Regulog SahR - Rhodospirillales
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Methionine metabolism |
| Effector: | S-adenosylhomocysteine |
| Phylum: | Proteobacteria/alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By trascription factor - SahR/SamR
- By TF family - ArsR
- By effector - S-adenosylhomocysteine
- By pathway - Methionine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Rhodospirillum rubrum ATCC 11170 | 5 | 3 |
| Magnetospirillum magnetotacticum MS-1 | 8 | 3 |
| Magnetospirillum magneticum AMB-1 | 2 | 2 |
| Azospirillum sp. B510 | 6 | 2 |
| Rhodospirillum centenum SW | 3 | 2 |
| Gluconacetobacter diazotrophicus PAl 5 | 3 | 2 |
| Acetobacter pasteurianus IFO 3283-01 | ||
| Gluconobacter oxydans 621H | ||
| Granulibacter bethesdensis CGDNIH1 | 4 | 3 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| metE |
*
Rhodospirillum rubrum ATCC 11170 Site: position = -377 score = 6.79532 sequence = ATATAAAGATATCTTCATAT Gene: Rru_A1718: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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*
Gluconacetobacter diazotrophicus PAl 5 Site: position = -366 score = 5.06333 sequence = ATATAACAACATCCTTATAT Gene: Gdia_0807: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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*
Granulibacter bethesdensis CGDNIH1 Site: position = -330 score = 6.56162 sequence = ACATAAAGATATATTTATAT Gene: GbCGDNIH1_0783: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
| CRON 2. | ||||||||||
| ahcY |
*
Rhodospirillum rubrum ATCC 11170 Site: position = -70 score = 7.18643 sequence = ATATAAAGATATCTTTATAT Gene: Rru_A3444: Adenosylhomocysteinase (EC 3.3.1.1) |
*3
Magnetospirillum magnetotacticum MS-1 Site: position = -89 score = 7.06142 sequence = ACATAAAGATATCTTTATAT Gene: Magn03009486: Adenosylhomocysteinase (EC 3.3.1.1) Gene: Magn03003856: Adenosylhomocysteinase (EC 3.3.1.1) Gene: Magn03003857: Adenosylhomocysteinase (EC 3.3.1.1) |
*
Magnetospirillum magneticum AMB-1 Site: position = -89 score = 7.06142 sequence = ACATAAAGATATCTTTATAT Gene: amb4391: Adenosylhomocysteinase (EC 3.3.1.1) |
*
Azospirillum sp. B510 Site: position = -134 score = 6.62798 sequence = ACATAAAGATATCTTTATGC Gene: AZL_026520: Adenosylhomocysteinase (EC 3.3.1.1) |
*
Rhodospirillum centenum SW Site: position = -163 score = 6.62798 sequence = ACATAAAGATATCTTTATGC Gene: RC1_2714: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: Gdia_2130: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: APA01_07710: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: GOX1078: Adenosylhomocysteinase (EC 3.3.1.1) |
*
Granulibacter bethesdensis CGDNIH1 Site: position = -23 score = 6.0179 sequence = ATATAAATATATCCTTATGT Gene: GbCGDNIH1_0064: Adenosylhomocysteinase (EC 3.3.1.1) |
Adenosylhomocysteinase (EC 3.3.1.1) |
| CRON 3. | ||||||||||
| sahR |
*
Rhodospirillum rubrum ATCC 11170 Site: position = -88 score = 7.18643 sequence = ATATAAAGATATCTTTATAT Gene: Rru_A1529: Transcriptional regulator of methionine metabolism, ArsR family |
*2
Magnetospirillum magnetotacticum MS-1 Site: position = -46 score = 6.59176 sequence = GCATAAAGATATGTTTATAT Gene: Magn03009308: Transcriptional regulator of methionine metabolism, ArsR family Site: position = -16 score = 6.93642 sequence = ACATAAAGATATCTTTATGT Gene: Magn03007315: Transcriptional regulator of methionine metabolism, ArsR family |
*
Magnetospirillum magneticum AMB-1 Site: position = -18 score = 6.59176 sequence = GCATAAAGATATGTTTATAT Gene: amb0432: Transcriptional regulator of methionine metabolism, ArsR family |
*
Azospirillum sp. B510 Site: position = -60 score = 6.75299 sequence = GCATAAAGATATCTTTATAT Gene: AZL_009180: Transcriptional regulator of methionine metabolism, ArsR family |
*
Rhodospirillum centenum SW Site: position = -133 score = 6.40884 sequence = TCATAAAGATATCTTTATGT Gene: RC1_2051: Transcriptional regulator of methionine metabolism, ArsR family |
*
Gluconacetobacter diazotrophicus PAl 5 Site: position = -30 score = 5.06333 sequence = ATATAAGGATGTTGTTATAT Gene: Gdia_0808: Transcriptional regulator of methionine metabolism, ArsR family |
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*
Granulibacter bethesdensis CGDNIH1 Site: position = -41 score = 6.93642 sequence = ACATAAAGATATCTTTATGT Gene: GbCGDNIH1_0152: Transcriptional regulator of methionine metabolism, ArsR family |
Transcriptional regulator of methionine metabolism, ArsR family |
| metF |
Gene: Rru_A1530: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
2
Magnetospirillum magnetotacticum MS-1 Gene: Magn03009307: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Gene: Magn03007314: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
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Gene: AZL_009190: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: RC1_2050: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: Gdia_0809: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
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Gene: GOX2207: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: GbCGDNIH1_0206: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
| AZL_009200 |
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Gene: AZL_009200: hypothetical protein |
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hypothetical protein |
| AZL_009210 |
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Gene: AZL_009210: hypothetical protein |
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hypothetical protein |
| metH |
Gene: Rru_A1531: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
3
Magnetospirillum magnetotacticum MS-1 Gene: Magn03009306: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Gene: Magn03007313: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Gene: Magn03007312: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: amb0429: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: AZL_009220: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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Gene: Gdia_2881: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: APA01_24490: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: GOX2074: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: GbCGDNIH1_0151: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |