGTAT-(0)-AGACGTCC
Position: -40
Score: 5.9
Sequence: AGACGTCC-(0)-AGATGACC
Locus tag: VSAK1_06879
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)

Position: -321
Score: 4.8
Sequence: ATATGGCT-(0)-GGATATCT
Locus tag: VSAK1_13281
Name: btuB
Funciton: TonB-dependent outer membrane transporter for vitamin B12
btuB
TonB-dependent outer membrane transporter for vitamin B12

Position: -180
Score: 8.1
Sequence: AGACATAT-(0)-AGACGTCT
Position: -172
Score: 7.4
Sequence: AGACGTCT-(0)-AGAAGTGT
Position: -164
Score: 6.6
Sequence: AGAAGTGT-(0)-TGACGTCT
Locus tag: VSAK1_09473
Name: metB
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: VSAK1_09468
Name: metL
Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
metB
Cystathionine gamma-synthase (EC 2.5.1.48)
metL
Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)

Position: -92
Score: 7.2
Sequence: AGACGTCT-(0)-AGATGTAG
Locus tag: VSAK1_07864
Name: metK
Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
metK
S-adenosylmethionine synthetase (EC 2.5.1.6)

Position: -123
Score: 6.8
Sequence: TGCCGTTT-(0)-AGACGTCT
Position: -115
Score: 7.1
Sequence: AGACGTCT-(0)-AGACGTAA
Position: -107
Score: 6.1
Sequence: AGACGTAA-(0)-AAATATCT
Locus tag: VSAK1_10548
Name: metN
Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: VSAK1_10553
Name: metI
Funciton: Methionine ABC transporter permease protein
Locus tag: VSAK1_10558
Name: metQ
Funciton: Methionine ABC transporter substrate-binding protein
metN
Methionine ABC transporter ATP-binding protein
metI
Methionine ABC transporter permease protein
metQ
Methionine ABC transporter substrate-binding protein

Position: -73
Score: 6.9
Sequence: AGATTTTT-(0)-AGACGTCT
Position: -65
Score: 7.8
Sequence: AGACGTCT-(0)-AGATTTCT
Locus tag: VSAK1_04630
Name: metH
Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)

Position: -111
Score: 6
Sequence: AGACGTCA-(0)-ACACTTCT
Position: -103
Score: 6.9
Sequence: ACACTTCT-(0)-AGACGTCT
Position: -95
Score: 7.7
Sequence: AGACGTCT-(0)-ATATGTCT
Locus tag: VSAK1_09478
Name: metJ
Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ
metJ
S-adenosylmethionine-responsive transcriptional repressor MetJ

Position: -83
Score: 6.9
Sequence: GGACATTT-(0)-GGACGTCT
Position: -75
Score: 7.1
Sequence: GGACGTCT-(0)-AGACGTTG
Position: -67
Score: 5.9
Sequence: AGACGTTG-(0)-ACATGTCT
Locus tag: VSAK1_25825
Name: metT
Funciton: Methionine transporter MetT, NhaC antiporter family
metT
Methionine transporter MetT, NhaC antiporter family

Position: -247
Score: 5
Sequence: GTACATCA-(0)-AGATGGAT
Locus tag: VSAK1_06235
Name: csd
Funciton: Cysteine desulfurase (EC 2.8.1.7)
csd
Cysteine desulfurase (EC 2.8.1.7)

Position: -178
Score: 6.6
Sequence: AGCAGTCT-(0)-GGATGGCT
Position: -73
Score: 7.5
Sequence: GGACGTCT-(0)-AGATGTTT
Locus tag: VSAK1_00947
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family

Position: -148
Score: 5.6
Sequence: GGATGTGT-(0)-AAACATCT
Position: -140
Score: 6.9
Sequence: AAACATCT-(0)-AGACGTCC
Position: -35
Score: 6.2
Sequence: AGCCATCC-(0)-AGACTGCT
Locus tag: VSAK1_00952
Name: metE
Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)

Position: -106
Score: 7.7
Sequence: AGACATAT-(0)-AGACGTCT
Position: -98
Score: 7.2
Sequence: AGACGTCT-(0)-AAACGTCA
Locus tag: VSAK1_09463
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
metF
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD