Collection of regulogs involved in Methionine metabolism
Type | Phylum | Regulog | Regulons (studied genomes) | Regulatory sites |
---|---|---|---|---|
TF | Firmicutes | HomR - Streptococcaceae | 10 (15) | 24 |
TF | Firmicutes | MtaR - Streptococcaceae | 13 (15) | 72 |
TF | Proteobacteria/Gamma | MdeR - Alteromonadales | 1 (9) | 4 |
TF | Proteobacteria/Gamma | MetJ - Alteromonadales | 9 (9) | 110 |
TF | Proteobacteria/Gamma | MetJ - Enterobacteriales | 12 (12) | 167 |
TF | Proteobacteria/Gamma | MetJ - Pasteurellales | 9 (9) | 50 |
TF | Proteobacteria/Gamma | MetJ - Psychromonadaceae/Aeromonadales | 6 (6) | 84 |
TF | Proteobacteria/Gamma | MetJ - Vibrionales | 10 (10) | 218 |
TF | Proteobacteria/alpha | SahR - Caulobacterales | 4 (4) | 14 |
TF | Proteobacteria/alpha | SahR - Rhizobiales | 10 (15) | 36 |
TF | Proteobacteria/alpha | SahR - Rhodobacterales | 2 (15) | 4 |
TF | Proteobacteria/alpha | SahR - Rhodospirillales | 7 (9) | 17 |
TF | Proteobacteria/alpha | SahR - Sphingomonadales | 7 (7) | 25 |
TF | Proteobacteria/delta | SahR - Desulfovibrionales | 9 (10) | 31 |
TF | Proteobacteria/delta | SahR - Desulfuromonadales | 6 (9) | 6 |
TF | Proteobacteria/gamma | MetJ - Shewanellaceae | 16 (16) | 397 |
TF | Proteobacteria/gamma | SahR - Oceanospirillales/Alteromonadales | 9 (12) | 15 |
TF | Proteobacteria/gamma | SahR - Pseudomonadaceae | 8 (8) | 8 |
TF | Proteobacteria/gamma | SamR - Xanthomonadales | 4 (4) | 17 |
RNA | Actinobacteria | SAH_riboswitch - Mycobacteriaceae | 6 (9) | 6 |
RNA | Alphaproteobacteria | SAM-SAH - Rhodobacterales | 13 (15) | 13 |
RNA | Chlorobi | SAM-Chlorobi - Chlorobiales | 11 (11) | 11 |
RNA | Firmicutes | SMK_box_riboswitch - Lactobacillaceae | 13 (15) | 13 |
RNA | Proteobacteria | SAH_riboswitch - Burkholderia | 8 (8) | 8 |
RNA | Proteobacteria | SAH_riboswitch - Pseudomonadaceae | 7 (8) | 7 |
RNA | Proteobacteria | SAH_riboswitch - Ralstonia | 6 (6) | 6 |
RNA | Proteobacteria/Beta | SAH_riboswitch - Comamonadaceae | 11 (11) | 21 |
RNA | Proteobacteria/Beta | SAH_riboswitch - Various betaproteobacteria | 11 (12) | 14 |
RNA | Proteobacteria/Gamma | SAH_riboswitch - Moraxellaceae | 2 (4) | 2 |
RNA | Proteobacteria/Gamma | SAH_riboswitch - Xanthomonadales | 3 (4) | 3 |