Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Irr in Mesorhizobium loti MAFF303099

Properties
Regulator type: Transcription factor
TF locus tag: mlr5570
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Heme
Regulog: Irr - Rhizobiales
Statistics of regulated genes:
- Genes 20
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 122 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -50
Score: 6.2
Sequence: TATTTAGAACTATTCCAAACT
Locus tag: mll5315
Name: fssA
Funciton: putative nifU-like iron-sulphur cluster scaffold protein
mll5315
fssA
putative nifU-like iron-sulphur cluster scaffold protein
Position: -244
Score: 6.9
Sequence: AGTTTAGAATAATTCTAAACT
Locus tag: mlr5523
Name: iprA
Funciton: Iron-regulated protein A precursor
Locus tag: msr5525
Name: bfd
Funciton: [2Fe-2S]-binding protein, bacterioferritin
Locus tag: mlr5526
Name: bfr
Funciton: Bacterioferritin
mlr5523
iprA
Iron-regulated protein A precursor
msr5525
bfd
[2Fe-2S]-binding protein, bacterioferritin
mlr5526
bfr
Bacterioferritin
Position: -35
Score: 6.9
Sequence: AGTTTAGAACAATTCTAAACT
Locus tag: mlr4601
Name: mbfA
Funciton: membrane-bound ferritin
mlr4601
mbfA
membrane-bound ferritin
Position: -22
Score: 5.1
Sequence: AGTCTGGAATCGTTCCAGATT
Locus tag: mlr6940
Name: katG
Funciton: Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)
mlr6940
katG
Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)
Position: -150
Score: 6.6
Sequence: AGTTTAGAACTATTCAAAACT
Locus tag: mlr0015
Name: sufS2
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: mlr0016
Name: sufB
Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: mlr0017
Name: null
Funciton: unknown protein
Locus tag: mlr0019
Name: sufC
Funciton: ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
Locus tag: mlr0020
Name: sufD
Funciton: ABC transporter involved in Fe-S cluster assembly, permease protein
Locus tag: mlr0021
Name: sufS1
Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: mlr0023
Name: PF01883
Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly
Locus tag: mlr0024
Name: sufA
Funciton: Iron binding protein SufA for iron-sulfur cluster assembly
mlr0015
sufS2
Cysteine desulfurase (EC 2.8.1.7)
mlr0016
sufB
ABC transporter involved in Fe-S cluster assembly, permease protein
mlr0017
unknown protein
mlr0019
sufC
ABC transporter involved in Fe-S cluster assembly, ATP-binding protein
mlr0020
sufD
ABC transporter involved in Fe-S cluster assembly, permease protein
mlr0021
sufS1
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
mlr0023
PF01883
PaaD-like protein (DUF59) involved in Fe-S cluster assembly
mlr0024
sufA
Iron binding protein SufA for iron-sulfur cluster assembly
Position: -139
Score: 5.1
Sequence: AGTCTGGAATTGTTCCAAGGT
Locus tag: mlr1147
Name: rirA
Funciton: Iron-responsive transcriptional regulator RirA, Rrf2 family
mlr1147
rirA
Iron-responsive transcriptional regulator RirA, Rrf2 family
Position: -32
Score: 5.3
Sequence: AGCTTAGAAATCTTCAAAACT
Locus tag: mlr4647
Name: PF00033
Funciton: cytochrome b561
mlr4647
PF00033
cytochrome b561
Position: -86
Score: 5
Sequence: TTTCTGGAATAGTTCTAGACA
Locus tag: mll4333
Name: ccmA
Funciton: heme ABC transporter, ATPase subunit
Locus tag: mll4332
Name: ccmB
Funciton: heme ABC transporter, permease subunit
Locus tag: msl4331
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein, interacts with CcmCE
Locus tag: mll4330
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein, thiol:disulfide oxidoreductase
mll4333
ccmA
heme ABC transporter, ATPase subunit
mll4332
ccmB
heme ABC transporter, permease subunit
msl4331
ccmD
Cytochrome c-type biogenesis protein, interacts with CcmCE
mll4330
ccmG
Cytochrome c-type biogenesis protein, thiol:disulfide oxidoreductase
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