Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator LexA in Rhizobiales

Properties
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Rhizobiales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Sinorhizobium meliloti 1021
SMc01235 uvrA -143 5.6 GTTCTTTTTTTGTTC
SMc00866 PF04055 -79 5.7 GTTCTTGATTTGTTC
SMc03967 ruvC -58 5.4 GTTTTTGTTTTGTTC
SMc00420 yifB -153 4.7 GTTCTATCATTGTTC
SMc01183 lexA -35 5.5 GTTCTTGATTTGTTT
SMc01461 uvrD -58 0.3 GAATAAAAGAAGAAC
SMc01102 rmuC -49 5.2 GTTCTCGTTTTGATC
SMc01375 dnaE -273 0.5 GAACAAAAAGGGAAC
SMa0888 imuA -61 0.7 GAACAAATACAGAAC
SMc00760 recA -73 1.9 GAACAAAACATGTAC
SMc00760 recA -141 2 GAACAAGAATCGAAC
SMa2321 uvrD2 -59 4.3 GTTCCCCCTCCGTTC
SMc01018 parE -132 4.6 ATTCGCCTTTTGTTC
SMc04231 uvrB -60 4.5 GTTTCCCTTTTGTAC
SMc02819 rna -36 5.3 GTTCCTGTTTTGTTT
SMc01373 dinP -9 4.6 GTTCCGGATATGATC
SMc01373 dinP -20 5 GTTCAACATTTGTTC
SMc03790 imuA -36 1.8 GAACATAACATGAAC
SMc01233 ssb -158 0.8 GAACAAAAAAAGAAC
Rhizobium sp. NGR234
NGR_c15070 lexA 18 5.5 GTTCTTGATTTGTTT
NGR_c15570 uvrA -141 5.5 GTTCTTTCTTTGTTC
NGR_c27930 ruvC -58 5.4 GTTTTTGTTTTGTTC
NGR_c36840 yifB -97 4.8 GTTCTATTATTGTTC
NGR_c04530 PF04055 -81 5.6 GTTCTTGCTTTGTTC
NGR_c20770 uvrD -58 0.3 GAATAAAAGAAGAAC
NGR_c00550 rmuC -50 5.3 GTTCTTGTTTTGATC
NGR_c10730 dnaE -254 0.8 GAACAAAAAAAGAAC
NGR_c16470 recA -74 1.9 GAACAAAACATGTAC
NGR_c16470 recA -142 2.1 GAACAGGAATCGAAC
NGR_b14150 uvrD2 -90 4.6 GTTCCTTATCCGTTC
NGR_c12710 parE -134 4.6 ATTCGCCTTTTGTTC
NGR_c17500 uvrB -61 4.5 GTTTCCCTTTTGTAC
NGR_c21340 rna -30 5.1 GTTCTCGTTATGTTT
NGR_c10750 dinP -143 5 GTTCAACATTTGTTC
NGR_c31880 imuA -36 1.8 GAACATAACATGAAC
NGR_c15580 ssb -157 0.5 GAACAAAGAAAGAAC
Rhizobium leguminosarum bv. viciae 3841
RL2398 uvrA -139 5.6 GTTCTTTATTTGTTC
RL0931 PF04055 -85 5.1 GTTCTTGCATTGTTC
RL3986 ruvC -58 5.4 GTTTTTGTTTTGTTC
RL0339 yifB -94 5 GTTCTTGTTTTATTC
RL0339 yifB -105 4.6 GTTCCTTGATTGTTC
RL2236 lexA -37 5.2 GTTCTGGATTTGTTT
RL0607 uvrD2 -63 1.5 GAACATTCAAGGAAC
RL3276 uvrD -58 0 GAATGAAAGCAGAAC
RL0428 rmuC -49 5 GTTCACGTTTTGATC
RL4618 mgpS -224 0.9 GAACAAAAGCTGAAT
RL1723 dnaE -241 0.2 GAACAAATTGAAAAC
RL2115 imuA -47 0.5 GAACAAATAGGGAAC
RL2637 recA -62 0.9 GAACAAATAGGGTAC
RL2637 recA -130 -0.1 AAACAAATGCAGAAC
RL3422 greA -247 4.9 GTTCACTATATGTTC
RL2957 uvrB -60 4.5 GTTTCCCTTTTGTAC
RL3334 rna 10 5 GTTCCTGTATTGTTC
RL1725 dinP -122 5 GTTCAATCTTTGTTC
RL4699 imuA -35 1.2 GAACATAACAGGAAC
RL2399 ssb -138 0.8 GAACAAATAAAGAAC
Rhizobium etli CFN 42
RHE_CH04085 imuA -37 1.2 GAACATAACAGGAAC
RHE_CH02107 uvrA -139 5.6 GTTCTTTATTTGTTC
RHE_CH00869 PF04055 -85 5.1 GTTCTTGCATTGTTC
RHE_CH03478 ruvC -59 5.4 GTTTTTGTTTTGTTC
RHE_CH00323 yifB -94 5 GTTCTTGTTTTATTC
RHE_CH01928 lexA -84 5.2 GTTCTGGATTTGTTT
RHE_CH00573 uvrD2 -63 1.5 GAACATTCAAGGAAC
RHE_CH02819 uvrD -109 0 GAATGAAAGCAGAAC
RHE_CH00410 rmuC -235 5 GTTCACGTTTTGATC
RHE_CH04022 mgpS -244 0.9 GAACAAAAGCTGAAT
RHE_CH01627 dnaE -253 1.1 GAACAAACATGGAAC
RHE_PF00150 imuA -59 0.8 GAACAAATAAAGAAC
RHE_CH02323 recA -62 0.7 GAACAAATGGGGTAC
RHE_CH02323 recA -130 0.4 AAACAAATGTAGAAC
RHE_CH02969 greA -246 4.9 GTTCACTATATGTTC
RHE_CH02563 uvrB -162 4.5 GTTTCCCTTTTGTAC
RHE_CH02874 rna -31 4.9 GTTCCTGCATTGTTC
RHE_CH01629 dinP -20 5 GTTCAACCTTTGTTC
RHE_CH02108 ssb -160 0.8 GAACAAATAAAGAAC
Agrobacterium tumefaciens str. C58 (Cereon)
Atu1513 uvrA -149 5.4 GTTCCTTTTTTGTTC
Atu0721 PF04055 -179 5.2 GTTCTTGTATTGTTC
Atu3724 ruvC -58 5 GTTGTCGTTTTGTTC
Atu0311 yifB -97 5 GTTCTTGTTTTATTC
Atu0311 yifB -170 4.4 GCTCCCGGTTTGTTC
Atu1395 lexA -52 5.1 GTTCTGTATTTGTTT
Atu1874 recA -74 0.8 GAACAAATAGAGTAC
Atu1874 recA -142 -0.2 AAACGAAAGCAGAAC
Atu1077 radA -24 -0.4 AAACAAGAAGAAAAC
Atu2057 uvrD -57 0.1 GAATAAAAGCAGAAC
Atu0365 rmuC -9 5.3 GTTCTTGTTTTGATC
Atu2753 mgpS -291 0.5 GAACAAAAACGGAAT
Atu1292 dnaE -239 0.9 GAACAAAATGAGAAC
Atu5098 imuA -76 1.4 GAACAAACAATGAAC
Atu3230 imuA -53 0.8 GAACAAAACAAGAAC
Atu2026 PF01443 -58 4.5 ATTCATCTTTCGTTC
Atu4619 uvrD2 -134 5.1 GTTCAGCATTTGTTC
Atu2182 greA -215 4.9 GTTCACTATATGTTC
Atu2001 uvrB -71 4.5 GTTTCCTTTTTGTAC
Atu1294 dinP -88 5.2 GTTCTGGTTTTGTTT
Atu1512 ssb -172 0.9 GAACAAAAAAGGAAC
Mesorhizobium sp. BNC1
Meso_3265 imuA -30 1.2 GAACATAACAGGAAC
Meso_1396 uvrA -175 5.2 GTTCGTTCTTTGTTC
Meso_0704 PF04055 -77 5.7 GTTCTTGATTTGTTC
Meso_3583 yifB -77 4.9 GTTCTTGATCTGATC
Meso_1642 lexA -38 4.9 GTTCTGGGTTTGTTT
Meso_1397 ssb -171 0.9 GAACAAAAAAGGAAC
Meso_1015 parE -88 0.7 GAACGGAACCGGAAC
Meso_1988 uvrD -54 0.4 GTACAAAAAGAAAAC
Meso_0418 rmuC -51 5 GTTCACGATTTGATC
Meso_3376 mgpS -175 0.4 GAACAAAAACAGAAT
Meso_3807 imuA -52 0.4 GAACAAATAGAGAAC
Meso_1263 recA -73 0.9 GAACAAAACGGGTAC
Meso_1263 recA -140 0.6 AAACAAAAAACGAAC
Meso_1686 xthA -17 4.5 GTTCTGGATTCGTGC
Meso_2118 greA -58 4.3 GTTTTCTTTTTGTGT
Meso_1344 dinP -27 5.3 GTTCTTCTTATGTTC
Mesorhizobium loti MAFF303099
mlr4426 imuA -39 1.2 GAACATAACAGGAAC
mlr0750 uvrA -167 4.9 GTTCGGCCTTTGTTC
mll7417 PF04055 -175 5.6 GTTCTTGCTTTGTTC
mll3901 ruvC -58 4.8 GTTTCCGGTTTGTTC
mlr0626 lexA -60 4.9 GTTCTGGGTTTGTTT
mlr0030 recA -73 1.3 GAACAAAAAAGGTAC
mlr0030 recA -139 1.5 GTACGAAAAAAGAAC
mlr7946 uvrD2 -30 -0.5 GAACAAAGCGGAAAC
mll0743 ssb -116 0.4 GAACGAAAAGGGAAC
mlr0901 parE -86 1.1 GAACGTAACAGGAAC
mlr1503 uvrD -142 0 GAACAAAACGTAGAC
mlr4857 rmuC -16 5 GTTCACGTTTTGATC
mll1421 PF01443 -122 4.6 GTTCCCTTTACGTTC
mll2568 greA -71 4.7 GTTTTCTTTTTGTAC
mlr0866 dinP -21 5.2 GTTCTCTTTATGTTC
Brucella melitensis 16M
BMEI1874 imuA -66 1.4 GAACATAAAGTGAAC
BMEI0878 uvrA -156 5 GTTCGATATTTGTTC
BMEI1541 PF04055 -85 5.7 GTTCTTGATTTGTTC
BMEI0332 ruvC -60 5.1 GTTTCTCTTTTGTTC
BMEII0263 rmuC -251 5.2 GTTCCTGTTTTGATC
BMEI0840 lexA -45 5.2 GTTCTGGTTTTGTTT
BMEII0676 parE -143 1 GAACGTAAAGCGAAC
BMEI0840 lexA -71 1.7 GAACAAGACTGGAAC
BMEI0275 mgpS -220 -0 GAACAAATACAGAAA
BMEI0787 recA -73 0.5 GAACAAAACAGATAC
BMEI0787 recA -138 1.7 GAACAAGAATGGAAC
BMEI0880 ssb -202 0.9 GAACAAAACAGGAAC
BMEI0508 greA -149 4.3 GTTTTCTTTTTGTGT
BMEII0656 dinP -35 5.1 GTTCCTTTTATGTTC
Bartonella quintana str. Toulouse
BQ12130 mgpS -60 1.3 GAACAAAAAATGAAT
Rhodopseudomonas palustris CGA009
RPA3851 recA -102 1.6 GAACATATTGCGAAC
RPA2903 lexA 6 5.2 GTTCATGATTTGTTT
RPA2816 uvrA -97 5.1 GTTCTTCCTATGTTC
RPA1099 ruvC -44 4.5 GTTGCTATTTTGTTC
RPA0318 yifB -67 4.4 GTTCACTTAATGTTC
RPA1033 PF04055 -38 5.7 GTTCTTGATTTGTTC
RPA2802 uvrD2 -53 0.4 GAACAAAGCAGGAAT
RPA3089 radA -54 1.6 GAACAAAATGTGAAC
RPA0620 rmuC -18 4.8 GTTCTATCTTCGTTC
RPA3851 recA -84 0.7 GAACAAATGGGGTAC
RPA4380 rna -63 4.5 GTTCTTGAAACGTTC
RPA1801 imuA -76 1.8 GAACATATCATGAAC
RPA2814 ssb -229 1.1 GAACAAAAATAGAAC
Bradyrhizobium japonicum USDA 110
blr4826 lexA -88 5.2 GTTCATGATTTGTTT
blr4702 uvrA -112 4.8 GTTCTTCCTACGTTC
blr1535 ruvC -47 4.6 GTTCTGTTTCTGTTT
bll0661 yifB -74 4.9 GTTCCCGTATTGTTC
blr2519 PF04055 -38 5.7 GTTCTTGATTTGTTC
blr8110 rmuC -15 4.8 GTTCGCTATTCGTTC
bll5755 recA -90 0.9 GAACAAATAGGGTAC
bll5755 recA -108 1.6 GAACATATTGCGAAC
blr4761 xthA -21 4.5 GTTTGCATTTTGTTC
blr7466 rna -63 4.9 GTTCTTGAAATGTTC
blr3024 imuA -81 1.8 GAACATATCATGAAC
bll4698 ssb -169 1.2 GAACAAATCTGGAAC
Bradyrhizobium sp. BTAi1
BBta_4496 lexA -124 5.2 GTTCATGATTTGTTT
BBta_4379 uvrA -108 4.8 GTTCTTCCTACGTTC
BBta_6909 ruvC -47 4.6 GTTCCGTTTATGTTT
BBta_0136 yifB -62 5.1 GTTCTTGCATTGTTC
BBta_2341 PF04055 -98 4.9 GTTCTTGTAATGTTC
BBta_7338 rmuC -47 5.1 GTTCTCTATTCGTTC
BBta_5453 recA -89 1 GAACAGATCGGGTAC
BBta_5453 recA -107 1.6 GAACATATTGCGAAC
BBta_2985 imuA -96 1.7 GAACGTATCATGAAC
BBta_1732 rna -57 4.9 GTTCTTGAAATGTTC
BBta_4373 ssb -174 1.2 GAACAAAACTGGAAC
Nitrobacter winogradskyi Nb-255
Nwi_1280 recA -106 1.6 GAACATATTGCGAAC
Nwi_1841 lexA -108 5.2 GTTCATGATTTGTTT
Nwi_1568 uvrA -122 4.5 GTTCTATCTACGTTC
Nwi_0118 yifB -67 4.6 GTTCTCTTAATGTTC
Nwi_2600 PF04055 -38 5.6 GTTCTTGCTTTGTTC
Nwi_1860 dnaE -294 0.5 GAACAAATAGGGAAC
Nwi_2257 imuA -61 1.4 GAACATATAGTGAAC
Nwi_1280 recA -88 0.7 GAACAAATGGGGTAC
Nwi_1566 ssb -199 1.1 GAACAAATATAGAAC
Azorhizobium caulinodans ORS 571
AZC_2855 recA -61 1.1 GAACAAATGAGGTAC
AZC_2855 recA -79 1.6 GAACATATTGCGAAC
AZC_2201 lexA -80 5.3 GTTCCTGATTTGTTT
AZC_2887 uvrA -21 5 GTTCTATTTATGTTC
AZC_4342 yifB -80 4.3 GTTCGCAATCTGTTC
AZC_0799 rmuC -44 4.9 GTTCGCTGTTTGTTC
AZC_0428 PF04055 2 5.4 GTTCTTGTTTCGTTC
AZC_2201 lexA -106 0.1 GAACAAACAAGAAAC
AZC_2886 ssb -187 1.4 GAACATAAATAGAAC
AZC_3127 uvrB -61 4.6 GGTCCCCTTTTGTTC
AZC_3906 imuA -20 0.5 GAACAAAACGGGAAC
AZC_2886 ssb -265 1.1 GAACGTAACAGGAAC
Xanthobacter autotrophicus Py2
Xaut_4080 recA -62 1.6 GAACAAAGCATGTAC
Xaut_4080 recA -80 1.6 GAACATATTGCGAAC
Xaut_4371 lexA -51 5.2 GTTCATGATTTGTTT
Xaut_4315 uvrA -291 5.2 GTTCCTGATATGTTC
Xaut_0335 yifB -75 4.8 GTTCCGCTTTCGTTC
Xaut_3306 rmuC -42 4.9 GTTCGCTGTTTGTTC
Xaut_1946 PF04055 -40 5.4 GTTCTTGTTTCGTTC
Xaut_4371 lexA -77 1.1 GAACACAAAAGGAAC
Xaut_0810 imuA -63 0.8 GAACAAATAAAGAAC
Xaut_4757 parE -108 4.6 GTTTCCGTTCTGTTC
Xaut_3470 imuA -18 0.7 GAACAAAAGAGGAAC
Xaut_4316 ssb -151 1.7 GAACACATCATGAAC
Xaut_4316 ssb -252 1.2 GAACATATCAGGAAC
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