Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator RhaR in Rhizobiales

Properties
Regulator family: DeoR
Regulation mode: repressor
Biological process: Rhamnose utilization
Effector: Rhamnose
Regulog: RhaR - Rhizobiales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Sinorhizobium meliloti 1021
SMc02322 rhaEW -104 6.7 TTGATCG-(3)-TTGATTG
SMc02323 rhaR -63 5.8 ATGATTG-(3)-GTGATTG
SMc02323 rhaR -53 5.3 GTGATTG-(3)-ATGCTCG
SMc02322 rhaEW -114 6.3 ATGAACG-(3)-TTGATCG
SMc02322 rhaEW -155 6 TCAATCA-(3)-TCAATCA
SMc02323 rhaR -114 6.4 TCAATCA-(3)-ACGATCA
Rhizobium sp. NGR234
NGR_c02430 rhaEW -105 6.1 CTGATCG-(3)-TTGATTG
NGR_c02440 rhaR -53 5.3 CTGATTG-(3)-ATGCTCG
NGR_c02440 rhaR -73 5.6 ATGAAAA-(3)-ATGATCG
NGR_c02440 rhaR -63 6.1 ATGATCG-(3)-CTGATTG
NGR_c02440 rhaR -114 6.4 TCAATCA-(3)-ACGATCA
NGR_c02430 rhaEW -156 6.4 TCAATCA-(3)-TCGATCA
NGR_c02430 rhaEW -115 5.7 ATGAACG-(3)-CTGATCG
Rhizobium leguminosarum bv. viciae 3841
pRL110414 rhaR -113 6.4 TCAATCG-(3)-ACGATCA
pRL110414 rhaR -103 6.4 ACGATCA-(3)-TCGATTA
pRL110414 rhaR -72 5.6 ATGAAAA-(3)-ATGATCG
pRL110414 rhaR -62 6.7 ATGATCG-(3)-TTGATTG
pRL110415 rhaEW -153 6.4 TCAATCA-(3)-ACGATCA
pRL110415 rhaEW -112 6.6 ATAATCG-(3)-TTGATCG
pRL110415 rhaEW -102 6.6 TTGATCG-(3)-TCGATTG
Rhizobium etli CFN 42
RHE_PE00290 rhaR -64 6.7 ATGATCG-(3)-ATGATTG
RHE_PE00290 rhaR -105 6.4 ACGATCA-(3)-TCGATTA
RHE_PE00290 rhaR -115 6.4 TCAATCG-(3)-ACGATCA
RHE_PE00291 rhaEW -101 6.6 TTGATCG-(3)-TCGATTG
RHE_PE00291 rhaEW -152 6.4 TCAATCA-(3)-ACGATCA
RHE_PE00291 rhaEW -111 6.6 ATAATCG-(3)-TTGATCG
Agrobacterium tumefaciens str. C58 (Cereon)
Atu3486 rhaR -111 6.4 TCAATCA-(3)-ACGATCA
Atu3486 rhaR -60 6.7 TTGATCG-(3)-TTGATTG
Atu3485 rhaEW -107 6.7 ATGATCG-(3)-TTGATTG
Atu3485 rhaEW -158 6.4 TCAATCA-(3)-ACGATCA
Atu3485 rhaEW -117 5.6 ATGAAAA-(3)-ATGATCG
Mesorhizobium loti MAFF303099
mll5707 rhaR -113 6.4 TCAATCA-(3)-ACGATCA
mll5707 rhaR -107 5.2 ATAAACG-(3)-AAGATCG
mll5707 rhaR -103 6.7 ACGATCA-(3)-TCGATCA
mll5707 rhaR -62 6.7 ATGATCG-(3)-ATGATTG
mlr5708 rhaEW -150 5.4 ACGAGCA-(3)-TCAATCA
mlr5708 rhaEW -140 5.8 TCAATCA-(3)-CCGATCA
mlr5708 rhaEW -99 6.9 ATGATCG-(3)-TTGATCG
mlr5708 rhaEW -89 6.7 TTGATCG-(3)-ATGATTG
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