Regulon of MetJ in Vibrio parahaemolyticus RIMD 2210633
| Regulator type: | Transcription factor |
| TF locus tag: | VP2766 |
| Regulator family: | MetJ |
| Regulation mode: | repressor |
| Biological process: | Methionine metabolism; Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Regulog: | MetJ - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 18 |
| - Operons | 13 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - MetJ
- By TF family - MetJ
- By effector - S-adenosylmethionine
- By pathway - Methionine metabolism
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -151
Score: 8.1 Sequence: AGACATAT-(0)-AGACGTCT
Position: -143
Score: 7.4 Sequence: AGACGTCT-(0)-AGAAGTGT
Position: -135
Score: 6.6 Sequence: AGAAGTGT-(0)-TGACGTCT
Locus tag: VP2765
Name: metB Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: VP2764
Name: metL Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
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metB
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Cystathionine gamma-synthase (EC 2.5.1.48)
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metL
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Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
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Position: -36
Score: 7.5 Sequence: AGCCGTAT-(0)-GGACGTCT
Locus tag: VP0379
Name: metQ2 Funciton: Methionine ABC transporter substrate-binding protein |
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metQ2
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Methionine ABC transporter substrate-binding protein
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Position: -70
Score: 7.7 Sequence: AGACATAT-(0)-AGACGTCT
Position: -62
Score: 7.3 Sequence: AGACGTCT-(0)-AAACGTCG
Locus tag: VP2763
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
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metF
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5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
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Position: -153
Score: 7.1 Sequence: ATACATTT-(0)-AGACGTCT
Position: -145
Score: 7.1 Sequence: AGACGTCT-(0)-AGACGTAA
Position: -137
Score: 6.1 Sequence: AGACGTAA-(0)-AAATATCT
Locus tag: VP0706
Name: metN Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: VP0705
Name: metI Funciton: Methionine ABC transporter permease protein
Locus tag: VP0704
Name: metQ Funciton: Methionine ABC transporter substrate-binding protein |
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metN
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Methionine ABC transporter ATP-binding protein
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metI
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Methionine ABC transporter permease protein
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metQ
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Methionine ABC transporter substrate-binding protein
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Position: -45
Score: 7.9 Sequence: AGAAGTAT-(0)-AGACGTCT
Locus tag: VP1751
Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46) |
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metA
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Homoserine O-succinyltransferase (EC 2.3.1.46)
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Position: -21
Score: 7.4 Sequence: AGCCATTT-(0)-AGACGTCT
Position: -13
Score: 7.6 Sequence: AGACGTCT-(0)-AGACGTTG
Locus tag: VP0632
Name: metT Funciton: Methionine transporter MetT, NhaC antiporter family |
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metT
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Methionine transporter MetT, NhaC antiporter family
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Position: -97
Score: 7.2 Sequence: AGACGTCT-(0)-AGATGTAG
Locus tag: VP2606
Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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metK
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S-adenosylmethionine synthetase (EC 2.5.1.6)
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Position: -231
Score: 6.9 Sequence: AGCAATCT-(0)-AGATGGCT
Locus tag: VP2938
Name: btuB Funciton: TonB-dependent outer membrane transporter for vitamin B12 |
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btuB
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TonB-dependent outer membrane transporter for vitamin B12
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Position: -66
Score: 7.3 Sequence: AGACGTCT-(0)-AGACTCCT
Locus tag: VP2717
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Position: -108
Score: 6 Sequence: AGACGTCA-(0)-ACACTTCT
Position: -100
Score: 6.9 Sequence: ACACTTCT-(0)-AGACGTCT
Position: -92
Score: 7.7 Sequence: AGACGTCT-(0)-ATATGTCT
Locus tag: VP2766
Name: metJ Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ |
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metJ
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S-adenosylmethionine-responsive transcriptional repressor MetJ
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Position: -252
Score: 5.3 Sequence: AGCCATCC-(0)-AGACAGAT
Locus tag: VPA1481
Name: mtsA Funciton: Substrate-specific component MtsA of methionine-regulated ECF transporter
Locus tag: VPA1482
Name: mtsB Funciton: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
Locus tag: VPA1483
Name: mtsC Funciton: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
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mtsA
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Substrate-specific component MtsA of methionine-regulated ECF transporter
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mtsB
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Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
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mtsC
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Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter
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Position: -259
Score: 8.1 Sequence: AGACGTCT-(0)-AGACGTTT
Locus tag: VP1976
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Position: -210
Score: 6.2 Sequence: GGATATGT-(0)-AAACGTCT
Position: -202
Score: 7.7 Sequence: AAACGTCT-(0)-AGACGTCT
Position: -81
Score: 6.3 Sequence: AGCCATCC-(0)-AGACATCT
Locus tag: VP1974
Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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metE
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |