Regulon of XylR in Mesorhizobium loti MAFF303099
| Regulator type: | Transcription factor |
| TF locus tag: | mlr3714 |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Xylose utilization |
| Effector: | Xylose |
| Regulog: | XylR - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - XylR
- By taxonomy - Rhizobiales
- By TF family - ROK
- By effector - Xylose
- By pathway - Xylose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -44
Score: 5.9 Sequence: ATTTTTTCGAGACCCGAAAAAAA
Locus tag: mlr5033
Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17) |
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xylB
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Xylulose kinase (EC 2.7.1.17)
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Position: -209
Score: 5.6 Sequence: ATTTTTTCGAGCCTCGAAAAAAC
Position: -125
Score: 6 Sequence: TTTTTTTCGAGCCTCGGAATAAA
Locus tag: mlr3714
Name: xylR Funciton: Xylose repressor XylR, ROK family |
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xylR
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Xylose repressor XylR, ROK family
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Position: -171
Score: 6 Sequence: TTTATTCCGAGGCTCGAAAAAAA
Position: -87
Score: 5.6 Sequence: GTTTTTTCGAGGCTCGAAAAAAT
Locus tag: mll3713
Name: xylF Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
Locus tag: mll3711
Name: xylH Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: mll3710
Name: xylG Funciton: Xylose ABC transporter, ATP-binding protein XylG |
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xylF
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Xylose ABC transporter, periplasmic xylose-binding protein XylF
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xylH
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Xylose ABC transporter, permease protein XylH
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xylG
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Xylose ABC transporter, ATP-binding protein XylG
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |