Regulon of MetR in Shewanella loihica PV-4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shew_2987
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Shewanellaceae
Statistics of regulated genes:
- Genes	6
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 117 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -122 Score: 4 Sequence: ATGAACATTTCTCAG Locus tag: Shew_1185 Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
	Shew_1185	glyA	Serine hydroxymethyltransferase (EC 2.1.2.1)
Position: -189 Score: 4.6 Sequence: ATGAATTTGGCTCAT Position: -167 Score: 4.4 Sequence: GTGAAATCAATTCGA Locus tag: Shew_2986 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	Shew_2986	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -153 Score: 4.5 Sequence: TTGAGCTAAGTTCAC Locus tag: Shew_2882 Name: luxS Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
	Shew_2882	luxS	S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Position: -178 Score: 4.6 Sequence: ATGAGAGAAATTCAT Position: -48 Score: 4.4 Sequence: TCGAATTGATTTCAC Position: -26 Score: 4.6 Sequence: ATGAGCCAAATTCAT Locus tag: Shew_2987 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	Shew_2987	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -221 Score: 4.2 Sequence: GTGAGTTTTGCTCAA Locus tag: Shew_1776 Name: ilvI Funciton: Acetolactate synthase large subunit (EC 2.2.1.6) Locus tag: Shew_1775 Name: ilvH Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
	Shew_1776	ilvI	Acetolactate synthase large subunit (EC 2.2.1.6)
	Shew_1775	ilvH	Acetolactate synthase small subunit (EC 2.2.1.6)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD