Regulon of MetR in Shewanella amazonensis SB2B

Properties
Regulator type:	Transcription factor
TF locus tag:	Sama_2628
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 117 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -141 Score: 4.4 Sequence: ATGAGCACATTTCAA Position: -48 Score: 4.1 Sequence: ACGAATTGTGTTCAC Position: -26 Score: 4.5 Sequence: ATGAACAAACTTCAT Locus tag: Sama_2628 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	Sama_2628	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -120 Score: 3.7 Sequence: ATGAAACACAGTCAT Locus tag: Sama_1014 Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
	Sama_1014	glyA	Serine hydroxymethyltransferase (EC 2.1.2.1)
Position: -341 Score: 3.4 Sequence: CTGAAAGCGATTTAT Position: -245 Score: 3.7 Sequence: TTGAATTTTCTTTAA Locus tag: Sama_2018 Name: ilvI Funciton: Acetolactate synthase large subunit (EC 2.2.1.6) Locus tag: Sama_2019 Name: ilvH Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
	Sama_2018	ilvI	Acetolactate synthase large subunit (EC 2.2.1.6)
	Sama_2019	ilvH	Acetolactate synthase small subunit (EC 2.2.1.6)
Position: -153 Score: 4.5 Sequence: ATGAAGTTTGTTCAT Position: -131 Score: 4.1 Sequence: GTGAACACAATTCGT Locus tag: Sama_2627 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	Sama_2627	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD