Regulon of RhaR in Mesorhizobium loti MAFF303099

Properties
Regulator type:	Transcription factor
TF locus tag:	mll5707
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Regulog:	RhaR - Rhizobiales
Statistics of regulated genes:
- Genes	9
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - DeoR
By effector - Rhamnose
By pathway - Rhamnose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -113 Score: 6.4 Sequence: TCAATCA-(3)-ACGATCA Position: -107 Score: 5.2 Sequence: ATAAACG-(3)-AAGATCG Position: -103 Score: 6.7 Sequence: ACGATCA-(3)-TCGATCA Position: -62 Score: 6.7 Sequence: ATGATCG-(3)-ATGATTG Locus tag: mll5707 Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family Locus tag: mll5706 Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein Locus tag: mll5705 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: mll5704 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: mll5703 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: mll5702 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: mll5701 Name: rhaK Funciton: putative rhamnulokinase
	mll5707	rhaR	Predicted transcriptional regulator for rhamnose utilization, DeoR family
	mll5706	rhaF	L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
	mll5705	rhaG	L-rhamnose ABC transporter, duplicated ATP-binding component
	mll5704	rhaH	L-rhamnose ABC transporter, permease component 1
	mll5703	rhaJ	L-rhamnose ABC transporter, permease component 2
	mll5702	rhaM	L-rhamnose mutarotase
	mll5701	rhaK	putative rhamnulokinase
Position: -150 Score: 5.4 Sequence: ACGAGCA-(3)-TCAATCA Position: -140 Score: 5.8 Sequence: TCAATCA-(3)-CCGATCA Position: -99 Score: 6.9 Sequence: ATGATCG-(3)-TTGATCG Position: -89 Score: 6.7 Sequence: TTGATCG-(3)-ATGATTG Locus tag: mlr5708 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: mlr5709 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
	mlr5708	rhaEW	Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22)
	mlr5709	rhaI	L-rhamnose isomerase (EC 5.3.1.14)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD