Regulog SAH_riboswitch - Moraxellaceae
| Regulator type: | RNA regulatory element |
| Name: | SAH_riboswitch |
| RFAM: | RF01057 |
| Regulation mode: | |
| Biological process: | Methionine metabolism |
| Effector: | S-adenosylhomocysteine |
| Phylum: | Proteobacteria/Gamma |
Member of regulog collections
- By taxonomy - Moraxellaceae
- By RNA motif - SAH_riboswitch
- By effector - S-adenosylhomocysteine
- By pathway - Methionine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Acinetobacter baumannii AB0057 | 3 | 1 |
| Acinetobacter sp. ADP1 | 3 | 1 |
| Psychrobacter arcticum 273-4 | ||
| Psychrobacter sp. PRwf-1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| ahcY |
*
Acinetobacter baumannii AB0057 Site: position = -138 score = 32.8 sequence = TAGTCGAGGGATGCT... Gene: AB57_2767: Adenosylhomocysteinase (EC 3.3.1.1) |
*
Acinetobacter sp. ADP1 Site: position = -127 score = 29.38 sequence = TAGTCGAGGGATGCT... Gene: ACIAD2282: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: Psyc_0968: Adenosylhomocysteinase (EC 3.3.1.1) |
Gene: PsycPRwf_0915: Adenosylhomocysteinase (EC 3.3.1.1) |
Adenosylhomocysteinase (EC 3.3.1.1) |
| metF |
Gene: AB57_2768: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: ACIAD2283: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: Psyc_0967: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: PsycPRwf_0914: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
| COG1385 |
Gene: AB57_2769: Ribosomal RNA small subunit methyltransferase E |
Gene: ACIAD2284: Ribosomal RNA small subunit methyltransferase E |
Gene: Psyc_0966: Ribosomal RNA small subunit methyltransferase E |
Gene: PsycPRwf_0913: Ribosomal RNA small subunit methyltransferase E |
Ribosomal RNA small subunit methyltransferase E |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |