Statistics of regulated genes

Genome	Genes	Operons
Azoarcus sp. EbN1	3	2
Dechloromonas aromatica RCB	5	2
Thauera sp. MZ1T	4	2
Chromobacterium violaceum ATCC 12472	2	1
Laribacter hongkongensis HLHK9	1	1
Neisseria meningitidis MC58
Methylobacillus flagellatus KT	3	1
Methylophilales bacterium HTCC2181	2	1
Methylotenera mobilis JLW8	3	1
Nitrosomonas europaea ATCC 19718	2	1
Nitrosospira multiformis ATCC 25196	2	1
Thiobacillus denitrificans	3	1

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes													Function
CRON 1.
ahcY	* Azoarcus sp. EbN1 Site: position = -139 score = 47.98 sequence = CTGCCGAGGAGCGCT... Gene: ebA1874: Adenosylhomocysteinase (EC 3.3.1.1)	* Dechloromonas aromatica RCB Site: position = -144 score = 45.68 sequence = ACCTACCGAGGGGCG... Gene: Daro_0186: Adenosylhomocysteinase (EC 3.3.1.1)	* Thauera sp. MZ1T Site: position = -142 score = 17.24 sequence = CGCCCTGCGGCGGGT... Gene: Tmz1t_3842: Adenosylhomocysteinase (EC 3.3.1.1)	* Chromobacterium violaceum ATCC 12472 Site: position = -160 score = 29.14 sequence = CCGAGGAGCGCTGCG... Gene: CV0965: Adenosylhomocysteinase (EC 3.3.1.1)	* Laribacter hongkongensis HLHK9 Site: position = -134 score = 54.2 sequence = GCCGAGGGGCGCTGC... Gene: LHK_00674: Adenosylhomocysteinase (EC 3.3.1.1)	Neisseria meningitidis MC58	* Methylobacillus flagellatus KT Site: position = -197 score = 44.64 sequence = CTCTACCGAGGAACG... Gene: Mfla_0193: Adenosylhomocysteinase (EC 3.3.1.1)	* Methylophilales bacterium HTCC2181 Site: position = -138 score = 30.69 sequence = TATTACCGAGGAACG... Gene: MB2181_00490: Adenosylhomocysteinase (EC 3.3.1.1)	* Methylotenera mobilis JLW8 Site: position = -169 score = 39.78 sequence = TACTTCTGAGGGGCG... Gene: Mmol_2191: Adenosylhomocysteinase (EC 3.3.1.1)	* Nitrosomonas europaea ATCC 19718 Site: position = -93 score = 46.21 sequence = GGTACCGAGGAGCGC... Gene: NE0660: Adenosylhomocysteinase (EC 3.3.1.1)	* Nitrosospira multiformis ATCC 25196 Site: position = -95 score = 59.29 sequence = CCAGACCGAGGAGCG... Gene: Nmul_A2540: Adenosylhomocysteinase (EC 3.3.1.1)	* Thiobacillus denitrificans Site: position = 9 score = 58.48 sequence = CGGTTCCGAGGAGCG... Gene: Tbd_2519: Adenosylhomocysteinase (EC 3.3.1.1)	Adenosylhomocysteinase (EC 3.3.1.1)
PF04020	Azoarcus sp. EbN1	Dechloromonas aromatica RCB Gene: Daro_0185: Predicted membrane protein	Thauera sp. MZ1T	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	Methylobacillus flagellatus KT Gene: Mfla_0192: Predicted membrane protein	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8 Gene: Mmol_2190: Predicted membrane protein	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans Gene: Tbd_2518: Predicted membrane protein	Predicted membrane protein
COG1189	Azoarcus sp. EbN1	Dechloromonas aromatica RCB Gene: Daro_0184: S-adenosyl-L-methionine-dependent RNA binding methyltransferase	Thauera sp. MZ1T Gene: Tmz1t_3843: S-adenosyl-L-methionine-dependent RNA binding methyltransferase	Chromobacterium violaceum ATCC 12472 Gene: CV4301: S-adenosyl-L-methionine-dependent RNA binding methyltransferase	Laribacter hongkongensis HLHK9 Gene: LHK_03150: S-adenosyl-L-methionine-dependent RNA binding methyltransferase	Neisseria meningitidis MC58	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans	S-adenosyl-L-methionine-dependent RNA binding methyltransferase
metF	Azoarcus sp. EbN1 Gene: ebA1875: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Dechloromonas aromatica RCB Gene: Daro_0183: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Thauera sp. MZ1T Gene: Tmz1t_3844: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Chromobacterium violaceum ATCC 12472 Gene: CV0966: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Laribacter hongkongensis HLHK9 Gene: LHK_00541: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Neisseria meningitidis MC58 Gene: NMB0943: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Methylobacillus flagellatus KT Gene: Mfla_0191: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Methylophilales bacterium HTCC2181 Gene: MB2181_00485: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Methylotenera mobilis JLW8 Gene: Mmol_2189: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Nitrosomonas europaea ATCC 19718 Gene: NE0661: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Nitrosospira multiformis ATCC 25196 Gene: Nmul_A2539: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Thiobacillus denitrificans Gene: Tbd_2517: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
CRON 2.
metH	* Azoarcus sp. EbN1 Site: position = -169 score = 48.11 sequence = TTGCTGAGGAGCGCT... Gene: ebA3184: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Dechloromonas aromatica RCB Site: position = -152 score = 60.07 sequence = TTCTGCCGAGGAGCG... Gene: Daro_0046: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Thauera sp. MZ1T Site: position = -149 score = 53.85 sequence = CTGCCGAGGAGCGCT... Gene: Tmz1t_0606: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	Chromobacterium violaceum ATCC 12472	Laribacter hongkongensis HLHK9	Neisseria meningitidis MC58	Methylobacillus flagellatus KT	Methylophilales bacterium HTCC2181	Methylotenera mobilis JLW8	Nitrosomonas europaea ATCC 19718	Nitrosospira multiformis ATCC 25196	Thiobacillus denitrificans Gene: Tbd_0234: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD