Regulon of MetR in Shewanella sp MR-7
| Regulator type: | Transcription factor |
| TF locus tag: | Shewmr7_0653 |
| Regulator family: | LysR |
| Regulation mode: | activator (repressor) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -189
Score: 4.4 Sequence: GTGAATTTCGCTCAT
Position: -167
Score: 4.3 Sequence: TTGAAATCAATTCGG
Locus tag: Shewmr7_0654
Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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metE
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Position: -48
Score: 4.3 Sequence: CCGAATTGATTTCAA
Position: -26
Score: 4.4 Sequence: ATGAGCGAAATTCAC
Locus tag: Shewmr7_0653
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Position: -120
Score: 4.2 Sequence: TTGAGGCGAGTTCAA
Locus tag: Shewmr7_1160
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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Position: -243
Score: 4.7 Sequence: ATGAAATTGTTTCAA
Position: -203
Score: 3.9 Sequence: TTGAAATGTGTTCTT
Locus tag: Shewmr7_1830
Name: ilvI Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: Shewmr7_1829
Name: ilvH Funciton: Acetolactate synthase small subunit (EC 2.2.1.6) |
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ilvI
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Acetolactate synthase large subunit (EC 2.2.1.6)
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ilvH
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Acetolactate synthase small subunit (EC 2.2.1.6)
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Position: -109
Score: 4.3 Sequence: TTGAGGCAAACTCAT
Locus tag: Shewmr7_2281
Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8) |
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metC
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Cystathionine beta-lyase (EC 4.4.1.8)
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Position: -111
Score: 4.8 Sequence: ATGAGATGATTTCAT
Locus tag: Shewmr7_0972
Name: luxS Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
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luxS
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S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |