Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog SAM-Chlorobi - Chlorobiales

Properties
Regulator type: RNA regulatory element
Name: SAM-Chlorobi
RFAM: RF01724
Regulation mode:
Biological process: Methionine metabolism
Effector:
Phylum: Chlorobi
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chlorobaculum parvum NCIB 8327 2 1
Chlorobium chlorochromatii CaD3 2 1
Chlorobium ferrooxidans DSM 13031 2 1
Chlorobium limicola DSM 245 2 1
Chlorobium phaeobacteroides BS1 2 1
Chlorobium phaeobacteroides DSM 266 2 1
Chloroherpeton thalassium ATCC 35110 2 1
Pelodictyon luteolum DSM 273 2 1
Pelodictyon phaeoclathratiforme BU-1 2 1
Prosthecochloris aestuarii DSM 271 2 1
Prosthecochloris vibrioformis DSM 265 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
metK
*
Chlorobaculum parvum NCIB 8327

Site:
position = -193
score = 67.48
sequence = TCGGCATCCCCATTA...

Gene: Cpar_0689: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Chlorobium chlorochromatii CaD3

Site:
position = -197
score = 37.61
sequence = GGCATCCCCATTACC...

Gene: Cag_1547: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Chlorobium ferrooxidans DSM 13031

Site:
position = -189
score = 81.13
sequence = TTGACACTCCCATTA...

Gene: CferDRAFT_0054: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Chlorobium limicola DSM 245

Site:
position = -189
score = 89.21
sequence = GGCATCCCCATTACC...

Gene: Clim_1641: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Chlorobium phaeobacteroides BS1

Site:
position = -180
score = 64.25
sequence = GGCATCCCCATTACC...

Gene: Cphamn1_1640: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Chlorobium phaeobacteroides DSM 266

Site:
position = -190
score = 72.23
sequence = TCGGCATCCCCATTA...

Gene: Cpha266_0922: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Chloroherpeton thalassium ATCC 35110

Site:
position = -186
score = 47.08
sequence = GACATCCCCATTATC...

Gene: Ctha_1913: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Pelodictyon luteolum DSM 273

Site:
position = -188
score = 77.82
sequence = AAGGCATCCCCATTA...

Gene: Plut_0672: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Pelodictyon phaeoclathratiforme BU-1

Site:
position = -209
score = 77.55
sequence = GACATCCCCATTACC...

Gene: Ppha_2094: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Prosthecochloris aestuarii DSM 271

Site:
position = -178
score = 68.13
sequence = CAGGCATCCCCATTA...

Gene: Paes_0808: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Prosthecochloris vibrioformis DSM 265

Site:
position = -190
score = 88.01
sequence = AGCATCACCATTATC...

Gene: Cvib_1121: S-adenosylmethionine synthetase (EC 2.5.1.6)
S-adenosylmethionine synthetase (EC 2.5.1.6)
achY
 
Chlorobaculum parvum NCIB 8327

Gene: Cpar_0688: Adenosylhomocysteinase (EC 3.3.1.1)
 
Chlorobium chlorochromatii CaD3

Gene: Cag_1548: Adenosylhomocysteinase (EC 3.3.1.1)
 
Chlorobium ferrooxidans DSM 13031

Gene: CferDRAFT_0053: Adenosylhomocysteinase (EC 3.3.1.1)
 
Chlorobium limicola DSM 245

Gene: Clim_1642: Adenosylhomocysteinase (EC 3.3.1.1)
 
Chlorobium phaeobacteroides BS1

Gene: Cphamn1_1641: Adenosylhomocysteinase (EC 3.3.1.1)
 
Chlorobium phaeobacteroides DSM 266

Gene: Cpha266_0921: Adenosylhomocysteinase (EC 3.3.1.1)
 
Chloroherpeton thalassium ATCC 35110

Gene: Ctha_1914: Adenosylhomocysteinase (EC 3.3.1.1)
 
Pelodictyon luteolum DSM 273

Gene: Plut_0671: Adenosylhomocysteinase (EC 3.3.1.1)
 
Pelodictyon phaeoclathratiforme BU-1

Gene: Ppha_2095: Adenosylhomocysteinase (EC 3.3.1.1)
 
Prosthecochloris aestuarii DSM 271

Gene: Paes_0807: Adenosylhomocysteinase (EC 3.3.1.1)
 
Prosthecochloris vibrioformis DSM 265

Gene: Cvib_1122: Adenosylhomocysteinase (EC 3.3.1.1)
Adenosylhomocysteinase (EC 3.3.1.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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