Regulon of MetJ in Vibrio splendidus LGP32
| Regulator type: | Transcription factor |
| TF locus tag: | VS_2895 |
| Regulator family: | MetJ |
| Regulation mode: | repressor |
| Biological process: | Methionine metabolism; Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Regulog: | MetJ - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 11 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - MetJ
- By TF family - MetJ
- By effector - S-adenosylmethionine
- By pathway - Methionine metabolism
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
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Position: -210
Score: 6.7 Sequence: AGGCGTCT-(0)-GGATGGCT
Position: -89
Score: 7.4 Sequence: GGACATCT-(0)-AGACGTTT
Locus tag: VS_1144
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Position: -83
Score: 6.7 Sequence: GGGCGTTT-(0)-AGACGTCT
Position: -75
Score: 7.6 Sequence: AGACGTCT-(0)-AGACGTTG
Locus tag: VS_II1202
Name: metT Funciton: Methionine transporter MetT, NhaC antiporter family |
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metT
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Methionine transporter MetT, NhaC antiporter family
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Position: -97
Score: 7.5 Sequence: AGACATAT-(0)-AGACGTCC
Position: -89
Score: 6.1 Sequence: AGACGTCC-(0)-GGAAGTGT
Position: -81
Score: 6.1 Sequence: GGAAGTGT-(0)-TGACGTCT
Locus tag: VS_2894
Name: metB Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: VS_2893
Name: metL Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
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metB
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Cystathionine gamma-synthase (EC 2.5.1.48)
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metL
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Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
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Position: -114
Score: 6.8 Sequence: AGCCGTCT-(0)-AGACGTAA
Position: -106
Score: 6.1 Sequence: AGACGTAA-(0)-AAATATCT
Locus tag: VS_2382
Name: metN Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: VS_2383
Name: metI Funciton: Methionine ABC transporter permease protein
Locus tag: VS_2384
Name: metQ Funciton: Methionine ABC transporter substrate-binding protein |
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metN
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Methionine ABC transporter ATP-binding protein
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metI
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Methionine ABC transporter permease protein
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metQ
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Methionine ABC transporter substrate-binding protein
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Position: -41
Score: 8 Sequence: AGATGTAT-(0)-AGACGTCT
Position: -33
Score: 6.6 Sequence: AGACGTCT-(0)-ACATATCT
Locus tag: VS_1677
Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46) |
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metA
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Homoserine O-succinyltransferase (EC 2.3.1.46)
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Position: -129
Score: 6.8 Sequence: AGCCGTCT-(0)-AGATGTAG
Locus tag: VS_2655
Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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metK
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S-adenosylmethionine synthetase (EC 2.5.1.6)
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Position: -177
Score: 4.7 Sequence: AGACCACT-(0)-AAACGGTC
Locus tag: VS_II0189
Name: mtsA Funciton: Substrate-specific component MtsA of methionine-regulated ECF transporter
Locus tag: VS_II0188
Name: mtsB Funciton: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
Locus tag: VS_II0187
Name: mtsC Funciton: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter |
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mtsA
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Substrate-specific component MtsA of methionine-regulated ECF transporter
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mtsB
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Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
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mtsC
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Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter
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Position: -215
Score: 7 Sequence: GGATGTAT-(0)-AGATGGCT
Locus tag: VS_2998
Name: btuB Funciton: TonB-dependent outer membrane transporter for vitamin B12 |
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btuB
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TonB-dependent outer membrane transporter for vitamin B12
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Position: -66
Score: 7.3 Sequence: AGACGTCT-(0)-AGACTCCT
Locus tag: VS_0315
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Position: -107
Score: 5.4 Sequence: AGACGTCA-(0)-ACACTTCC
Position: -91
Score: 7.2 Sequence: GGACGTCT-(0)-ATATGTCT
Locus tag: VS_2895
Name: metJ Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ |
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metJ
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S-adenosylmethionine-responsive transcriptional repressor MetJ
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Position: -208
Score: 7 Sequence: AAACGTCT-(0)-AGATGTCC
Position: -87
Score: 6.4 Sequence: AGCCATCC-(0)-AGACGCCT
Locus tag: VS_1145
Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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metE
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |