Regulog SAM - Desulfovibrionales

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Desulfovibrio vulgaris Hildenborough	1	1
Desulfovibrio vulgaris str. Miyazaki F	1	1
Desulfovibrio desulfuricans G20	1	1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638	1	1
Desulfovibrio magneticus RS-1
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028
Desulfohalobium retbaense DSM 5692

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
DVU1170	* Desulfovibrio vulgaris Hildenborough Site: position = -372 score = 45.81 sequence = TCACTCATGACGAGG... Gene: DVU1170: Hypothetical protein	* Desulfovibrio vulgaris str. Miyazaki F Site: position = -410 score = 45.04 sequence = CCATTCATGGAGAGA... Gene: DvMF_3066: Hypothetical protein	* Desulfovibrio desulfuricans G20 Site: position = -291 score = 51.36 sequence = ACTCATGAAGAGGAC... Gene: Dde_2470: Hypothetical protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio piger ATCC 29098	* Desulfovibrio salexigens DSM 2638 Site: position = -317 score = 53.59 sequence = TTACTCATGTAGAGG... Gene: Desal_0862: Hypothetical protein	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	Hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --