Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of MetR in Shewanella sp ANA-3

Properties
Regulator type: Transcription factor
TF locus tag: Shewana3_3470
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Methionine biosynthesis
Effector: Homocysteine
Regulog: MetR - Shewanellaceae
Statistics of regulated genes:
- Genes 7
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 117 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -48
Score: 4.3
Sequence: CCGAATTGATTTCAA
Position: -26
Score: 4.4
Sequence: ATGAGCGAAATTCAC
Locus tag: Shewana3_3470
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family

Position: -120
Score: 4.2
Sequence: TTGAGGCGAGTTCAA
Locus tag: Shewana3_1094
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
glyA
Serine hydroxymethyltransferase (EC 2.1.2.1)

Position: -243
Score: 4.7
Sequence: ATGAAATTGTTTCAA
Position: -203
Score: 3.9
Sequence: TTGAAATGTGTTCTT
Locus tag: Shewana3_2269
Name: ilvI
Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: Shewana3_2270
Name: ilvH
Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
ilvI
Acetolactate synthase large subunit (EC 2.2.1.6)
ilvH
Acetolactate synthase small subunit (EC 2.2.1.6)

Position: -109
Score: 4.3
Sequence: TTGAGGCAAACTCAT
Locus tag: Shewana3_2414
Name: metC
Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
metC
Cystathionine beta-lyase (EC 4.4.1.8)

Position: -111
Score: 4.5
Sequence: GTGAGATGATTTCAT
Locus tag: Shewana3_0936
Name: luxS
Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
luxS
S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS

Position: -189
Score: 4.4
Sequence: GTGAATTTCGCTCAT
Position: -167
Score: 4.3
Sequence: TTGAAATCAATTCGG
Locus tag: Shewana3_3469
Name: metE
Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD