Regulog MetR - Shewanellaceae

Properties
Regulator type:	Transcription factor
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 117 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Shewanella oneidensis MR-1	7	6
Shewanella putrefaciens CN-32	7	6
Shewanella sp W3-18-1	7	6
Shewanella sp ANA-3	7	6
Shewanella sp MR-4	7	6
Shewanella sp MR-7	7	6
Shewanella baltica OS155	7	6
Shewanella denitrificans OS217	6	5
Shewanella frigidimarina NCIMB 400	4	3
Shewanella amazonensis SB2B	5	4
Shewanella loihica PV-4	6	5
Shewanella pealeana ATCC 700345	5	4
Shewanella halifaxensis HAW-EB4	4	3
Shewanella piezotolerans WP3	4	3
Shewanella sediminis HAW-EB3	5	4
Shewanella woodyi ATCC 51908	2	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																	Function

CRON 1.
ilvI	* Shewanella oneidensis MR-1 Site: position = -203 score = 3.93567 sequence = TTGAAATGTGTTCTT Site: position = -243 score = 4.54669 sequence = ATGAAATTGTCTCAA Gene: SO2279: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella putrefaciens CN-32 Site: position = -243 score = 4.38581 sequence = TTGAAAATGTTTCAA Gene: Sputcn32_2138: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella sp W3-18-1 Site: position = -243 score = 4.38581 sequence = TTGAAAATGTTTCAA Gene: Sputw3181_1873: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella sp ANA-3 Site: position = -203 score = 3.93567 sequence = TTGAAATGTGTTCTT Site: position = -243 score = 4.69933 sequence = ATGAAATTGTTTCAA Gene: Shewana3_2269: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella sp MR-4 Site: position = -204 score = 4.04276 sequence = TTGAAATGTATTCTT Site: position = -244 score = 4.69933 sequence = ATGAAATTGTTTCAA Gene: Shewmr4_1750: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella sp MR-7 Site: position = -203 score = 3.93567 sequence = TTGAAATGTGTTCTT Site: position = -243 score = 4.69933 sequence = ATGAAATTGTTTCAA Gene: Shewmr7_1830: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella baltica OS155 Site: position = -120 score = 4.05249 sequence = ACGAAGTCAGTTCAG Site: position = -245 score = 4.47247 sequence = GTGAAATTGTTTCAA Gene: Sbal_2386: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella denitrificans OS217 Site: position = -91 score = 4.2499 sequence = TTGAAGTACCTTCAA Site: position = -245 score = 4.4646 sequence = ATGAATTTTACTCAC Gene: Sden_2122: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella frigidimarina NCIMB 400 Site: position = -236 score = 4.87153 sequence = ATGAAATGATTTCAA Gene: Sfri_1628: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella amazonensis SB2B Site: position = -245 score = 3.72663 sequence = TTGAATTTTCTTTAA Site: position = -341 score = 3.37922 sequence = CTGAAAGCGATTTAT Gene: Sama_2018: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella loihica PV-4 Site: position = -221 score = 4.15863 sequence = GTGAGTTTTGCTCAA Gene: Shew_1776: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella pealeana ATCC 700345 Site: position = -243 score = 4.59679 sequence = ATGAATTTTCTTCAT Gene: Spea_1911: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella halifaxensis HAW-EB4 Site: position = -244 score = 4.32237 sequence = ATGAATGTTCTTCAT Gene: Shal_2387: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella piezotolerans WP3 Site: position = -242 score = 4.23057 sequence = TTGAAAATTCTTCAT Gene: swp_2842: Acetolactate synthase large subunit (EC 2.2.1.6)	* Shewanella sediminis HAW-EB3 Site: position = -247 score = 4.56454 sequence = GTGAATTTTTTTCAT Gene: Ssed_2666: Acetolactate synthase large subunit (EC 2.2.1.6)	Shewanella woodyi ATCC 51908 Gene: Swoo_1955: Acetolactate synthase large subunit (EC 2.2.1.6)	Acetolactate synthase large subunit (EC 2.2.1.6)
ilvH	Shewanella oneidensis MR-1 Gene: SO2278: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella putrefaciens CN-32 Gene: Sputcn32_2139: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella sp W3-18-1 Gene: Sputw3181_1872: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella sp ANA-3 Gene: Shewana3_2270: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella sp MR-4 Gene: Shewmr4_1749: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella sp MR-7 Gene: Shewmr7_1829: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella baltica OS155 Gene: Sbal_2387: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella denitrificans OS217 Gene: Sden_2123: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella frigidimarina NCIMB 400 Gene: Sfri_1627: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella amazonensis SB2B Gene: Sama_2019: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella loihica PV-4 Gene: Shew_1775: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella pealeana ATCC 700345 Gene: Spea_1910: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella halifaxensis HAW-EB4 Gene: Shal_2388: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella piezotolerans WP3 Gene: swp_2843: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella sediminis HAW-EB3 Gene: Ssed_2667: Acetolactate synthase small subunit (EC 2.2.1.6)	Shewanella woodyi ATCC 51908 Gene: Swoo_1954: Acetolactate synthase small subunit (EC 2.2.1.6)	Acetolactate synthase small subunit (EC 2.2.1.6)

CRON 2.
metC	* Shewanella oneidensis MR-1 Site: position = -110 score = 4.25215 sequence = TTGAGGCAAACTCAT Gene: SO2191: Cystathionine beta-lyase (EC 4.4.1.8)	* Shewanella putrefaciens CN-32 Site: position = -141 score = 4.43859 sequence = ATGAGCCAAACTCAT Gene: Sputcn32_1736: Cystathionine beta-lyase (EC 4.4.1.8)	* Shewanella sp W3-18-1 Site: position = -141 score = 4.43859 sequence = ATGAGCCAAACTCAT Gene: Sputw3181_2289: Cystathionine beta-lyase (EC 4.4.1.8)	* Shewanella sp ANA-3 Site: position = -109 score = 4.25215 sequence = TTGAGGCAAACTCAT Gene: Shewana3_2414: Cystathionine beta-lyase (EC 4.4.1.8)	* Shewanella sp MR-4 Site: position = -109 score = 4.25215 sequence = TTGAGGCAAACTCAT Gene: Shewmr4_2204: Cystathionine beta-lyase (EC 4.4.1.8)	* Shewanella sp MR-7 Site: position = -109 score = 4.25215 sequence = TTGAGGCAAACTCAT Gene: Shewmr7_2281: Cystathionine beta-lyase (EC 4.4.1.8)	* Shewanella baltica OS155 Site: position = -148 score = 4.54568 sequence = ATGAGTCAAACTCAT Gene: Sbal_1838: Cystathionine beta-lyase (EC 4.4.1.8)	Shewanella denitrificans OS217 Gene: Sden_2313: Cystathionine beta-lyase (EC 4.4.1.8)	Shewanella frigidimarina NCIMB 400 Gene: Sfri_1621: Cystathionine beta-lyase (EC 4.4.1.8)	Shewanella amazonensis SB2B Gene: Sama_2008: Cystathionine beta-lyase (EC 4.4.1.8)	Shewanella loihica PV-4 Gene: Shew_1789: Cystathionine beta-lyase (EC 4.4.1.8)	Shewanella pealeana ATCC 700345 Gene: Spea_2520: Cystathionine beta-lyase (EC 4.4.1.8)	Shewanella halifaxensis HAW-EB4 Gene: Shal_1732: Cystathionine beta-lyase (EC 4.4.1.8)	Shewanella piezotolerans WP3 Gene: swp_3096: Cystathionine beta-lyase (EC 4.4.1.8)	Shewanella sediminis HAW-EB3 Gene: Ssed_2496: Cystathionine beta-lyase (EC 4.4.1.8)	Shewanella woodyi ATCC 51908 Gene: Swoo_2120: Cystathionine beta-lyase (EC 4.4.1.8)	Cystathionine beta-lyase (EC 4.4.1.8)

CRON 3.
metE	* Shewanella oneidensis MR-1 Site: position = -166 score = 4.30796 sequence = TTGAAATCAATTCGG Site: position = -188 score = 4.35037 sequence = GTGAATTTCGCTCAT Gene: SO0818: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	* Shewanella putrefaciens CN-32 Site: position = -189 score = 4.35037 sequence = GTGAATTTCGCTCAT Site: position = -167 score = 4.30796 sequence = TTGAAATCAATTCGG Gene: Sputcn32_3172: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	* Shewanella sp W3-18-1 Site: position = -189 score = 4.45747 sequence = GTGAATTTCACTCAT Site: position = -167 score = 4.30796 sequence = TTGAAATCAATTCGG Gene: Sputw3181_0771: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	* Shewanella sp ANA-3 Site: position = -189 score = 4.35037 sequence = GTGAATTTCGCTCAT Site: position = -167 score = 4.30796 sequence = TTGAAATCAATTCGG Gene: Shewana3_3469: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	* Shewanella sp MR-4 Site: position = -166 score = 4.30796 sequence = TTGAAATCAATTCGG Site: position = -188 score = 4.35037 sequence = GTGAATTTCGCTCAT Gene: Shewmr4_3299: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	* Shewanella sp MR-7 Site: position = -189 score = 4.35037 sequence = GTGAATTTCGCTCAT Site: position = -167 score = 4.30796 sequence = TTGAAATCAATTCGG Gene: Shewmr7_0654: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	* Shewanella baltica OS155 Site: position = -167 score = 4.30796 sequence = TTGAAATCAATTCGG Site: position = -189 score = 4.29767 sequence = GTGAAATTCGCTCAT Gene: Sbal_0667: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	* Shewanella denitrificans OS217 Site: position = -146 score = 4.53168 sequence = ATGAGTTTCACTCAT Site: position = -124 score = 4.0853 sequence = CTGAATTTATTTCCA Gene: Sden_0732: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	Shewanella frigidimarina NCIMB 400	* Shewanella amazonensis SB2B Site: position = -153 score = 4.4897 sequence = ATGAAGTTTGTTCAT Site: position = -131 score = 4.08435 sequence = GTGAACACAATTCGT Gene: Sama_2627: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	* Shewanella loihica PV-4 Site: position = -167 score = 4.3598 sequence = GTGAAATCAATTCGA Site: position = -189 score = 4.59123 sequence = ATGAATTTGGCTCAT Gene: Shew_2986: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	* Shewanella pealeana ATCC 700345 Site: position = -166 score = 4.52452 sequence = ATGAAATTCGCTCAT Site: position = -144 score = 4.28 sequence = TTGAATTCGTTTCGA Gene: Spea_3202: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3	* Shewanella sediminis HAW-EB3 Site: position = -191 score = 4.737 sequence = ATGAATTTTGTTCAT Site: position = -169 score = 4.58665 sequence = TTGAAATCAATTCGT Gene: Ssed_3555: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	Shewanella woodyi ATCC 51908	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)

CRON 4.
luxS	* Shewanella oneidensis MR-1 Site: position = -120 score = 4.76511 sequence = ATGAGATGATTTCAT Gene: SO1101: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	* Shewanella putrefaciens CN-32 Site: position = -278 score = 4.48645 sequence = TTGAGAGAATTTCAA Gene: Sputcn32_0938: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	* Shewanella sp W3-18-1 Site: position = -278 score = 4.48645 sequence = TTGAGAGAATTTCAA Gene: Sputw3181_3238: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	* Shewanella sp ANA-3 Site: position = -111 score = 4.53826 sequence = GTGAGATGATTTCAT Gene: Shewana3_0936: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	* Shewanella sp MR-4 Site: position = -111 score = 4.76511 sequence = ATGAGATGATTTCAT Gene: Shewmr4_0934: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	* Shewanella sp MR-7 Site: position = -111 score = 4.76511 sequence = ATGAGATGATTTCAT Gene: Shewmr7_0972: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	* Shewanella baltica OS155 Site: position = -121 score = 4.76511 sequence = ATGAGATGATTTCAT Gene: Sbal_0922: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	* Shewanella denitrificans OS217 Site: position = -101 score = 4.65694 sequence = TTGAAATCTATTCAT Gene: Sden_0981: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	Shewanella frigidimarina NCIMB 400 Gene: Sfri_0947: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	Shewanella amazonensis SB2B Gene: Sama_2541: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	* Shewanella loihica PV-4 Site: position = -153 score = 4.47147 sequence = TTGAGCTAAGTTCAC Gene: Shew_2882: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	Shewanella pealeana ATCC 700345 Gene: Spea_3104: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	Shewanella halifaxensis HAW-EB4 Gene: Shal_3188: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	Shewanella piezotolerans WP3 Gene: swp_1166: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	Shewanella sediminis HAW-EB3 Gene: Ssed_3432: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	Shewanella woodyi ATCC 51908 Gene: Swoo_3618: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS	S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS

CRON 5.
mdeA	Shewanella oneidensis MR-1 Gene: SO1812: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella putrefaciens CN-32 Gene: Sputcn32_1507: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella sp W3-18-1 Gene: Sputw3181_2594: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella sp ANA-3 Gene: Shewana3_2643: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella sp MR-4 Gene: Shewmr4_2477: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella sp MR-7 Gene: Shewmr7_2545: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella baltica OS155 Gene: Sbal_1622: Methionine gamma-lyase (EC 4.4.1.11)	* Shewanella denitrificans OS217 Site: position = -67 score = 5.05868 sequence = ATGAAATTAATTCAT Gene: Sden_2521: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella frigidimarina NCIMB 400 Gene: Sfri_1369: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella amazonensis SB2B Gene: Sama_1242: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella loihica PV-4 Gene: Shew_2491: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella pealeana ATCC 700345 Gene: Spea_2664: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella halifaxensis HAW-EB4 Gene: Shal_2751: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella piezotolerans WP3 Gene: swp_3243: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella sediminis HAW-EB3 Gene: Ssed_1559: Methionine gamma-lyase (EC 4.4.1.11)	Shewanella woodyi ATCC 51908 Gene: Swoo_3095: Methionine gamma-lyase (EC 4.4.1.11)	Methionine gamma-lyase (EC 4.4.1.11)

CRON 6.
glyA	* Shewanella oneidensis MR-1 Site: position = -120 score = 4.25634 sequence = TTGAGGTGCATTCAA Gene: SO3471: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella putrefaciens CN-32 Site: position = -120 score = 4.4379 sequence = ATGAGCCAAGTTCAA Gene: Sputcn32_2780: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella sp W3-18-1 Site: position = -120 score = 4.4379 sequence = ATGAGCCAAGTTCAA Gene: Sputw3181_1232: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella sp ANA-3 Site: position = -120 score = 4.16325 sequence = TTGAGGCGAGTTCAA Gene: Shewana3_1094: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella sp MR-4 Site: position = -120 score = 4.16325 sequence = TTGAGGCGAGTTCAA Gene: Shewmr4_1094: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella sp MR-7 Site: position = -120 score = 4.16325 sequence = TTGAGGCGAGTTCAA Gene: Shewmr7_1160: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella baltica OS155 Site: position = -120 score = 4.4379 sequence = ATGAGCCAAGTTCAA Gene: Sbal_3162: Serine hydroxymethyltransferase (EC 2.1.2.1)	Shewanella denitrificans OS217 Gene: Sden_1142: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella frigidimarina NCIMB 400 Site: position = -212 score = 3.7102 sequence = ATGTGCTGAACTCAA Gene: Sfri_1033: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella amazonensis SB2B Site: position = -120 score = 3.73724 sequence = ATGAAACACAGTCAT Gene: Sama_1014: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella loihica PV-4 Site: position = -122 score = 3.98567 sequence = ATGAACATTTCTCAG Gene: Shew_1185: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella pealeana ATCC 700345 Site: position = -119 score = 4.03362 sequence = ACGAAACTCACTCAT Gene: Spea_1160: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella halifaxensis HAW-EB4 Site: position = -119 score = 3.98091 sequence = ACGAAACTCTCTCAT Gene: Shal_1203: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella piezotolerans WP3 Site: position = -119 score = 4.0284 sequence = ATAAGTTTAACTCAT Gene: swp_1337: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella sediminis HAW-EB3 Site: position = -218 score = 4.41611 sequence = TTGAATTGTCTTCAA Site: position = -199 score = 4.05321 sequence = ATGAGTTTCCTTCGA Gene: Ssed_1271: Serine hydroxymethyltransferase (EC 2.1.2.1)	* Shewanella woodyi ATCC 51908 Site: position = -119 score = 4.09708 sequence = GTGAGTCATGTTCAT Gene: Swoo_1380: Serine hydroxymethyltransferase (EC 2.1.2.1)	Serine hydroxymethyltransferase (EC 2.1.2.1)

CRON 7.
metR	* Shewanella oneidensis MR-1 Site: position = -48 score = 4.30796 sequence = CCGAATTGATTTCAA Site: position = -26 score = 4.35037 sequence = ATGAGCGAAATTCAC Gene: SO0817: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella putrefaciens CN-32 Site: position = -48 score = 4.30796 sequence = CCGAATTGATTTCAA Site: position = -26 score = 4.35037 sequence = ATGAGCGAAATTCAC Gene: Sputcn32_3173: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella sp W3-18-1 Site: position = -48 score = 4.30796 sequence = CCGAATTGATTTCAA Site: position = -26 score = 4.45747 sequence = ATGAGTGAAATTCAC Gene: Sputw3181_0770: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella sp ANA-3 Site: position = -48 score = 4.30796 sequence = CCGAATTGATTTCAA Site: position = -26 score = 4.35037 sequence = ATGAGCGAAATTCAC Gene: Shewana3_3470: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella sp MR-4 Site: position = -48 score = 4.30796 sequence = CCGAATTGATTTCAA Site: position = -26 score = 4.35037 sequence = ATGAGCGAAATTCAC Gene: Shewmr4_3300: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella sp MR-7 Site: position = -26 score = 4.35037 sequence = ATGAGCGAAATTCAC Site: position = -48 score = 4.30796 sequence = CCGAATTGATTTCAA Gene: Shewmr7_0653: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella baltica OS155 Site: position = -48 score = 4.30796 sequence = CCGAATTGATTTCAA Site: position = -26 score = 4.29767 sequence = ATGAGCGAATTTCAC Gene: Sbal_0666: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella denitrificans OS217 Site: position = -48 score = 4.0853 sequence = TGGAAATAAATTCAG Site: position = -26 score = 4.53168 sequence = ATGAGTGAAACTCAT Gene: Sden_0731: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella frigidimarina NCIMB 400 Site: position = -48 score = 4.58665 sequence = TCGAATTGATTTCAT Site: position = -26 score = 4.27771 sequence = TTGAGCAAGATTCAT Gene: Sfri_0826: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella amazonensis SB2B Site: position = -141 score = 4.3972 sequence = ATGAGCACATTTCAA Site: position = -48 score = 4.08435 sequence = ACGAATTGTGTTCAC Site: position = -26 score = 4.4897 sequence = ATGAACAAACTTCAT Gene: Sama_2628: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella loihica PV-4 Site: position = -26 score = 4.59123 sequence = ATGAGCCAAATTCAT Site: position = -48 score = 4.3598 sequence = TCGAATTGATTTCAC Site: position = -178 score = 4.63162 sequence = ATGAGAGAAATTCAT Gene: Shew_2987: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella pealeana ATCC 700345 Site: position = -154 score = 4.16546 sequence = ATGAGGAAAATTCAG Site: position = -48 score = 4.28 sequence = TCGAAACGAATTCAA Site: position = -26 score = 4.52452 sequence = ATGAGCGAATTTCAT Gene: Spea_3203: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella halifaxensis HAW-EB4 Site: position = -162 score = 4.30566 sequence = ATGAGCAAAATTCAG Site: position = -48 score = 4.28 sequence = TCGAAACGAATTCAA Gene: Shal_3283: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella piezotolerans WP3 Site: position = -26 score = 4.39145 sequence = ATGAGAAAACTTCAT Site: position = -48 score = 4.26383 sequence = TAGAAATGAATTCAA Site: position = -153 score = 4.5654 sequence = ATGAATAAAATTCAG Gene: swp_1138: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella sediminis HAW-EB3 Site: position = -190 score = 3.99059 sequence = GTGAGCAGAATTCAG Site: position = -59 score = 4.58665 sequence = ACGAATTGATTTCAA Site: position = -37 score = 4.737 sequence = ATGAACAAAATTCAT Gene: Ssed_3556: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	* Shewanella woodyi ATCC 51908 Site: position = -59 score = 3.78163 sequence = GGGAATAGATTTCAA Site: position = -192 score = 4.30566 sequence = ATGAGCAAAATTCAG Site: position = -37 score = 4.53168 sequence = ATGAGTGAAACTCAT Gene: Swoo_3732: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog MetR - Shewanellaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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