Regulon of MetR in Shewanella sediminis HAW-EB3

Properties
Regulator type:	Transcription factor
TF locus tag:	Ssed_3556
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 117 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -191 Score: 4.7 Sequence: ATGAATTTTGTTCAT Position: -169 Score: 4.6 Sequence: TTGAAATCAATTCGT Locus tag: Ssed_3555 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	Ssed_3555	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -190 Score: 4 Sequence: GTGAGCAGAATTCAG Position: -59 Score: 4.6 Sequence: ACGAATTGATTTCAA Position: -37 Score: 4.7 Sequence: ATGAACAAAATTCAT Locus tag: Ssed_3556 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	Ssed_3556	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -247 Score: 4.6 Sequence: GTGAATTTTTTTCAT Locus tag: Ssed_2666 Name: ilvI Funciton: Acetolactate synthase large subunit (EC 2.2.1.6) Locus tag: Ssed_2667 Name: ilvH Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
	Ssed_2666	ilvI	Acetolactate synthase large subunit (EC 2.2.1.6)
	Ssed_2667	ilvH	Acetolactate synthase small subunit (EC 2.2.1.6)
Position: -218 Score: 4.4 Sequence: TTGAATTGTCTTCAA Position: -199 Score: 4.1 Sequence: ATGAGTTTCCTTCGA Locus tag: Ssed_1271 Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
	Ssed_1271	glyA	Serine hydroxymethyltransferase (EC 2.1.2.1)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD