Regulog SahR - Rhodospirillales

Properties
Regulator type:	Transcription factor
Regulator family:	ArsR
Regulation mode:	repressor
Biological process:	Methionine metabolism
Effector:	S-adenosylhomocysteine
Phylum:	Proteobacteria/alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Rhodospirillales
By trascription factor - SahR/SamR
By TF family - ArsR
By effector - S-adenosylhomocysteine
By pathway - Methionine metabolism

Statistics of regulated genes
Genome	Genes	Operons
Rhodospirillum rubrum ATCC 11170	5	3
Magnetospirillum magnetotacticum MS-1	8	3
Magnetospirillum magneticum AMB-1	2	2
Azospirillum sp. B510	6	2
Rhodospirillum centenum SW	3	2
Gluconacetobacter diazotrophicus PAl 5	3	2
Acetobacter pasteurianus IFO 3283-01
Gluconobacter oxydans 621H
Granulibacter bethesdensis CGDNIH1	4	3

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
metE	* Rhodospirillum rubrum ATCC 11170 Site: position = -377 score = 6.79532 sequence = ATATAAAGATATCTTCATAT Gene: Rru_A1718: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	Magnetospirillum magnetotacticum MS-1	Magnetospirillum magneticum AMB-1	Azospirillum sp. B510	Rhodospirillum centenum SW	* Gluconacetobacter diazotrophicus PAl 5 Site: position = -366 score = 5.06333 sequence = ATATAACAACATCCTTATAT Gene: Gdia_0807: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	Acetobacter pasteurianus IFO 3283-01	Gluconobacter oxydans 621H	* Granulibacter bethesdensis CGDNIH1 Site: position = -330 score = 6.56162 sequence = ACATAAAGATATATTTATAT Gene: GbCGDNIH1_0783: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)

CRON 2.
ahcY	* Rhodospirillum rubrum ATCC 11170 Site: position = -70 score = 7.18643 sequence = ATATAAAGATATCTTTATAT Gene: Rru_A3444: Adenosylhomocysteinase (EC 3.3.1.1)	3 Magnetospirillum magnetotacticum MS-1* Site: position = -89 score = 7.06142 sequence = ACATAAAGATATCTTTATAT Gene: Magn03009486: Adenosylhomocysteinase (EC 3.3.1.1) Gene: Magn03003856: Adenosylhomocysteinase (EC 3.3.1.1) Gene: Magn03003857: Adenosylhomocysteinase (EC 3.3.1.1)	* Magnetospirillum magneticum AMB-1 Site: position = -89 score = 7.06142 sequence = ACATAAAGATATCTTTATAT Gene: amb4391: Adenosylhomocysteinase (EC 3.3.1.1)	* Azospirillum sp. B510 Site: position = -134 score = 6.62798 sequence = ACATAAAGATATCTTTATGC Gene: AZL_026520: Adenosylhomocysteinase (EC 3.3.1.1)	* Rhodospirillum centenum SW Site: position = -163 score = 6.62798 sequence = ACATAAAGATATCTTTATGC Gene: RC1_2714: Adenosylhomocysteinase (EC 3.3.1.1)	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_2130: Adenosylhomocysteinase (EC 3.3.1.1)	Acetobacter pasteurianus IFO 3283-01 Gene: APA01_07710: Adenosylhomocysteinase (EC 3.3.1.1)	Gluconobacter oxydans 621H Gene: GOX1078: Adenosylhomocysteinase (EC 3.3.1.1)	* Granulibacter bethesdensis CGDNIH1 Site: position = -23 score = 6.0179 sequence = ATATAAATATATCCTTATGT Gene: GbCGDNIH1_0064: Adenosylhomocysteinase (EC 3.3.1.1)	Adenosylhomocysteinase (EC 3.3.1.1)

CRON 3.
sahR	* Rhodospirillum rubrum ATCC 11170 Site: position = -88 score = 7.18643 sequence = ATATAAAGATATCTTTATAT Gene: Rru_A1529: Transcriptional regulator of methionine metabolism, ArsR family	2 Magnetospirillum magnetotacticum MS-1* Site: position = -46 score = 6.59176 sequence = GCATAAAGATATGTTTATAT Gene: Magn03009308: Transcriptional regulator of methionine metabolism, ArsR family Site: position = -16 score = 6.93642 sequence = ACATAAAGATATCTTTATGT Gene: Magn03007315: Transcriptional regulator of methionine metabolism, ArsR family	* Magnetospirillum magneticum AMB-1 Site: position = -18 score = 6.59176 sequence = GCATAAAGATATGTTTATAT Gene: amb0432: Transcriptional regulator of methionine metabolism, ArsR family	* Azospirillum sp. B510 Site: position = -60 score = 6.75299 sequence = GCATAAAGATATCTTTATAT Gene: AZL_009180: Transcriptional regulator of methionine metabolism, ArsR family	* Rhodospirillum centenum SW Site: position = -133 score = 6.40884 sequence = TCATAAAGATATCTTTATGT Gene: RC1_2051: Transcriptional regulator of methionine metabolism, ArsR family	* Gluconacetobacter diazotrophicus PAl 5 Site: position = -30 score = 5.06333 sequence = ATATAAGGATGTTGTTATAT Gene: Gdia_0808: Transcriptional regulator of methionine metabolism, ArsR family	Acetobacter pasteurianus IFO 3283-01	Gluconobacter oxydans 621H	* Granulibacter bethesdensis CGDNIH1 Site: position = -41 score = 6.93642 sequence = ACATAAAGATATCTTTATGT Gene: GbCGDNIH1_0152: Transcriptional regulator of methionine metabolism, ArsR family	Transcriptional regulator of methionine metabolism, ArsR family
metF	Rhodospirillum rubrum ATCC 11170 Gene: Rru_A1530: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	2 Magnetospirillum magnetotacticum MS-1 Gene: Magn03009307: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Gene: Magn03007314: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Magnetospirillum magneticum AMB-1	Azospirillum sp. B510 Gene: AZL_009190: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Rhodospirillum centenum SW Gene: RC1_2050: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_0809: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Acetobacter pasteurianus IFO 3283-01	Gluconobacter oxydans 621H Gene: GOX2207: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Granulibacter bethesdensis CGDNIH1 Gene: GbCGDNIH1_0206: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
AZL_009200	Rhodospirillum rubrum ATCC 11170	Magnetospirillum magnetotacticum MS-1	Magnetospirillum magneticum AMB-1	Azospirillum sp. B510 Gene: AZL_009200: hypothetical protein	Rhodospirillum centenum SW	Gluconacetobacter diazotrophicus PAl 5	Acetobacter pasteurianus IFO 3283-01	Gluconobacter oxydans 621H	Granulibacter bethesdensis CGDNIH1	hypothetical protein
AZL_009210	Rhodospirillum rubrum ATCC 11170	Magnetospirillum magnetotacticum MS-1	Magnetospirillum magneticum AMB-1	Azospirillum sp. B510 Gene: AZL_009210: hypothetical protein	Rhodospirillum centenum SW	Gluconacetobacter diazotrophicus PAl 5	Acetobacter pasteurianus IFO 3283-01	Gluconobacter oxydans 621H	Granulibacter bethesdensis CGDNIH1	hypothetical protein
metH	Rhodospirillum rubrum ATCC 11170 Gene: Rru_A1531: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	3 Magnetospirillum magnetotacticum MS-1 Gene: Magn03009306: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Gene: Magn03007313: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Gene: Magn03007312: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	Magnetospirillum magneticum AMB-1 Gene: amb0429: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	Azospirillum sp. B510 Gene: AZL_009220: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	Rhodospirillum centenum SW	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_2881: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	Acetobacter pasteurianus IFO 3283-01 Gene: APA01_24490: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	Gluconobacter oxydans 621H Gene: GOX2074: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	Granulibacter bethesdensis CGDNIH1 Gene: GbCGDNIH1_0151: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog SahR - Rhodospirillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --