Regulon of LexA in Mesorhizobium loti MAFF303099
| Regulator type: | Transcription factor |
| TF locus tag: | mlr0626 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 14 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -16
Score: 5 Sequence: GTTCACGTTTTGATC
Locus tag: mlr4857
Name: rmuC Funciton: DNA recombination protein RmuC |
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rmuC
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DNA recombination protein RmuC
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Position: -60
Score: 4.9 Sequence: GTTCTGGGTTTGTTT
Locus tag: mlr0626
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -167
Score: 4.9 Sequence: GTTCGGCCTTTGTTC
Locus tag: mlr0750
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Position: -175
Score: 5.6 Sequence: GTTCTTGCTTTGTTC
Locus tag: mll7417
Name: PF04055 Funciton: Radical SAM domain protein |
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PF04055
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Radical SAM domain protein
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Position: -139
Score: 1.5 Sequence: GTACGAAAAAAGAAC
Position: -73
Score: 1.3 Sequence: GAACAAAAAAGGTAC
Locus tag: mlr0030
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -30
Score: -0.5 Sequence: GAACAAAGCGGAAAC
Locus tag: mlr7946
Name: uvrD2 Funciton: ATP-dependent DNA helicase II |
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uvrD2
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ATP-dependent DNA helicase II
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Position: -116
Score: 0.4 Sequence: GAACGAAAAGGGAAC
Locus tag: mll0743
Name: ssb Funciton: Single-stranded DNA-binding protein |
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ssb
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Single-stranded DNA-binding protein
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Position: -86
Score: 1.1 Sequence: GAACGTAACAGGAAC
Locus tag: mlr0901
Name: parE Funciton: Topoisomerase IV subunit B (EC 5.99.1.-) |
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parE
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Topoisomerase IV subunit B (EC 5.99.1.-)
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Position: -142
Score: 0 Sequence: GAACAAAACGTAGAC
Locus tag: mlr1503
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -39
Score: 1.2 Sequence: GAACATAACAGGAAC
Locus tag: mlr4426
Name: imuA Funciton: Predicted RecA/RadA recombinase |
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imuA
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Predicted RecA/RadA recombinase
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Position: -122
Score: 4.6 Sequence: GTTCCCTTTACGTTC
Locus tag: mll1421
Name: PF01443 Funciton: RecD-like DNA helicase Atu2026 |
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PF01443
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RecD-like DNA helicase Atu2026
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Position: -71
Score: 4.7 Sequence: GTTTTCTTTTTGTAC
Locus tag: mll2568
Name: greA Funciton: Transcription elongation factor GreA |
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greA
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Transcription elongation factor GreA
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Position: -21
Score: 5.2 Sequence: GTTCTCTTTATGTTC
Locus tag: mlr0866
Name: dinP Funciton: DNA polymerase IV (EC 2.7.7.7) |
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dinP
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DNA polymerase IV (EC 2.7.7.7)
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Position: -58
Score: 4.8 Sequence: GTTTCCGGTTTGTTC
Locus tag: mll3901
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
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ruvC
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Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |