Profile of regulator PckR in Rhizobiales
Properties
| Regulator family: |
LacI |
| Regulation mode: |
repressor |
| Biological process: |
Central carbohydrate metabolism |
| Effector: |
|
| Regulog: |
PckR - Rhizobiales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Agrobacterium tumefaciens str. C58 (Cereon)
|
|
Atu3740 |
fba |
-90 |
5 |
CATTTCAATCGTTTCAATGA |
|
Atu3740 |
fba |
-109 |
5.4 |
AGTTTCAAACGATTGAAATC |
|
Atu0035 |
pckA |
-127 |
5.4 |
CTTTTAAATCGATTAATATA |
|
Atu2639 |
mdh |
-136 |
5.1 |
TGATCTAAACGATTGAAAAT |
|
Atu0035 |
pckA |
-157 |
5.1 |
GTCTTCAACCGATTTAAAAA |
|
Atu0600 |
zwf |
-56 |
5.5 |
TTTTTAAATCGATTAGATTA |
|
Atu0185 |
mgsA |
-40 |
5.3 |
GCTTCAAATCGATTTAATTC |
|
Atu2645 |
sdhC |
-163 |
4.8 |
TGAACCAATCGATTAAATTC |
|
Atu4505 |
pckR |
-69 |
4.1 |
TGTTTAAATTGTTTAATTGC |
|
Atu4494 |
eda |
-36 |
5 |
GATTTCAATCGTTTCAATCG |
|
Atu3760 |
COG3931 |
-135 |
4.8 |
GAGTTTAATCGATTATATTG |
|
Atu3761 |
COG5480 |
-23 |
4.8 |
CAATATAATCGATTAAACTC |
|
Atu0401 |
scrK |
-51 |
5.2 |
CGTCTAAATCGATTTAAGTT |
|
Azorhizobium caulinodans ORS 571
|
|
AZC_4063 |
pckA |
-128 |
5.2 |
AAATTCAAACGATTTGAACG |
|
AZC_4207 |
hpr |
-100 |
5.1 |
TGATTAAAACGATTGAACTA |
|
Rhizobium etli CFN 42
|
|
RHE_CH03500 |
fba |
-128 |
5.2 |
CCTTTCAAACGATTGAATTG |
|
RHE_CH03500 |
fba |
-109 |
5 |
GATTTCAATCGTTTCAATGA |
|
RHE_CH00037 |
pckA |
-128 |
5.4 |
AATTTAAATCGATTAATTAT |
|
RHE_CH03891 |
mdh |
-132 |
5 |
GCATCTAAACGATTGAAAAT |
|
RHE_CH00037 |
pckA |
-158 |
5.2 |
CTCTTCAAACGATTTAAAAA |
|
RHE_CH00704 |
zwf |
-57 |
5.5 |
TTTTTAAATCGATTAGATTA |
|
RHE_CH00173 |
mgsA |
-40 |
5.3 |
CGATCAAATCGATTGAATTG |
|
RHE_CH03897 |
sdhC |
-169 |
4.6 |
AACCCGAATCGATTAAATTA |
|
RHE_CH03622 |
pckR |
-65 |
4 |
TGGTTAAATCTTTTAATTAA |
|
RHE_CH03635 |
eda |
-32 |
4.8 |
AATTTCAATCGTTTCAAGGA |
|
RHE_CH03544 |
COG3931 |
-137 |
4.5 |
AATGCTAATCGATTATATTT |
|
RHE_CH03543 |
COG5480 |
-81 |
4.5 |
AAATATAATCGATTAGCATT |
|
RHE_CH00475 |
scrK |
-47 |
4.7 |
TCGCTTAATCGATTGAAGAA |
|
Rhizobium leguminosarum bv. viciae 3841
|
|
RL4012 |
fba |
-137 |
4.9 |
GAATTCAATCGTTTCAATGA |
|
RL4012 |
fba |
-156 |
5.3 |
ACTTTCAAACGATTGAATTG |
|
RL4439 |
mdh |
-135 |
5.1 |
GTATCTAAACGATTGAAAAC |
|
RL0037 |
pckA |
-158 |
5.5 |
CTATTCAAACGATTTAAAAT |
|
RL0037 |
pckA |
-128 |
5.4 |
AATTTAAATCGATTAATTAT |
|
RL0753 |
zwf |
-57 |
5.5 |
TTTTTAAATCGATTAGATTA |
|
RL0183 |
mgsA |
-39 |
5.1 |
CGGTCAAATCGATTGAATTG |
|
RL4446 |
sdhC |
-168 |
4.4 |
AACGCGAATCGATTAAATTA |
|
RL4145 |
pckR |
-88 |
4.1 |
CGATTAAATCTTTTAATTAA |
|
RL4162 |
eda |
-32 |
4.7 |
GAATTCAATCGTTTCAAGGA |
|
RL4062 |
COG3931 |
-140 |
4.5 |
AATGCTAATCGATTATATTT |
|
RL4061 |
COG5480 |
-81 |
4.5 |
AAATATAATCGATTAGCATT |
|
Rhizobium sp. NGR234
|
|
NGR_c31300 |
mdh |
-138 |
4.9 |
TGATCTAACCGATTGAATTT |
|
NGR_c33940 |
pckA |
-157 |
5.1 |
CGATTCAACCGATTAAAAAA |
|
NGR_c33940 |
pckA |
-127 |
5.3 |
TCTTTAAATCGATTAATATA |
|
NGR_c29180 |
pckR |
-65 |
4.1 |
TGATTTAAACAGTTTAAAGA |
|
NGR_c03190 |
zwf |
-56 |
5.4 |
CTTTTAAATCGATTAGATTA |
|
NGR_c34840 |
mgsA |
-73 |
5.3 |
CACTCAAATCGATTTAAATG |
|
NGR_c31370 |
sdhC |
-162 |
4.6 |
TCGTCTAATCGATTTTATTT |
|
NGR_c29340 |
eda |
-30 |
5.4 |
AGATTCAATCGTTTTAAAAG |
|
NGR_c28370 |
COG3931 |
-222 |
4.7 |
AACTCTAATCGATTATATTT |
|
NGR_c28360 |
COG5480 |
-92 |
4.7 |
AAATATAATCGATTAGAGTT |
|
NGR_c28100 |
fba |
-164 |
5.1 |
TTTTTAAATCGTTTTAGTCG |
|
NGR_c28100 |
fba |
-183 |
5.5 |
TATTTCAAACGATTAAATTT |
|
Sinorhizobium meliloti 1021
|
|
SMc03983 |
fba |
-181 |
5.5 |
CTTTTCAAACGATTAAAATT |
|
SMc02495 |
null |
-203 |
4.7 |
CGAATAAATCGGTTGAATCA |
|
SMc03983 |
fba |
-162 |
4.9 |
TATTTAAATCGTTTTAGCCC |
|
SMc02479 |
mdh |
-140 |
5 |
CGATCTAACCGATTGAAATT |
|
SMc02562 |
pckA |
-157 |
5.1 |
CGATTCAACCGATTAAAAAA |
|
SMc02562 |
pckA |
-127 |
5.3 |
TCTTTAAATCGATTAATATA |
|
SMc03070 |
zwf |
-55 |
5.5 |
ATTTTAAATCGATTAGATTA |
|
SMc02834 |
mgsA |
-86 |
5.3 |
CCTTCAAATCGATTTAAACG |
|
SMc02463 |
sdhC |
-160 |
5 |
CCGTCAAATCGATTAAATTG |
|
SMc02975 |
pckR |
-59 |
4.2 |
TAATTTAAACAGTTTAAAGG |
|
SMc03153 |
eda |
-30 |
5.4 |
TTATTCAATCGTTTTAAAAG |
|
SMc04007 |
COG3931 |
-120 |
4.7 |
AACTCTAATCGATTATAATC |
|
SMc04006 |
COG5480 |
-129 |
4.7 |
GATTATAATCGATTAGAGTT |
|
Xanthobacter autotrophicus Py2
|
|
Xaut_1176 |
gnd |
-56 |
4.6 |
CATGTTAAACGATTTAACGG |
|
Xaut_2843 |
pckA |
-127 |
4.3 |
GCCTTCAATCGGTTAGAGAG |
|
Xaut_1698 |
edd |
-95 |
5 |
GGATCAAATCGATTTGATCG |
|
Xaut_1177 |
pckR |
-69 |
4.6 |
CCGTTAAATCGTTTAACATG |
|
Xaut_0504 |
hpr |
-151 |
5.4 |
AATTTAAAACGATTGAACTT |
|
Mesorhizobium loti MAFF303099
|
|
mlr5096 |
pckA |
-152 |
4.9 |
ATATATAAACGATTTAAACA |
|
mlr3754 |
fba |
-86 |
4.7 |
ACTTTCAATCGATTCGAGCT |
|
mlr5096 |
pckA |
-122 |
5.1 |
TTTTTAAATCGATTAATGAT |
|
mlr2994 |
eda |
-30 |
4.4 |
TCTGCTAATCGGTTGAAATG |
|
mll6516 |
zwf |
-62 |
5.6 |
AATTTAAATCGATTAGAATA |
|
mll4308 |
mdh |
-179 |
4.9 |
CCATCTAACCGATTGAAAAT |
|
mlr7586 |
glgP |
-48 |
5.4 |
CATCTAAATCGATTGAATAT |
|
mlr3822 |
COG3931 |
-160 |
5 |
AATTCCAATCGATTTAGGAA |
|
mll3821 |
COG5480 |
-40 |
5 |
TTCCTAAATCGATTGGAATT |
|
mll3969 |
pyc |
-104 |
5.3 |
GATTTAAATCGGTTTAAACC |
|
mll0929 |
glpX |
-128 |
5 |
TGGTTCAATCGATTGATATT |
|
Mesorhizobium sp. BNC1
|
|
Meso_3502 |
pckA |
-162 |
4.5 |
GCGTTTAAACGATTTAGTGA |
|
Meso_3436 |
fba |
-86 |
4.8 |
CATTTCAATCGATTAGGGAG |
|
Meso_3502 |
pckA |
-132 |
5.5 |
TTTTTAAATCGATTAAAGAA |
|
Meso_0159 |
zwf |
-53 |
5.2 |
TTATTAAATCGATTAGACTA |
|
Meso_3395 |
mdh |
-158 |
5 |
CCATCTAAACGATTGAAAAA |
|
Meso_3595 |
mgsA |
-40 |
4.8 |
AGCTTCAATCGATTTAGGAG |
|
Meso_3246 |
sdhC |
-157 |
4.7 |
AACTTCAATCGATTCAGTCG |
|
Meso_0989 |
glpX |
-129 |
5 |
TTATTCAATCGATTCATATT |
|
Brucella melitensis 16M
|
|
BMEI0244 |
null |
-59 |
5 |
GAATTAAATGGTTTTAAATT |
|
BMEI0137 |
mdh |
-155 |
5 |
AAATCTAACCGATTGAAAAC |
|
BMEI2037 |
pckA |
-149 |
4.6 |
CGGGTTAAACGATTTAAAAA |
|
BMEI2037 |
pckA |
-120 |
5.8 |
ATTTTAAATCGATTAAATAT |
|
BMEII0513 |
zwf |
-94 |
5.5 |
AATTTAAATCGATTAGATAT |
|
BMEII0252 |
mgsA |
-59 |
4.9 |
GATTTAAAACGATTTAGCCG |
|
BMEII0009 |
eda |
-75 |
5.4 |
GATTTAAATCGATTTATAAG |
|
BMEI1833 |
scrK |
-47 |
5.5 |
ATTTTCAATCGATTTAACAG |
|
BMEI0726 |
glpX |
-158 |
4.6 |
GCTCTAAATCGATTAAGGCT |
|
BMEI1636 |
pgi |
-32 |
5.4 |
AGATTAAATCGATTTGATTC |
Export
|
Regulatory Sites
|
[ FASTA format ]
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