Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of MetR in Shewanella halifaxensis HAW-EB4

Properties
Regulator type: Transcription factor
TF locus tag: Shal_3283
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Methionine biosynthesis
Effector: Homocysteine
Regulog: MetR - Shewanellaceae
Statistics of regulated genes:
- Genes 4
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 117 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -162
Score: 4.3
Sequence: ATGAGCAAAATTCAG
Position: -48
Score: 4.3
Sequence: TCGAAACGAATTCAA
Locus tag: Shal_3283
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family

Position: -119
Score: 4
Sequence: ACGAAACTCTCTCAT
Locus tag: Shal_1203
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA
Serine hydroxymethyltransferase (EC 2.1.2.1)

Position: -244
Score: 4.3
Sequence: ATGAATGTTCTTCAT
Locus tag: Shal_2387
Name: ilvI
Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: Shal_2388
Name: ilvH
Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
ilvI
Acetolactate synthase large subunit (EC 2.2.1.6)
ilvH
Acetolactate synthase small subunit (EC 2.2.1.6)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD