Regulon of MetR in Shewanella oneidensis MR-1

Properties
Regulator type:	Transcription factor
TF locus tag:	SO0817
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Shewanellaceae
Statistics of regulated genes:
- Genes	7
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 117 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -48 Score: 4.3 Sequence: CCGAATTGATTTCAA Position: -26 Score: 4.4 Sequence: ATGAGCGAAATTCAC Locus tag: SO0817 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	SO0817	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -120 Score: 4.3 Sequence: TTGAGGTGCATTCAA Locus tag: SO3471 Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
	SO3471	glyA	Serine hydroxymethyltransferase (EC 2.1.2.1)
Position: -243 Score: 4.5 Sequence: ATGAAATTGTCTCAA Position: -203 Score: 3.9 Sequence: TTGAAATGTGTTCTT Locus tag: SO2279 Name: ilvI Funciton: Acetolactate synthase large subunit (EC 2.2.1.6) Locus tag: SO2278 Name: ilvH Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
	SO2279	ilvI	Acetolactate synthase large subunit (EC 2.2.1.6)
	SO2278	ilvH	Acetolactate synthase small subunit (EC 2.2.1.6)
Position: -110 Score: 4.3 Sequence: TTGAGGCAAACTCAT Locus tag: SO2191 Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
	SO2191	metC	Cystathionine beta-lyase (EC 4.4.1.8)
Position: -120 Score: 4.8 Sequence: ATGAGATGATTTCAT Locus tag: SO1101 Name: luxS Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
	SO1101	luxS	S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Position: -188 Score: 4.4 Sequence: GTGAATTTCGCTCAT Position: -166 Score: 4.3 Sequence: TTGAAATCAATTCGG Locus tag: SO0818 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	SO0818	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD