Regulog SAM - Cyanobacteria
| Regulator type: | RNA regulatory element |
| Name: | SAM |
| RFAM: | RF00162 |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Phylum: | Cyanobacteria |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By RNA motif - SAM
- By effector - S-adenosylmethionine
- By pathway - Methionine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Synechococcus sp. PCC 7002 | ||
| Synechocystis sp. PCC 6803 | ||
| Cyanothece sp. ATCC 51142 | ||
| Cyanothece sp. PCC 8801 | ||
| Cyanothece sp. PCC 7425 | ||
| Microcystis aeruginosa NIES-843 | ||
| Nostoc sp. PCC 7120 | ||
| Trichodesmium erythraeum IMS101 | ||
| Synechococcus elongatus PCC 7942 | ||
| Prochlorococcus marinus str. MIT 9313 | ||
| Synechococcus sp. JA-3-3Ab | 1 | 1 |
| Synechococcus sp. WH 8102 | ||
| Gloeobacter violaceus PCC 7421 | 1 | 1 |
| Thermosynechococcus elongatus BP-1 |
| Genes | Function | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||
| metK |
Gene: SYNPCC7002_A1714: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: sll0927: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: cce_1822: S-adenosylmethionine synthetase (EC 2.5.1.6) |
2
Cyanothece sp. PCC 8801 Gene: PCC8801_1832: S-adenosylmethionine synthetase (EC 2.5.1.6) Gene: PCC8801_3004: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: Cyan7425_4132: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: MAE_45970: S-adenosylmethionine synthetase (EC 2.5.1.6) |
2
Nostoc sp. PCC 7120 Gene: all3244: S-adenosylmethionine synthetase (EC 2.5.1.6) Gene: alr4124: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: Tery_4661: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: Synpcc7942_2463: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: PMT1670: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Synechococcus sp. JA-3-3Ab Site: position = -429 score = 74.58 sequence = TTCTTTATCCAGAGC... Gene: CYA_1186: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: SYNW1987: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Gloeobacter violaceus PCC 7421 Site: position = -183 score = 78.51 sequence = TGACTTATCCAGAGC... Gene: gll2577: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: null: S-adenosylmethionine synthetase (EC 2.5.1.6) |
S-adenosylmethionine synthetase (EC 2.5.1.6) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |