Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog SAH_riboswitch - Mycobacteriaceae

Properties
Regulator type: RNA regulatory element
Name: SAH_riboswitch
RFAM: RF01057
Regulation mode:
Biological process: Methionine metabolism
Effector: S-adenosylhomocysteine
Phylum: Actinobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Mycobacterium tuberculosis H37Rv
Mycobacterium leprae TN
Mycobacterium marinum M 1 1
Mycobacterium avium 104 1 1
Mycobacterium sp. JLS 1 1
Mycobacterium vanbaalenii PYR-1
Mycobacterium flavescens PYR-GCK 1 1
Mycobacterium smegmatis str. MC2 155 1 1
Mycobacterium abscessus ATCC 19977 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
metH
 
Mycobacterium tuberculosis H37Rv
 
Mycobacterium leprae TN
*
Mycobacterium marinum M

Site:
position = -95
score = 20.48
sequence = GGGTCGAGAGGCGTT...

Gene: MMAR_4825: 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH
*
Mycobacterium avium 104

Site:
position = -93
score = 28.17
sequence = TGGTCGAGAGGCGTT...

Gene: MAV_2379: 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH
*
Mycobacterium sp. JLS

Site:
position = -107
score = 23.52
sequence = TCTGGTCGAGAGGCG...

Gene: Mjls_3161: 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_3474: 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH
*
Mycobacterium flavescens PYR-GCK

Site:
position = -77
score = 26.19
sequence = GCGTCGAGAGGCGTT...

Gene: Mflv_3053: 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -94
score = 23.13
sequence = CCCGTCGAGAGGCGT...

Gene: MSMEG_4185: 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH
*
Mycobacterium abscessus ATCC 19977

Site:
position = -95
score = 22.73
sequence = TGGTCGAGAGGCGTT...

Gene: MAB_2129: 5-methyltetrahydrofolate--homocysteine methyltransferase, MetH
5-methyltetrahydrofolate--homocysteine methyltransferase, MetH
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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