Profile of regulator LexA in Rhizobiales
Properties
| Regulator family: |
LexA |
| Regulation mode: |
repressor |
| Biological process: |
SOS response |
| Effector: |
DNA damage |
| Regulog: |
LexA - Rhizobiales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Sinorhizobium meliloti 1021
|
|
SMc01235 |
uvrA |
-143 |
5.6 |
GTTCTTTTTTTGTTC |
|
SMc00866 |
PF04055 |
-79 |
5.7 |
GTTCTTGATTTGTTC |
|
SMc03967 |
ruvC |
-58 |
5.4 |
GTTTTTGTTTTGTTC |
|
SMc00420 |
yifB |
-153 |
4.7 |
GTTCTATCATTGTTC |
|
SMc01183 |
lexA |
-35 |
5.5 |
GTTCTTGATTTGTTT |
|
SMc01461 |
uvrD |
-58 |
0.3 |
GAATAAAAGAAGAAC |
|
SMc01102 |
rmuC |
-49 |
5.2 |
GTTCTCGTTTTGATC |
|
SMc01375 |
dnaE |
-273 |
0.5 |
GAACAAAAAGGGAAC |
|
SMa0888 |
imuA |
-61 |
0.7 |
GAACAAATACAGAAC |
|
SMc00760 |
recA |
-73 |
1.9 |
GAACAAAACATGTAC |
|
SMc00760 |
recA |
-141 |
2 |
GAACAAGAATCGAAC |
|
SMa2321 |
uvrD2 |
-59 |
4.3 |
GTTCCCCCTCCGTTC |
|
SMc01018 |
parE |
-132 |
4.6 |
ATTCGCCTTTTGTTC |
|
SMc04231 |
uvrB |
-60 |
4.5 |
GTTTCCCTTTTGTAC |
|
SMc02819 |
rna |
-36 |
5.3 |
GTTCCTGTTTTGTTT |
|
SMc01373 |
dinP |
-9 |
4.6 |
GTTCCGGATATGATC |
|
SMc01373 |
dinP |
-20 |
5 |
GTTCAACATTTGTTC |
|
SMc03790 |
imuA |
-36 |
1.8 |
GAACATAACATGAAC |
|
SMc01233 |
ssb |
-158 |
0.8 |
GAACAAAAAAAGAAC |
|
Rhizobium sp. NGR234
|
|
NGR_c15070 |
lexA |
18 |
5.5 |
GTTCTTGATTTGTTT |
|
NGR_c15570 |
uvrA |
-141 |
5.5 |
GTTCTTTCTTTGTTC |
|
NGR_c27930 |
ruvC |
-58 |
5.4 |
GTTTTTGTTTTGTTC |
|
NGR_c36840 |
yifB |
-97 |
4.8 |
GTTCTATTATTGTTC |
|
NGR_c04530 |
PF04055 |
-81 |
5.6 |
GTTCTTGCTTTGTTC |
|
NGR_c20770 |
uvrD |
-58 |
0.3 |
GAATAAAAGAAGAAC |
|
NGR_c00550 |
rmuC |
-50 |
5.3 |
GTTCTTGTTTTGATC |
|
NGR_c10730 |
dnaE |
-254 |
0.8 |
GAACAAAAAAAGAAC |
|
NGR_c16470 |
recA |
-74 |
1.9 |
GAACAAAACATGTAC |
|
NGR_c16470 |
recA |
-142 |
2.1 |
GAACAGGAATCGAAC |
|
NGR_b14150 |
uvrD2 |
-90 |
4.6 |
GTTCCTTATCCGTTC |
|
NGR_c12710 |
parE |
-134 |
4.6 |
ATTCGCCTTTTGTTC |
|
NGR_c17500 |
uvrB |
-61 |
4.5 |
GTTTCCCTTTTGTAC |
|
NGR_c21340 |
rna |
-30 |
5.1 |
GTTCTCGTTATGTTT |
|
NGR_c10750 |
dinP |
-143 |
5 |
GTTCAACATTTGTTC |
|
NGR_c31880 |
imuA |
-36 |
1.8 |
GAACATAACATGAAC |
|
NGR_c15580 |
ssb |
-157 |
0.5 |
GAACAAAGAAAGAAC |
|
Rhizobium leguminosarum bv. viciae 3841
|
|
RL2398 |
uvrA |
-139 |
5.6 |
GTTCTTTATTTGTTC |
|
RL0931 |
PF04055 |
-85 |
5.1 |
GTTCTTGCATTGTTC |
|
RL3986 |
ruvC |
-58 |
5.4 |
GTTTTTGTTTTGTTC |
|
RL0339 |
yifB |
-94 |
5 |
GTTCTTGTTTTATTC |
|
RL0339 |
yifB |
-105 |
4.6 |
GTTCCTTGATTGTTC |
|
RL2236 |
lexA |
-37 |
5.2 |
GTTCTGGATTTGTTT |
|
RL0607 |
uvrD2 |
-63 |
1.5 |
GAACATTCAAGGAAC |
|
RL3276 |
uvrD |
-58 |
0 |
GAATGAAAGCAGAAC |
|
RL0428 |
rmuC |
-49 |
5 |
GTTCACGTTTTGATC |
|
RL4618 |
mgpS |
-224 |
0.9 |
GAACAAAAGCTGAAT |
|
RL1723 |
dnaE |
-241 |
0.2 |
GAACAAATTGAAAAC |
|
RL2115 |
imuA |
-47 |
0.5 |
GAACAAATAGGGAAC |
|
RL2637 |
recA |
-62 |
0.9 |
GAACAAATAGGGTAC |
|
RL2637 |
recA |
-130 |
-0.1 |
AAACAAATGCAGAAC |
|
RL3422 |
greA |
-247 |
4.9 |
GTTCACTATATGTTC |
|
RL2957 |
uvrB |
-60 |
4.5 |
GTTTCCCTTTTGTAC |
|
RL3334 |
rna |
10 |
5 |
GTTCCTGTATTGTTC |
|
RL1725 |
dinP |
-122 |
5 |
GTTCAATCTTTGTTC |
|
RL4699 |
imuA |
-35 |
1.2 |
GAACATAACAGGAAC |
|
RL2399 |
ssb |
-138 |
0.8 |
GAACAAATAAAGAAC |
|
Rhizobium etli CFN 42
|
|
RHE_CH04085 |
imuA |
-37 |
1.2 |
GAACATAACAGGAAC |
|
RHE_CH02107 |
uvrA |
-139 |
5.6 |
GTTCTTTATTTGTTC |
|
RHE_CH00869 |
PF04055 |
-85 |
5.1 |
GTTCTTGCATTGTTC |
|
RHE_CH03478 |
ruvC |
-59 |
5.4 |
GTTTTTGTTTTGTTC |
|
RHE_CH00323 |
yifB |
-94 |
5 |
GTTCTTGTTTTATTC |
|
RHE_CH01928 |
lexA |
-84 |
5.2 |
GTTCTGGATTTGTTT |
|
RHE_CH00573 |
uvrD2 |
-63 |
1.5 |
GAACATTCAAGGAAC |
|
RHE_CH02819 |
uvrD |
-109 |
0 |
GAATGAAAGCAGAAC |
|
RHE_CH00410 |
rmuC |
-235 |
5 |
GTTCACGTTTTGATC |
|
RHE_CH04022 |
mgpS |
-244 |
0.9 |
GAACAAAAGCTGAAT |
|
RHE_CH01627 |
dnaE |
-253 |
1.1 |
GAACAAACATGGAAC |
|
RHE_PF00150 |
imuA |
-59 |
0.8 |
GAACAAATAAAGAAC |
|
RHE_CH02323 |
recA |
-62 |
0.7 |
GAACAAATGGGGTAC |
|
RHE_CH02323 |
recA |
-130 |
0.4 |
AAACAAATGTAGAAC |
|
RHE_CH02969 |
greA |
-246 |
4.9 |
GTTCACTATATGTTC |
|
RHE_CH02563 |
uvrB |
-162 |
4.5 |
GTTTCCCTTTTGTAC |
|
RHE_CH02874 |
rna |
-31 |
4.9 |
GTTCCTGCATTGTTC |
|
RHE_CH01629 |
dinP |
-20 |
5 |
GTTCAACCTTTGTTC |
|
RHE_CH02108 |
ssb |
-160 |
0.8 |
GAACAAATAAAGAAC |
|
Agrobacterium tumefaciens str. C58 (Cereon)
|
|
Atu1513 |
uvrA |
-149 |
5.4 |
GTTCCTTTTTTGTTC |
|
Atu0721 |
PF04055 |
-179 |
5.2 |
GTTCTTGTATTGTTC |
|
Atu3724 |
ruvC |
-58 |
5 |
GTTGTCGTTTTGTTC |
|
Atu0311 |
yifB |
-97 |
5 |
GTTCTTGTTTTATTC |
|
Atu0311 |
yifB |
-170 |
4.4 |
GCTCCCGGTTTGTTC |
|
Atu1395 |
lexA |
-52 |
5.1 |
GTTCTGTATTTGTTT |
|
Atu1874 |
recA |
-74 |
0.8 |
GAACAAATAGAGTAC |
|
Atu1874 |
recA |
-142 |
-0.2 |
AAACGAAAGCAGAAC |
|
Atu1077 |
radA |
-24 |
-0.4 |
AAACAAGAAGAAAAC |
|
Atu2057 |
uvrD |
-57 |
0.1 |
GAATAAAAGCAGAAC |
|
Atu0365 |
rmuC |
-9 |
5.3 |
GTTCTTGTTTTGATC |
|
Atu2753 |
mgpS |
-291 |
0.5 |
GAACAAAAACGGAAT |
|
Atu1292 |
dnaE |
-239 |
0.9 |
GAACAAAATGAGAAC |
|
Atu5098 |
imuA |
-76 |
1.4 |
GAACAAACAATGAAC |
|
Atu3230 |
imuA |
-53 |
0.8 |
GAACAAAACAAGAAC |
|
Atu2026 |
PF01443 |
-58 |
4.5 |
ATTCATCTTTCGTTC |
|
Atu4619 |
uvrD2 |
-134 |
5.1 |
GTTCAGCATTTGTTC |
|
Atu2182 |
greA |
-215 |
4.9 |
GTTCACTATATGTTC |
|
Atu2001 |
uvrB |
-71 |
4.5 |
GTTTCCTTTTTGTAC |
|
Atu1294 |
dinP |
-88 |
5.2 |
GTTCTGGTTTTGTTT |
|
Atu1512 |
ssb |
-172 |
0.9 |
GAACAAAAAAGGAAC |
|
Mesorhizobium sp. BNC1
|
|
Meso_3265 |
imuA |
-30 |
1.2 |
GAACATAACAGGAAC |
|
Meso_1396 |
uvrA |
-175 |
5.2 |
GTTCGTTCTTTGTTC |
|
Meso_0704 |
PF04055 |
-77 |
5.7 |
GTTCTTGATTTGTTC |
|
Meso_3583 |
yifB |
-77 |
4.9 |
GTTCTTGATCTGATC |
|
Meso_1642 |
lexA |
-38 |
4.9 |
GTTCTGGGTTTGTTT |
|
Meso_1397 |
ssb |
-171 |
0.9 |
GAACAAAAAAGGAAC |
|
Meso_1015 |
parE |
-88 |
0.7 |
GAACGGAACCGGAAC |
|
Meso_1988 |
uvrD |
-54 |
0.4 |
GTACAAAAAGAAAAC |
|
Meso_0418 |
rmuC |
-51 |
5 |
GTTCACGATTTGATC |
|
Meso_3376 |
mgpS |
-175 |
0.4 |
GAACAAAAACAGAAT |
|
Meso_3807 |
imuA |
-52 |
0.4 |
GAACAAATAGAGAAC |
|
Meso_1263 |
recA |
-73 |
0.9 |
GAACAAAACGGGTAC |
|
Meso_1263 |
recA |
-140 |
0.6 |
AAACAAAAAACGAAC |
|
Meso_1686 |
xthA |
-17 |
4.5 |
GTTCTGGATTCGTGC |
|
Meso_2118 |
greA |
-58 |
4.3 |
GTTTTCTTTTTGTGT |
|
Meso_1344 |
dinP |
-27 |
5.3 |
GTTCTTCTTATGTTC |
|
Mesorhizobium loti MAFF303099
|
|
mlr4426 |
imuA |
-39 |
1.2 |
GAACATAACAGGAAC |
|
mlr0750 |
uvrA |
-167 |
4.9 |
GTTCGGCCTTTGTTC |
|
mll7417 |
PF04055 |
-175 |
5.6 |
GTTCTTGCTTTGTTC |
|
mll3901 |
ruvC |
-58 |
4.8 |
GTTTCCGGTTTGTTC |
|
mlr0626 |
lexA |
-60 |
4.9 |
GTTCTGGGTTTGTTT |
|
mlr0030 |
recA |
-73 |
1.3 |
GAACAAAAAAGGTAC |
|
mlr0030 |
recA |
-139 |
1.5 |
GTACGAAAAAAGAAC |
|
mlr7946 |
uvrD2 |
-30 |
-0.5 |
GAACAAAGCGGAAAC |
|
mll0743 |
ssb |
-116 |
0.4 |
GAACGAAAAGGGAAC |
|
mlr0901 |
parE |
-86 |
1.1 |
GAACGTAACAGGAAC |
|
mlr1503 |
uvrD |
-142 |
0 |
GAACAAAACGTAGAC |
|
mlr4857 |
rmuC |
-16 |
5 |
GTTCACGTTTTGATC |
|
mll1421 |
PF01443 |
-122 |
4.6 |
GTTCCCTTTACGTTC |
|
mll2568 |
greA |
-71 |
4.7 |
GTTTTCTTTTTGTAC |
|
mlr0866 |
dinP |
-21 |
5.2 |
GTTCTCTTTATGTTC |
|
Brucella melitensis 16M
|
|
BMEI1874 |
imuA |
-66 |
1.4 |
GAACATAAAGTGAAC |
|
BMEI0878 |
uvrA |
-156 |
5 |
GTTCGATATTTGTTC |
|
BMEI1541 |
PF04055 |
-85 |
5.7 |
GTTCTTGATTTGTTC |
|
BMEI0332 |
ruvC |
-60 |
5.1 |
GTTTCTCTTTTGTTC |
|
BMEII0263 |
rmuC |
-251 |
5.2 |
GTTCCTGTTTTGATC |
|
BMEI0840 |
lexA |
-45 |
5.2 |
GTTCTGGTTTTGTTT |
|
BMEII0676 |
parE |
-143 |
1 |
GAACGTAAAGCGAAC |
|
BMEI0840 |
lexA |
-71 |
1.7 |
GAACAAGACTGGAAC |
|
BMEI0275 |
mgpS |
-220 |
-0 |
GAACAAATACAGAAA |
|
BMEI0787 |
recA |
-73 |
0.5 |
GAACAAAACAGATAC |
|
BMEI0787 |
recA |
-138 |
1.7 |
GAACAAGAATGGAAC |
|
BMEI0880 |
ssb |
-202 |
0.9 |
GAACAAAACAGGAAC |
|
BMEI0508 |
greA |
-149 |
4.3 |
GTTTTCTTTTTGTGT |
|
BMEII0656 |
dinP |
-35 |
5.1 |
GTTCCTTTTATGTTC |
|
Bartonella quintana str. Toulouse
|
|
BQ12130 |
mgpS |
-60 |
1.3 |
GAACAAAAAATGAAT |
|
Rhodopseudomonas palustris CGA009
|
|
RPA3851 |
recA |
-102 |
1.6 |
GAACATATTGCGAAC |
|
RPA2903 |
lexA |
6 |
5.2 |
GTTCATGATTTGTTT |
|
RPA2816 |
uvrA |
-97 |
5.1 |
GTTCTTCCTATGTTC |
|
RPA1099 |
ruvC |
-44 |
4.5 |
GTTGCTATTTTGTTC |
|
RPA0318 |
yifB |
-67 |
4.4 |
GTTCACTTAATGTTC |
|
RPA1033 |
PF04055 |
-38 |
5.7 |
GTTCTTGATTTGTTC |
|
RPA2802 |
uvrD2 |
-53 |
0.4 |
GAACAAAGCAGGAAT |
|
RPA3089 |
radA |
-54 |
1.6 |
GAACAAAATGTGAAC |
|
RPA0620 |
rmuC |
-18 |
4.8 |
GTTCTATCTTCGTTC |
|
RPA3851 |
recA |
-84 |
0.7 |
GAACAAATGGGGTAC |
|
RPA4380 |
rna |
-63 |
4.5 |
GTTCTTGAAACGTTC |
|
RPA1801 |
imuA |
-76 |
1.8 |
GAACATATCATGAAC |
|
RPA2814 |
ssb |
-229 |
1.1 |
GAACAAAAATAGAAC |
|
Bradyrhizobium japonicum USDA 110
|
|
blr4826 |
lexA |
-88 |
5.2 |
GTTCATGATTTGTTT |
|
blr4702 |
uvrA |
-112 |
4.8 |
GTTCTTCCTACGTTC |
|
blr1535 |
ruvC |
-47 |
4.6 |
GTTCTGTTTCTGTTT |
|
bll0661 |
yifB |
-74 |
4.9 |
GTTCCCGTATTGTTC |
|
blr2519 |
PF04055 |
-38 |
5.7 |
GTTCTTGATTTGTTC |
|
blr8110 |
rmuC |
-15 |
4.8 |
GTTCGCTATTCGTTC |
|
bll5755 |
recA |
-90 |
0.9 |
GAACAAATAGGGTAC |
|
bll5755 |
recA |
-108 |
1.6 |
GAACATATTGCGAAC |
|
blr4761 |
xthA |
-21 |
4.5 |
GTTTGCATTTTGTTC |
|
blr7466 |
rna |
-63 |
4.9 |
GTTCTTGAAATGTTC |
|
blr3024 |
imuA |
-81 |
1.8 |
GAACATATCATGAAC |
|
bll4698 |
ssb |
-169 |
1.2 |
GAACAAATCTGGAAC |
|
Bradyrhizobium sp. BTAi1
|
|
BBta_4496 |
lexA |
-124 |
5.2 |
GTTCATGATTTGTTT |
|
BBta_4379 |
uvrA |
-108 |
4.8 |
GTTCTTCCTACGTTC |
|
BBta_6909 |
ruvC |
-47 |
4.6 |
GTTCCGTTTATGTTT |
|
BBta_0136 |
yifB |
-62 |
5.1 |
GTTCTTGCATTGTTC |
|
BBta_2341 |
PF04055 |
-98 |
4.9 |
GTTCTTGTAATGTTC |
|
BBta_7338 |
rmuC |
-47 |
5.1 |
GTTCTCTATTCGTTC |
|
BBta_5453 |
recA |
-89 |
1 |
GAACAGATCGGGTAC |
|
BBta_5453 |
recA |
-107 |
1.6 |
GAACATATTGCGAAC |
|
BBta_2985 |
imuA |
-96 |
1.7 |
GAACGTATCATGAAC |
|
BBta_1732 |
rna |
-57 |
4.9 |
GTTCTTGAAATGTTC |
|
BBta_4373 |
ssb |
-174 |
1.2 |
GAACAAAACTGGAAC |
|
Nitrobacter winogradskyi Nb-255
|
|
Nwi_1280 |
recA |
-106 |
1.6 |
GAACATATTGCGAAC |
|
Nwi_1841 |
lexA |
-108 |
5.2 |
GTTCATGATTTGTTT |
|
Nwi_1568 |
uvrA |
-122 |
4.5 |
GTTCTATCTACGTTC |
|
Nwi_0118 |
yifB |
-67 |
4.6 |
GTTCTCTTAATGTTC |
|
Nwi_2600 |
PF04055 |
-38 |
5.6 |
GTTCTTGCTTTGTTC |
|
Nwi_1860 |
dnaE |
-294 |
0.5 |
GAACAAATAGGGAAC |
|
Nwi_2257 |
imuA |
-61 |
1.4 |
GAACATATAGTGAAC |
|
Nwi_1280 |
recA |
-88 |
0.7 |
GAACAAATGGGGTAC |
|
Nwi_1566 |
ssb |
-199 |
1.1 |
GAACAAATATAGAAC |
|
Azorhizobium caulinodans ORS 571
|
|
AZC_2855 |
recA |
-61 |
1.1 |
GAACAAATGAGGTAC |
|
AZC_2855 |
recA |
-79 |
1.6 |
GAACATATTGCGAAC |
|
AZC_2201 |
lexA |
-80 |
5.3 |
GTTCCTGATTTGTTT |
|
AZC_2887 |
uvrA |
-21 |
5 |
GTTCTATTTATGTTC |
|
AZC_4342 |
yifB |
-80 |
4.3 |
GTTCGCAATCTGTTC |
|
AZC_0799 |
rmuC |
-44 |
4.9 |
GTTCGCTGTTTGTTC |
|
AZC_0428 |
PF04055 |
2 |
5.4 |
GTTCTTGTTTCGTTC |
|
AZC_2201 |
lexA |
-106 |
0.1 |
GAACAAACAAGAAAC |
|
AZC_2886 |
ssb |
-187 |
1.4 |
GAACATAAATAGAAC |
|
AZC_3127 |
uvrB |
-61 |
4.6 |
GGTCCCCTTTTGTTC |
|
AZC_3906 |
imuA |
-20 |
0.5 |
GAACAAAACGGGAAC |
|
AZC_2886 |
ssb |
-265 |
1.1 |
GAACGTAACAGGAAC |
|
Xanthobacter autotrophicus Py2
|
|
Xaut_4080 |
recA |
-62 |
1.6 |
GAACAAAGCATGTAC |
|
Xaut_4080 |
recA |
-80 |
1.6 |
GAACATATTGCGAAC |
|
Xaut_4371 |
lexA |
-51 |
5.2 |
GTTCATGATTTGTTT |
|
Xaut_4315 |
uvrA |
-291 |
5.2 |
GTTCCTGATATGTTC |
|
Xaut_0335 |
yifB |
-75 |
4.8 |
GTTCCGCTTTCGTTC |
|
Xaut_3306 |
rmuC |
-42 |
4.9 |
GTTCGCTGTTTGTTC |
|
Xaut_1946 |
PF04055 |
-40 |
5.4 |
GTTCTTGTTTCGTTC |
|
Xaut_4371 |
lexA |
-77 |
1.1 |
GAACACAAAAGGAAC |
|
Xaut_0810 |
imuA |
-63 |
0.8 |
GAACAAATAAAGAAC |
|
Xaut_4757 |
parE |
-108 |
4.6 |
GTTTCCGTTCTGTTC |
|
Xaut_3470 |
imuA |
-18 |
0.7 |
GAACAAAAGAGGAAC |
|
Xaut_4316 |
ssb |
-151 |
1.7 |
GAACACATCATGAAC |
|
Xaut_4316 |
ssb |
-252 |
1.2 |
GAACATATCAGGAAC |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
