Statistics of regulated genes

Genome	Genes	Operons
Acidovorax avenae subsp. citrulli AAC00-1	4	2
Acidovorax sp. JS42	4	2
Comamonas testosteroni KF-1	4	2
Delftia acidovorans SPH-1	4	2
Leptothrix cholodnii SP-6	4	2
Methylibium petroleiphilum PM1	4	2
Polaromonas naphthalenivorans CJ2	4	2
Polaromonas sp. JS666	4	2
Rhodoferax ferrireducens DSM 15236	4	2
Variovorax paradoxus S110	4	2
Verminephrobacter eiseniae EF01-2	3	1

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes												Function
CRON 1.
metH	* Acidovorax avenae subsp. citrulli AAC00-1 Site: position = -143 score = 34.64 sequence = CCTCCGAGGAGCGTT... Gene: Aave_0214: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Acidovorax sp. JS42 Site: position = -202 score = 25.89 sequence = TTCCCGAGGAGCGCT... Gene: Ajs_0147: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Comamonas testosteroni KF-1 Site: position = -145 score = 51.79 sequence = CCCCCGAGGAGCGCT... Gene: CtesDRAFT_4006: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Delftia acidovorans SPH-1 Site: position = -152 score = 23.32 sequence = GCCCGAGGAGCGTTG... Gene: Daci_0232: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Leptothrix cholodnii SP-6 Site: position = -155 score = 45.12 sequence = TCCCCGAGGAGCGTT... Gene: Lcho_3270: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Methylibium petroleiphilum PM1 Site: position = -163 score = 41.2 sequence = TGCTCGAGGAGCGTT... Gene: Mpe_A0168: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Polaromonas naphthalenivorans CJ2 Site: position = -106 score = 49.98 sequence = AACTCAAGGAGCGTT... Gene: Pnap_0117: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Polaromonas sp. JS666 Site: position = -110 score = 48.54 sequence = AACCCAAGGAGCGTT... Gene: Bpro_0174: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Rhodoferax ferrireducens DSM 15236 Site: position = -93 score = 55.57 sequence = CTTCCAAGGAGCGTT... Gene: Rfer_0466: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	* Variovorax paradoxus S110 Site: position = -133 score = 35.52 sequence = TTCCAAGGAGCGTTG... Gene: Vapar_0171: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	Verminephrobacter eiseniae EF01-2 Gene: Veis_0014: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
CRON 2.
ahcY	* Acidovorax avenae subsp. citrulli AAC00-1 Site: position = -165 score = 42.53 sequence = CCCTACCGAGGAGCG... Gene: Aave_4060: Adenosylhomocysteinase (EC 3.3.1.1)	* Acidovorax sp. JS42 Site: position = -147 score = 60.01 sequence = TTTCCGAGGAGCGTT... Gene: Ajs_0618: Adenosylhomocysteinase (EC 3.3.1.1)	* Comamonas testosteroni KF-1 Site: position = -171 score = 45.25 sequence = CATCCGAGGAGCGTT... Gene: CtesDRAFT_4458: Adenosylhomocysteinase (EC 3.3.1.1)	* Delftia acidovorans SPH-1 Site: position = -156 score = 52.24 sequence = CCTCTCCGAGGAGCG... Gene: Daci_5919: Adenosylhomocysteinase (EC 3.3.1.1)	* Leptothrix cholodnii SP-6 Site: position = -175 score = 55.51 sequence = CTGTTTCGAGGAGCG... Gene: Lcho_0119: Adenosylhomocysteinase (EC 3.3.1.1)	* Methylibium petroleiphilum PM1 Site: position = -148 score = 63.09 sequence = CTTTCGAGGAGCGTT... Gene: Mpe_A3286: Adenosylhomocysteinase (EC 3.3.1.1)	* Polaromonas naphthalenivorans CJ2 Site: position = -176 score = 50.19 sequence = CTCCTGAGGAGCGTT... Gene: Pnap_0489: Adenosylhomocysteinase (EC 3.3.1.1)	* Polaromonas sp. JS666 Site: position = -173 score = 52.7 sequence = GCTTCCTGAGGAGCG... Gene: Bpro_4132: Adenosylhomocysteinase (EC 3.3.1.1)	* Rhodoferax ferrireducens DSM 15236 Site: position = -187 score = 43.26 sequence = TTTCCGAGGAGCGTT... Gene: Rfer_0652: Adenosylhomocysteinase (EC 3.3.1.1)	* Variovorax paradoxus S110 Site: position = -136 score = 45.06 sequence = CGGTTCCGAGGAGCG... Gene: Vapar_4683: Adenosylhomocysteinase (EC 3.3.1.1)	* Verminephrobacter eiseniae EF01-2 Site: position = -155 score = 46.24 sequence = GCTCCGAGGAGCGTT... Gene: Veis_0656: Adenosylhomocysteinase (EC 3.3.1.1)	Adenosylhomocysteinase (EC 3.3.1.1)
COG1189	Acidovorax avenae subsp. citrulli AAC00-1 Gene: Aave_4059: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	Acidovorax sp. JS42 Gene: Ajs_0619: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	Comamonas testosteroni KF-1 Gene: CtesDRAFT_4459: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	Delftia acidovorans SPH-1 Gene: Daci_5918: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	Leptothrix cholodnii SP-6 Gene: Lcho_0118: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	Methylibium petroleiphilum PM1 Gene: Mpe_A3287: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	Polaromonas naphthalenivorans CJ2 Gene: Pnap_0490: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	Polaromonas sp. JS666 Gene: Bpro_4131: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	Rhodoferax ferrireducens DSM 15236 Gene: Rfer_0653: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	Variovorax paradoxus S110 Gene: Vapar_4682: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	Verminephrobacter eiseniae EF01-2 Gene: Veis_0655: S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase	S-adenosyl-L-methionine-dependent ribosomal RNA methyltransferase
metF	Acidovorax avenae subsp. citrulli AAC00-1 Gene: Aave_4058: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Acidovorax sp. JS42 Gene: Ajs_0620: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Comamonas testosteroni KF-1 Gene: CtesDRAFT_4460: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Delftia acidovorans SPH-1 Gene: Daci_5917: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Leptothrix cholodnii SP-6 Gene: Lcho_0117: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Methylibium petroleiphilum PM1 Gene: Mpe_A3288: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Polaromonas naphthalenivorans CJ2 Gene: Pnap_0491: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Polaromonas sp. JS666 Gene: Bpro_4130: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Rhodoferax ferrireducens DSM 15236 Gene: Rfer_0654: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Variovorax paradoxus S110 Gene: Vapar_4681: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	Verminephrobacter eiseniae EF01-2 Gene: Veis_0654: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD