Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of MetJ in Vibrio parahaemolyticus RIMD 2210633

Properties
Regulator type: Transcription factor
TF locus tag: VP2766
Regulator family: MetJ
Regulation mode: repressor
Biological process: Methionine metabolism; Methionine biosynthesis
Effector: S-adenosylmethionine
Regulog: MetJ - Vibrionales
Statistics of regulated genes:
- Genes 18
- Operons 13
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 218 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -151
Score: 8.1
Sequence: AGACATAT-(0)-AGACGTCT
Position: -143
Score: 7.4
Sequence: AGACGTCT-(0)-AGAAGTGT
Position: -135
Score: 6.6
Sequence: AGAAGTGT-(0)-TGACGTCT
Locus tag: VP2765
Name: metB
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: VP2764
Name: metL
Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
metB
Cystathionine gamma-synthase (EC 2.5.1.48)
metL
Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)

Position: -36
Score: 7.5
Sequence: AGCCGTAT-(0)-GGACGTCT
Locus tag: VP0379
Name: metQ2
Funciton: Methionine ABC transporter substrate-binding protein
metQ2
Methionine ABC transporter substrate-binding protein

Position: -70
Score: 7.7
Sequence: AGACATAT-(0)-AGACGTCT
Position: -62
Score: 7.3
Sequence: AGACGTCT-(0)-AAACGTCG
Locus tag: VP2763
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
metF
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)

Position: -153
Score: 7.1
Sequence: ATACATTT-(0)-AGACGTCT
Position: -145
Score: 7.1
Sequence: AGACGTCT-(0)-AGACGTAA
Position: -137
Score: 6.1
Sequence: AGACGTAA-(0)-AAATATCT
Locus tag: VP0706
Name: metN
Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: VP0705
Name: metI
Funciton: Methionine ABC transporter permease protein
Locus tag: VP0704
Name: metQ
Funciton: Methionine ABC transporter substrate-binding protein
metN
Methionine ABC transporter ATP-binding protein
metI
Methionine ABC transporter permease protein
metQ
Methionine ABC transporter substrate-binding protein

Position: -45
Score: 7.9
Sequence: AGAAGTAT-(0)-AGACGTCT
Locus tag: VP1751
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)

Position: -21
Score: 7.4
Sequence: AGCCATTT-(0)-AGACGTCT
Position: -13
Score: 7.6
Sequence: AGACGTCT-(0)-AGACGTTG
Locus tag: VP0632
Name: metT
Funciton: Methionine transporter MetT, NhaC antiporter family
metT
Methionine transporter MetT, NhaC antiporter family

Position: -97
Score: 7.2
Sequence: AGACGTCT-(0)-AGATGTAG
Locus tag: VP2606
Name: metK
Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
metK
S-adenosylmethionine synthetase (EC 2.5.1.6)

Position: -231
Score: 6.9
Sequence: AGCAATCT-(0)-AGATGGCT
Locus tag: VP2938
Name: btuB
Funciton: TonB-dependent outer membrane transporter for vitamin B12
btuB
TonB-dependent outer membrane transporter for vitamin B12

Position: -66
Score: 7.3
Sequence: AGACGTCT-(0)-AGACTCCT
Locus tag: VP2717
Name: metH
Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)

Position: -108
Score: 6
Sequence: AGACGTCA-(0)-ACACTTCT
Position: -100
Score: 6.9
Sequence: ACACTTCT-(0)-AGACGTCT
Position: -92
Score: 7.7
Sequence: AGACGTCT-(0)-ATATGTCT
Locus tag: VP2766
Name: metJ
Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ
metJ
S-adenosylmethionine-responsive transcriptional repressor MetJ

Position: -252
Score: 5.3
Sequence: AGCCATCC-(0)-AGACAGAT
Locus tag: VPA1481
Name: mtsA
Funciton: Substrate-specific component MtsA of methionine-regulated ECF transporter
Locus tag: VPA1482
Name: mtsB
Funciton: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
Locus tag: VPA1483
Name: mtsC
Funciton: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter
mtsA
Substrate-specific component MtsA of methionine-regulated ECF transporter
mtsB
Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
mtsC
Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter

Position: -259
Score: 8.1
Sequence: AGACGTCT-(0)-AGACGTTT
Locus tag: VP1976
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family

Position: -210
Score: 6.2
Sequence: GGATATGT-(0)-AAACGTCT
Position: -202
Score: 7.7
Sequence: AAACGTCT-(0)-AGACGTCT
Position: -81
Score: 6.3
Sequence: AGCCATCC-(0)-AGACATCT
Locus tag: VP1974
Name: metE
Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD