Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF04020 gene

Properties
Regulator type: RNA regulatory element
Name: SAH_riboswitch
RFAM: RF01057
Regulation mode:
Biological process: Methionine metabolism
Effector: S-adenosylhomocysteine
Phylum: Proteobacteria/Beta
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Dechloromonas aromatica RCB
Position: -144
Score: 45.68
Sequence: ACCTACCGAGGGGCG...
Locus tag: Daro_0186
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Daro_0185
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: Daro_0184
Name: COG1189
Funciton: S-adenosyl-L-methionine-dependent RNA binding methyltransferase
Locus tag: Daro_0183
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-COG1189-metF -144 45.7 ACCTACCGAGGGGCG... Daro_0186
Methylobacillus flagellatus KT
Position: -197
Score: 44.64
Sequence: CTCTACCGAGGAACG...
Locus tag: Mfla_0193
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Mfla_0192
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: Mfla_0191
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF -197 44.6 CTCTACCGAGGAACG... Mfla_0193
Methylotenera mobilis JLW8
Position: -169
Score: 39.78
Sequence: TACTTCTGAGGGGCG...
Locus tag: Mmol_2191
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Mmol_2190
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: Mmol_2189
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF -169 39.8 TACTTCTGAGGGGCG... Mmol_2191
Thiobacillus denitrificans
Position: 9
Score: 58.48
Sequence: CGGTTCCGAGGAGCG...
Locus tag: Tbd_2519
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Tbd_2518
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: Tbd_2517
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF 9 58.5 CGGTTCCGAGGAGCG... Tbd_2519