Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of MetJ in Vibrio harveyi ATCC BAA-1116

Properties
Regulator type: Transcription factor
TF locus tag: VIBHAR_00050
Regulator family: MetJ
Regulation mode: repressor
Biological process: Methionine metabolism; Methionine biosynthesis
Effector: S-adenosylmethionine
Regulog: MetJ - Vibrionales
Statistics of regulated genes:
- Genes 18
- Operons 13
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 218 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -72
Score: 7.7
Sequence: AGACATAT-(0)-AGACGTCT
Position: -64
Score: 7.3
Sequence: AGACGTCT-(0)-AAACGTCG
Locus tag: VIBHAR_00047
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
VIBHAR_00047
metF
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -151
Score: 8.1
Sequence: AGACATAT-(0)-AGACGTCT
Position: -143
Score: 7.4
Sequence: AGACGTCT-(0)-AGAAGTGT
Position: -135
Score: 6.6
Sequence: AGAAGTGT-(0)-TGACGTCT
Locus tag: VIBHAR_00049
Name: metB
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: VIBHAR_00048
Name: metL
Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
VIBHAR_00049
metB
Cystathionine gamma-synthase (EC 2.5.1.48)
VIBHAR_00048
metL
Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Position: -153
Score: 7.1
Sequence: ATACATTT-(0)-AGACGTCT
Position: -145
Score: 7.1
Sequence: AGACGTCT-(0)-AGACGTAA
Position: -137
Score: 6.1
Sequence: AGACGTAA-(0)-AAATATCT
Locus tag: VIBHAR_01202
Name: metN
Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: VIBHAR_01201
Name: metI
Funciton: Methionine ABC transporter permease protein
Locus tag: VIBHAR_01200
Name: metQ
Funciton: Methionine ABC transporter substrate-binding protein
VIBHAR_01202
metN
Methionine ABC transporter ATP-binding protein
VIBHAR_01201
metI
Methionine ABC transporter permease protein
VIBHAR_01200
metQ
Methionine ABC transporter substrate-binding protein
Position: -84
Score: 7.4
Sequence: AGCCATTT-(0)-AGACGTCT
Position: -76
Score: 7.6
Sequence: AGACGTCT-(0)-AGACGTTG
Locus tag: VIBHAR_01104
Name: metT
Funciton: Methionine transporter MetT, NhaC antiporter family
VIBHAR_01104
metT
Methionine transporter MetT, NhaC antiporter family
Position: -97
Score: 7.2
Sequence: AGACGTCT-(0)-AGATGTAG
Locus tag: VIBHAR_03568
Name: metK
Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
VIBHAR_03568
metK
S-adenosylmethionine synthetase (EC 2.5.1.6)
Position: -66
Score: 7.3
Sequence: AGACGTCT-(0)-AGACTCCT
Locus tag: VIBHAR_03712
Name: metH
Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
VIBHAR_03712
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -231
Score: 6.9
Sequence: AGCAATCT-(0)-AGATGGCT
Locus tag: VIBHAR_00261
Name: btuB
Funciton: TonB-dependent outer membrane transporter for vitamin B12
VIBHAR_00261
btuB
TonB-dependent outer membrane transporter for vitamin B12
Position: -110
Score: 6
Sequence: AGACGTCA-(0)-ACACTTCT
Position: -102
Score: 6.9
Sequence: ACACTTCT-(0)-AGACGTCT
Position: -94
Score: 7.7
Sequence: AGACGTCT-(0)-ATATGTCT
Locus tag: VIBHAR_00050
Name: metJ
Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ
VIBHAR_00050
metJ
S-adenosylmethionine-responsive transcriptional repressor MetJ
Position: -244
Score: 5.3
Sequence: AGCCATCC-(0)-AGACAGAT
Locus tag: VIBHAR_05109
Name: mtsA
Funciton: Substrate-specific component MtsA of methionine-regulated ECF transporter
Locus tag: VIBHAR_05108
Name: mtsB
Funciton: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
Locus tag: VIBHAR_05107
Name: mtsC
Funciton: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter
VIBHAR_05109
mtsA
Substrate-specific component MtsA of methionine-regulated ECF transporter
VIBHAR_05108
mtsB
Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
VIBHAR_05107
mtsC
Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter
Position: -217
Score: 5.3
Sequence: ATCCATCA-(0)-AGATGGTT
Locus tag: VIBHAR_02028
Name: csd
Funciton: Cysteine desulfurase (EC 2.8.1.7)
VIBHAR_02028
csd
Cysteine desulfurase (EC 2.8.1.7)
Position: -44
Score: 8
Sequence: AGATGTAT-(0)-AGACGTCT
Locus tag: VIBHAR_02491
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
VIBHAR_02491
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)
Position: -203
Score: 7.1
Sequence: AGATGTCT-(0)-GGATGGCT
Position: -82
Score: 8.1
Sequence: AGACGTCT-(0)-AGACGTTT
Locus tag: VIBHAR_02773
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
VIBHAR_02773
metR
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -198
Score: 7.7
Sequence: AAACGTCT-(0)-AGACGTCT
Position: -77
Score: 6.3
Sequence: AGCCATCC-(0)-AGACATCT
Locus tag: VIBHAR_02772
Name: metE
Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
VIBHAR_02772
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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