Regulon of MetR in Shewanella denitrificans OS217

Properties
Regulator type:	Transcription factor
TF locus tag:	Sden_0731
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Shewanellaceae
Statistics of regulated genes:
- Genes	6
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 117 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -101 Score: 4.7 Sequence: TTGAAATCTATTCAT Locus tag: Sden_0981 Name: luxS Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
	Sden_0981	luxS	S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Position: -48 Score: 4.1 Sequence: TGGAAATAAATTCAG Position: -26 Score: 4.5 Sequence: ATGAGTGAAACTCAT Locus tag: Sden_0731 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	Sden_0731	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -146 Score: 4.5 Sequence: ATGAGTTTCACTCAT Position: -124 Score: 4.1 Sequence: CTGAATTTATTTCCA Locus tag: Sden_0732 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	Sden_0732	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -67 Score: 5.1 Sequence: ATGAAATTAATTCAT Locus tag: Sden_2521 Name: mdeA Funciton: Methionine gamma-lyase (EC 4.4.1.11)
	Sden_2521	mdeA	Methionine gamma-lyase (EC 4.4.1.11)
Position: -245 Score: 4.5 Sequence: ATGAATTTTACTCAC Position: -91 Score: 4.2 Sequence: TTGAAGTACCTTCAA Locus tag: Sden_2122 Name: ilvI Funciton: Acetolactate synthase large subunit (EC 2.2.1.6) Locus tag: Sden_2123 Name: ilvH Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
	Sden_2122	ilvI	Acetolactate synthase large subunit (EC 2.2.1.6)
	Sden_2123	ilvH	Acetolactate synthase small subunit (EC 2.2.1.6)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD