Regulon of MetJ in Photobacterium profundum SS9

Properties
Regulator type:	Transcription factor
TF locus tag:	PBPRA0260
Regulator family:	MetJ
Regulation mode:	repressor
Biological process:	Methionine metabolism; Methionine biosynthesis
Effector:	S-adenosylmethionine
Regulog:	MetJ - Vibrionales
Statistics of regulated genes:
- Genes	16
- Operons	11
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 218 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - MetJ
By TF family - MetJ
By effector - S-adenosylmethionine
By pathway - Methionine metabolism
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -161 Score: 5 Sequence: TTACGTTT-(0)-AGCCATCT Position: -153 Score: 5.7 Sequence: AGCCATCT-(0)-AGCCGTAA Position: -121 Score: 5.5 Sequence: AGCCATCC-(0)-AGACACCC Locus tag: PBPRA2940 Name: metN Funciton: Methionine ABC transporter ATP-binding protein Locus tag: PBPRA2941 Name: metI Funciton: Methionine ABC transporter permease protein Locus tag: PBPRA2942 Name: metQ Funciton: Methionine ABC transporter substrate-binding protein
	PBPRA2940	metN	Methionine ABC transporter ATP-binding protein
	PBPRA2941	metI	Methionine ABC transporter permease protein
	PBPRA2942	metQ	Methionine ABC transporter substrate-binding protein
Position: -77 Score: 6.7 Sequence: AGGTATTT-(0)-AGACGTCT Position: -69 Score: 7.2 Sequence: AGACGTCT-(0)-AGATTTCC Locus tag: PBPRA3294 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	PBPRA3294	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -106 Score: 5.4 Sequence: AGACGTCA-(0)-ACACTTCC Position: -90 Score: 7.7 Sequence: AGACGTCT-(0)-ATATGTCT Locus tag: PBPRA0260 Name: metJ Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ
	PBPRA0260	metJ	S-adenosylmethionine-responsive transcriptional repressor MetJ
Position: -239 Score: 6.6 Sequence: AGACGTCT-(0)-AGATGGAA Locus tag: PBPRA2239 Name: mtsA Funciton: Substrate-specific component MtsA of methionine-regulated ECF transporter Locus tag: PBPRA2240 Name: mtsB Funciton: Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter Locus tag: PBPRA2241 Name: mtsC Funciton: Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter
	PBPRA2239	mtsA	Substrate-specific component MtsA of methionine-regulated ECF transporter
	PBPRA2240	mtsB	Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter
	PBPRA2241	mtsC	Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter
Position: -106 Score: 8.1 Sequence: AGACATAT-(0)-AGACGTCT Position: -98 Score: 7 Sequence: AGACGTCT-(0)-GGAAGTGT Position: -90 Score: 6.1 Sequence: GGAAGTGT-(0)-TGACGTCT Locus tag: PBPRA0261 Name: metB Funciton: Cystathionine gamma-synthase (EC 2.5.1.48) Locus tag: PBPRA0262 Name: metL Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
	PBPRA0261	metB	Cystathionine gamma-synthase (EC 2.5.1.48)
	PBPRA0262	metL	Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Position: -126 Score: 6.6 Sequence: AGCCGTCT-(0)-AGACGGAG Locus tag: PBPRA3134 Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
	PBPRA3134	metK	S-adenosylmethionine synthetase (EC 2.5.1.6)
Position: -85 Score: 7.2 Sequence: GGATGTTT-(0)-AGACGTCT Position: -77 Score: 7.1 Sequence: AGACGTCT-(0)-AGAAGTTG Locus tag: PBPRA2837 Name: metT Funciton: Methionine transporter MetT, NhaC antiporter family
	PBPRA2837	metT	Methionine transporter MetT, NhaC antiporter family
Position: -232 Score: 6.2 Sequence: AGCGGTAT-(0)-GGATGGCT Position: -82 Score: 8 Sequence: AGACGTCT-(0)-AGATGTTT Locus tag: PBPRA1378 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	PBPRA1378	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -196 Score: 5.5 Sequence: GGAAGTGT-(0)-AAACATCT Position: -188 Score: 7.5 Sequence: AAACATCT-(0)-AGACGTCT Locus tag: PBPRA1379 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	PBPRA1379	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -45 Score: 7.9 Sequence: AGATATCT-(0)-AGACGTCT Position: -37 Score: 7.1 Sequence: AGACGTCT-(0)-AAACATCT Locus tag: PBPRA0369 Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
	PBPRA0369	metA	Homoserine O-succinyltransferase (EC 2.3.1.46)
Position: -82 Score: 7.7 Sequence: AGACATAT-(0)-AGACGTCT Position: -74 Score: 7.1 Sequence: AGACGTCT-(0)-AAACGGTT Locus tag: PBPRA0263 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
	PBPRA0263	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of MetJ in Photobacterium profundum SS9

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --