Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Mesorhizobium loti MAFF303099

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AfrR 1,5-Anhydro-d-Fructose utilization 2 4
TF AglR Alpha-glucoside; Maltose; Trehalose; Sucrose Alpha-glucosides utilization 2 3
TF BioR Biotin biosynthesis 4 1
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 1 1
TF CueR Copper ion, (Cu+) Copper resistance 1 1
TF EutR Ectoine utilization 9 4
TF FixJ Oxygen Oxidative stress response 4 2
TF FnrN/FixK/AadR Oxygen Oxidative stress response; Nitrogen fixation 16 6
TF GlcC Glycolate Glycolate utilization 3 3
TF HrcA Heat shock Heat shock response 5 5
TF HutC cis-Urocanic acid Histidine utilization 9 9
TF IolR Inositol utilization 2 4
TF Irr Heme Iron homeostasis 16 8
TF LexA DNA damage SOS response 22 15
TF LiuR Branched-chain amino acid degradation 8 6
TF Mll0059 3 2
TF Mll1683 Sugar utilization 3 1
TF Mll2434 1 1
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 2 2
TF MocR rhizopine Rhizopine catabolism 3 2
TF ModE Molybdate Molybdenum homeostasis 1 1
TF NadQ NAD biosynthesis 3 4
TF NagQ N-acetylglucosamine N-acetylglucosamine utilization 3 4
TF NifA Nitrogen fixation 16 14
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 8 2
TF PckR Central carbohydrate metabolism 17 11
TF PdxQ Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 2 2
TF PdxW Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 1 1
TF PhnF Phosphonate utilization 8 2
TF RhaR Rhamnose Rhamnose utilization 2 8
TF RirA Iron ion, (Fe2+) Iron homeostasis 10 8
TF RutR Uracil Pyrimidine utilization 9 6
TF SMb20039 1 1
TF SMb21598 Sugar utilization 2 3
TF SMb21706 Sugar utilization 1 2
TF SMc04260 Sugar utilization 2 2
TF SahR S-adenosylhomocysteine Methionine metabolism 6 4
TF SmoR Mannitol; Sorbitol Sorbitol utilization; Mannitol utilization 2 2
TF SoxR Paraquat Superoxide stress response 4 3
TF XylR Xylose Xylose utilization 5 5
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 4 1
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 10 6
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA Glycine Glycine Glycine metabolism 2 4
RNA SAM_alpha S-adenosylmethionine Methionine biosynthesis 2 2
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 3 3
RNA Trp_leader Tryptophan biosynthesis 1 1
RNA mini-ykkC Multidrug resistance 2 1
RNA serC Serine biosynthesis 1 1
RNA speF Ornithine degradation 1 1
RNA ybhL 1 1
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