Regulon of PckR in Mesorhizobium loti MAFF303099
| Regulator type: | Transcription factor |
| TF locus tag: | mlr5161 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Central carbohydrate metabolism |
| Effector: | |
| Regulog: | PckR - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 25 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - LacI
- By pathway - Central carbohydrate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -40
Score: 5 Sequence: TTCCTAAATCGATTGGAATT
Locus tag: mll3821
Name: COG5480 Funciton: Predicted integral membrane protein
Locus tag: mll3819
Name: pykA Funciton: Pyruvate kinase (EC 2.7.1.40) |
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COG5480
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Predicted integral membrane protein
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pykA
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Pyruvate kinase (EC 2.7.1.40)
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Position: -160
Score: 5 Sequence: AATTCCAATCGATTTAGGAA
Locus tag: mlr3822
Name: COG3931 Funciton: Predicted N-formylglutamate amidohydrolase
Locus tag: mlr3823
Name: COG3492 Funciton: hypothetical protein |
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COG3931
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Predicted N-formylglutamate amidohydrolase
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COG3492
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hypothetical protein
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Position: -30
Score: 4.4 Sequence: TCTGCTAATCGGTTGAAATG
Locus tag: mlr2994
Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) / 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) |
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eda
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2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) / 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16)
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Position: -48
Score: 5.4 Sequence: CATCTAAATCGATTGAATAT
Locus tag: mlr7586
Name: glgP Funciton: Glycogen phosphorylase (EC 2.4.1.1)
Locus tag: mlr7587
Name: glgB Funciton: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
Locus tag: mlr7588
Name: glgC Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: mlr7589
Name: glgA Funciton: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Locus tag: mlr7590
Name: pgm Funciton: Phosphoglucomutase (EC 5.4.2.2) |
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glgP
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Glycogen phosphorylase (EC 2.4.1.1)
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glgB
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1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
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glgC
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Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
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glgA
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Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
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pgm
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Phosphoglucomutase (EC 5.4.2.2)
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Position: -179
Score: 4.9 Sequence: CCATCTAACCGATTGAAAAT
Locus tag: mll4308
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: mll4306
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: mll4305
Name: null Funciton: Mannose-6-phosphate isomerase
Locus tag: mll4304
Name: RL4437 Funciton: hypothetical protein
Locus tag: mll4303
Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: mll4302
Name: null Funciton: unknown protein
Locus tag: mll4301
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: mll4300
Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
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mdh
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Malate dehydrogenase (EC 1.1.1.37)
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sucC
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Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
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Mannose-6-phosphate isomerase
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RL4437
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hypothetical protein
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sucD
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Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
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unknown protein
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sucA
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2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
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sucB
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Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
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Position: -62
Score: 5.6 Sequence: AATTTAAATCGATTAGAATA
Locus tag: mll6516
Name: zwf Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: mll6514
Name: pgl Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: mll6512
Name: edd Funciton: Phosphogluconate dehydratase (EC 4.2.1.12) |
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zwf
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Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
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pgl
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6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
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edd
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Phosphogluconate dehydratase (EC 4.2.1.12)
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Position: -86
Score: 4.7 Sequence: ACTTTCAATCGATTCGAGCT
Locus tag: mlr3754
Name: fba Funciton: Fructose-bisphosphate aldolase class I (EC 4.1.2.13) |
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fba
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Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
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Position: -152
Score: 4.9 Sequence: ATATATAAACGATTTAAACA
Position: -122
Score: 5.1 Sequence: TTTTTAAATCGATTAATGAT
Locus tag: mlr5096
Name: pckA Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
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pckA
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Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
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Position: -128
Score: 5 Sequence: TGGTTCAATCGATTGATATT
Locus tag: mll0929
Name: glpX Funciton: Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) |
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glpX
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Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)
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Position: -104
Score: 5.3 Sequence: GATTTAAATCGGTTTAAACC
Locus tag: mll3969
Name: pyc Funciton: Pyruvate carboxyl transferase (EC 6.4.1.1) |
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pyc
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Pyruvate carboxyl transferase (EC 6.4.1.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |