Regulon of RirA in Mesorhizobium loti MAFF303099
| Regulator type: | Transcription factor |
| TF locus tag: | mlr1147 |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | RirA - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - Rrf2
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -84
Score: 5.1 Sequence: GTTGACTGTTGCAGTCATC
Position: -59
Score: 5 Sequence: GTTGACTTGTATACTCATG
Locus tag: mll4168
Name: exbB Funciton: Ferric siderophore transport system, proton channel protein ExbB
Locus tag: mll4167
Name: exbD Funciton: Ferric siderophore transport system, proton channel protein ExbD
Locus tag: mll4165
Name: tonB Funciton: Ferric siderophore transport system energy transducer |
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exbB
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Ferric siderophore transport system, proton channel protein ExbB
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exbD
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Ferric siderophore transport system, proton channel protein ExbD
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tonB
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Ferric siderophore transport system energy transducer
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Position: -121
Score: 3.8 Sequence: GTTGACTCGTTTACTCCGG
Position: -83
Score: 5.2 Sequence: CATGATTATTCAAGTCAAG
Locus tag: msl1154
Name: hmuP Funciton: Hemin ABC transporter, hemin uptake protein
Locus tag: mll1152
Name: hmuS Funciton: Hemin transport system, degrading protein
Locus tag: mll1151
Name: hmuT Funciton: Hemin ABC transporter, periplasmic protein
Locus tag: mll1150
Name: hmuU Funciton: Hemin ABC transporter, permease protein
Locus tag: mll1149
Name: hmuV Funciton: Hemin ABC transporter, ATPase protein |
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hmuP
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Hemin ABC transporter, hemin uptake protein
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hmuS
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Hemin transport system, degrading protein
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hmuT
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Hemin ABC transporter, periplasmic protein
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hmuU
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Hemin ABC transporter, permease protein
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hmuV
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Hemin ABC transporter, ATPase protein
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Position: -67
Score: 4.9 Sequence: GTTGACTATTCGTGTCATG
Locus tag: mlr3495
Name: fbpA Funciton: Ferric iron ABC transporter, periplasmic protein
Locus tag: mlr3497
Name: fbpB Funciton: Ferric iron ABC transporter, permease protein
Locus tag: mlr3498
Name: fbpC Funciton: Ferric iron ABC transporter, ATP-binding protein |
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fbpA
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Ferric iron ABC transporter, periplasmic protein
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fbpB
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Ferric iron ABC transporter, permease protein
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fbpC
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Ferric iron ABC transporter, ATP-binding protein
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Position: -28
Score: 3.9 Sequence: AATGAGAAAGCTTGTCATC
Locus tag: mlr7638
Name: cycF Funciton: Cytochrome c-556
Locus tag: mlr7639
Name: cycG Funciton: diheme cytochrome c-553 |
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cycF
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Cytochrome c-556
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cycG
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diheme cytochrome c-553
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Position: -172
Score: 4.6 Sequence: GTTGACGAGAATATTCATC
Locus tag: mlr1147
Name: rirA Funciton: Iron-responsive transcriptional repressor, Rrf2 family |
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rirA
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Iron-responsive transcriptional repressor, Rrf2 family
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Position: -83
Score: 5.2 Sequence: CTTGACTTGAATAATCATG
Locus tag: mlr1155
Name: hmuR Funciton: TonB-dependent iron siderophore receptor protein
Locus tag: mlr1156
Name: null Funciton: hypothetical protein |
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hmuR
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TonB-dependent iron siderophore receptor protein
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hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |