Regulon of MetR in Shewanella frigidimarina NCIMB 400
| Regulator type: | Transcription factor |
| TF locus tag: | Sfri_0826 |
| Regulator family: | LysR |
| Regulation mode: | activator (repressor) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -212
Score: 3.7 Sequence: ATGTGCTGAACTCAA
Locus tag: Sfri_1033
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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Position: -48
Score: 4.6 Sequence: TCGAATTGATTTCAT
Position: -26
Score: 4.3 Sequence: TTGAGCAAGATTCAT
Locus tag: Sfri_0826
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Position: -236
Score: 4.9 Sequence: ATGAAATGATTTCAA
Locus tag: Sfri_1628
Name: ilvI Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: Sfri_1627
Name: ilvH Funciton: Acetolactate synthase small subunit (EC 2.2.1.6) |
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ilvI
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Acetolactate synthase large subunit (EC 2.2.1.6)
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ilvH
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Acetolactate synthase small subunit (EC 2.2.1.6)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |