Regulog SahR - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Methionine metabolism |
| Effector: | S-adenosylhomocysteine |
| Phylum: | Proteobacteria/alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - SahR/SamR
- By TF family - ArsR
- By effector - S-adenosylhomocysteine
- By pathway - Methionine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Sinorhizobium meliloti 1021 | 6 | 5 |
| Rhizobium sp. NGR234 | 6 | 5 |
| Rhizobium leguminosarum bv. viciae 3841 | 5 | 4 |
| Rhizobium etli CFN 42 | 5 | 4 |
| Agrobacterium tumefaciens str. C58 (Cereon) | 5 | 4 |
| Mesorhizobium sp. BNC1 | 4 | 3 |
| Mesorhizobium loti MAFF303099 | 5 | 4 |
| Brucella melitensis 16M | 4 | 3 |
| Bartonella quintana str. Toulouse | ||
| Rhodopseudomonas palustris CGA009 | ||
| Bradyrhizobium japonicum USDA 110 | ||
| Bradyrhizobium sp. BTAi1 | ||
| Nitrobacter winogradskyi Nb-255 | ||
| Azorhizobium caulinodans ORS 571 | 4 | 2 |
| Xanthobacter autotrophicus Py2 | 4 | 2 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| metH2 |
Gene: SMc04342: 5-methyltetrahydrofolate S-homocysteine methyltransferase |
Gene: NGR_c18460: 5-methyltetrahydrofolate S-homocysteine methyltransferase |
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Mesorhizobium loti MAFF303099 Site: position = -37 score = 6.25946 sequence = ATATAAAGAACTCTTTATAT Gene: mlr1243: 5-methyltetrahydrofolate S-homocysteine methyltransferase |
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5-methyltetrahydrofolate S-homocysteine methyltransferase |
| CRON 2. | ||||||||||||||||
| bhmT |
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Sinorhizobium meliloti 1021 Site: position = -53 score = 7.06142 sequence = ACATAAAGATATCTTTATAT Gene: SMc04325: Betaine--homocysteine S-methyltransferase (EC 2.1.1.5) |
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Rhizobium sp. NGR234 Site: position = -10 score = 6.9002 sequence = ACATAAAGATATGTTTATAT Gene: NGR_c18290: Betaine--homocysteine S-methyltransferase (EC 2.1.1.5) |
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Mesorhizobium loti MAFF303099 Site: position = -54 score = 6.13446 sequence = ACATAAAGACTTCTTTATAT Gene: mlr1220: Betaine--homocysteine S-methyltransferase (EC 2.1.1.5) |
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Betaine--homocysteine S-methyltransferase (EC 2.1.1.5) |
| CRON 3. | ||||||||||||||||
| sahR |
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Sinorhizobium meliloti 1021 Site: position = -36 score = 6.77519 sequence = ACATAAACATATCTTTATGT Gene: SMc01842: Transcriptional regulator of methionine metabolism, ArsR family |
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Rhizobium sp. NGR234 Site: position = -37 score = 6.77519 sequence = ACATAAACATATCTTTATGT Gene: NGR_c21320: Transcriptional regulator of methionine metabolism, ArsR family |
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Rhizobium leguminosarum bv. viciae 3841 Site: position = -36 score = 6.93642 sequence = ACATAAAGATATCTTTATGT Gene: RL3332: Transcriptional regulator of methionine metabolism, ArsR family |
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Rhizobium etli CFN 42 Site: position = -33 score = 7.06142 sequence = ACATAAAGATATCTTTATAT Gene: RHE_CH02872: Transcriptional regulator of methionine metabolism, ArsR family |
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Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -47 score = 7.06142 sequence = ACATAAAGATATCTTTATAT Gene: Atu2124: Transcriptional regulator of methionine metabolism, ArsR family |
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Mesorhizobium sp. BNC1 Site: position = -36 score = 7.0252 sequence = ATATAAACATATCTTTATAT Gene: Meso_2029: Transcriptional regulator of methionine metabolism, ArsR family |
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Mesorhizobium loti MAFF303099 Site: position = -58 score = 6.73897 sequence = ACATAAACATATGTTTATAT Gene: mll1589: Transcriptional regulator of methionine metabolism, ArsR family |
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Brucella melitensis 16M Site: position = -45 score = 7.0252 sequence = ATATAAACATATCTTTATAT Gene: BMEI0558: Transcriptional regulator of methionine metabolism, ArsR family |
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Azorhizobium caulinodans ORS 571 Site: position = -16 score = 7.06142 sequence = ATATAAAGATATCTTTATGT Gene: AZC_4339: Transcriptional regulator of methionine metabolism, ArsR family |
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Xanthobacter autotrophicus Py2 Site: position = 14 score = 7.06142 sequence = ATATAAAGATATCTTTATGT Gene: Xaut_2830: Transcriptional regulator of methionine metabolism, ArsR family |
Transcriptional regulator of methionine metabolism, ArsR family |
| metF |
Gene: SMc01843: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: NGR_c21310: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: RL3331: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: RHE_CH02871: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: Atu2123: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: Meso_2028: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: mll1587: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: BMEI0559: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
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Gene: RPA3701: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: bll1419: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: BBta_7060: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: Nwi_0284: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: AZC_4340: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: Xaut_2831: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
| metH |
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Sinorhizobium meliloti 1021 Site: position = -66 score = 6.93642 sequence = ACATAAAGATATCTTTATGT Gene: SMc03112: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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Rhizobium sp. NGR234 Site: position = -67 score = 6.93642 sequence = ACATAAAGATATCTTTATGT Gene: NGR_c30540: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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Rhizobium leguminosarum bv. viciae 3841 Site: position = -123 score = 6.93642 sequence = ACATAAAGATATCTTTATGT Gene: RL3362: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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Rhizobium etli CFN 42 Site: position = -18 score = 6.93642 sequence = ACATAAAGATATCTTTATGT Gene: RHE_CH02901: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -66 score = 6.77519 sequence = ACATAAACATATCTTTATGT Gene: Atu2155: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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Mesorhizobium sp. BNC1 Site: position = -53 score = 6.93642 sequence = ACATAAAGATATCTTTATGT Gene: Meso_0328: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
2
Mesorhizobium loti MAFF303099 Gene: mll6206: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Gene: msl6205: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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Brucella melitensis 16M Site: position = -140 score = 6.77519 sequence = ACATAAAGATATGTTTATGT Gene: BMEI1759: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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Gene: RPA3702: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: bll1418: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: BBta_7061: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: Nwi_0283: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: AZC_4341: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: Xaut_2832: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
| CRON 4. | ||||||||||||||||
| ahcY |
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Sinorhizobium meliloti 1021 Site: position = -145 score = 6.11472 sequence = ATATAAAGACCTCTTTATAT Gene: SMc02755: Adenosylhomocysteinase (EC 3.3.1.1) |
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Rhizobium sp. NGR234 Site: position = -97 score = 6.11472 sequence = ATATAAAGACCTCTTTATAT Gene: NGR_c33880: Adenosylhomocysteinase (EC 3.3.1.1) |
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Rhizobium leguminosarum bv. viciae 3841 Site: position = -133 score = 6.25946 sequence = ATATAAAGACTTCTTTATAT Gene: RL0031: Adenosylhomocysteinase (EC 3.3.1.1) |
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Rhizobium etli CFN 42 Site: position = -122 score = 6.25946 sequence = ATATAAAGACTTCTTTATAT Gene: RHE_CH00031: Adenosylhomocysteinase (EC 3.3.1.1) |
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Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -111 score = 6.13446 sequence = ACATAAAGACTTCTTTATAT Gene: Atu0029: Adenosylhomocysteinase (EC 3.3.1.1) |
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Mesorhizobium sp. BNC1 Site: position = -106 score = 5.99754 sequence = GAATAAAGATTTCTTTATAT Gene: Meso_3576: Adenosylhomocysteinase (EC 3.3.1.1) |
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Mesorhizobium loti MAFF303099 Site: position = -143 score = 5.99754 sequence = GGATAAAGATTTCTTTATAT Gene: mll5088: Adenosylhomocysteinase (EC 3.3.1.1) |
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Brucella melitensis 16M Site: position = -112 score = 6.32566 sequence = GTATAAAGATTTGTTTATAT Gene: BMEI2029: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: BQ00290: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: RPA4015: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: bll5944: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: BBta_5698: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: Nwi_2377: Adenosylhomocysteinase (EC 3.3.1.1) |
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Azorhizobium caulinodans ORS 571 Site: position = -81 score = 6.63409 sequence = ATATAAACATTTCTTTATAT Gene: AZC_4042: Adenosylhomocysteinase (EC 3.3.1.1) |
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Xanthobacter autotrophicus Py2 Site: position = -107 score = 6.09037 sequence = ATATAAGCATTTCTTTATAT Gene: Xaut_0186: Adenosylhomocysteinase (EC 3.3.1.1) |
Adenosylhomocysteinase (EC 3.3.1.1) |
| metK |
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Sinorhizobium meliloti 1021 Site: position = -94 score = 6.56162 sequence = ATATAAAGATATATTTATGT Gene: SMc01109: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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Rhizobium sp. NGR234 Site: position = -93 score = 6.56162 sequence = ATATAAAGATATATTTATGT Gene: NGR_c00480: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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Rhizobium leguminosarum bv. viciae 3841 Site: position = -94 score = 6.56162 sequence = ATATAAAGATATATTTATGT Gene: RL0389: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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Rhizobium etli CFN 42 Site: position = -94 score = 6.56162 sequence = ATATAAAGATATATTTATGT Gene: RHE_CH00370: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -91 score = 6.43662 sequence = ACATAAAGATATATTTATGT Gene: Atu0362: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: Meso_3924: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: mlr5545: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: BMEI1970: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: BQ02080: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: RPA4016: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: bll5945: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: BBta_5699: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: Nwi_2378: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: AZC_0014: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: Xaut_1816: S-adenosylmethionine synthetase (EC 2.5.1.6) |
S-adenosylmethionine synthetase (EC 2.5.1.6) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |