Regulog SAH_riboswitch - Xanthomonadales
| Regulator type: | RNA regulatory element |
| Name: | SAH_riboswitch |
| RFAM: | RF01057 |
| Regulation mode: | |
| Biological process: | Methionine metabolism |
| Effector: | S-adenosylhomocysteine |
| Phylum: | Proteobacteria/Gamma |
Member of regulog collections
- By taxonomy - Xanthomonadales
- By RNA motif - SAH_riboswitch
- By effector - S-adenosylhomocysteine
- By pathway - Methionine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Stenotrophomonas maltophilia K279a | 1 | 1 |
| Xanthomonas axonopodis pv. citri str. 306 | 1 | 1 |
| Xanthomonas campestris pv. campestris str. ATCC 33913 | 1 | 1 |
| Xylella fastidiosa 9a5c |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| ahcY |
*
Stenotrophomonas maltophilia K279a Site: position = -121 score = 50.63 sequence = CCCTGCCGAGGGGCG... Gene: Smlt0775: Adenosylhomocysteinase (EC 3.3.1.1) |
*
Xanthomonas axonopodis pv. citri str. 306 Site: position = -145 score = 37.1 sequence = TCTCGTCGAGGGGCG... Gene: XAC0804: Adenosylhomocysteinase (EC 3.3.1.1) |
*
Xanthomonas campestris pv. campestris str. ATCC 33913 Site: position = -146 score = 40.83 sequence = CCTCGTCGAGGGGCG... Gene: XCC0752: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: XF1037: Adenosylhomocysteinase (EC 3.3.1.1) |
Adenosylhomocysteinase (EC 3.3.1.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |