Profile of regulator XylR in Rhizobiales
Properties
| Regulator family: |
ROK |
| Regulation mode: |
repressor |
| Biological process: |
Xylose utilization |
| Effector: |
Xylose |
| Regulog: |
XylR - Rhizobiales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Agrobacterium tumefaciens str. C58 (Cereon)
|
|
Atu3576 |
xylF |
-107 |
5.4 |
ATTTTCTCGACTGTCGAGAAAAT |
|
Atu3577 |
xylR |
-148 |
5.4 |
ATTTTCTCGACAGTCGAGAAAAT |
|
Rhizobium etli CFN 42
|
|
RHE_CH03172 |
xylF |
-104 |
4.9 |
AATTTCTCGACTGTCGAGAAAAT |
|
RHE_CH03171 |
xylR |
-244 |
4.9 |
ATTTTCTCGACAGTCGAGAAATT |
|
Rhizobium leguminosarum bv. viciae 3841
|
|
RL3624 |
xylF |
-106 |
5.1 |
AATTTCTCGACTGTCGAGAAAAA |
|
RL3623 |
xylR |
-144 |
5.1 |
TTTTTCTCGACAGTCGAGAAATT |
|
Rhizobium sp. NGR234
|
|
NGR_c24220 |
xylF |
-126 |
5.5 |
ATTTTCTCGACTGTCGAGAAAAA |
|
Sinorhizobium meliloti 1021
|
|
SMb20901 |
xylR |
-293 |
5.5 |
TTTTTCTCGACAGTCGAGAAAAT |
|
SMb20902 |
xylF |
-115 |
5.5 |
ATTTTCTCGACTGTCGAGAAAAA |
|
Mesorhizobium loti MAFF303099
|
|
mll3713 |
xylF |
-87 |
5.6 |
GTTTTTTCGAGGCTCGAAAAAAT |
|
mll3713 |
xylF |
-171 |
6 |
TTTATTCCGAGGCTCGAAAAAAA |
|
mlr3714 |
xylR |
-125 |
6 |
TTTTTTTCGAGCCTCGGAATAAA |
|
mlr3714 |
xylR |
-209 |
5.6 |
ATTTTTTCGAGCCTCGAAAAAAC |
|
mlr5033 |
xylB |
-44 |
5.9 |
ATTTTTTCGAGACCCGAAAAAAA |
|
Mesorhizobium sp. BNC1
|
|
Meso_3114 |
xylF |
-217 |
5.8 |
CTTTTTTCGAGGCTCGAAAAAAT |
|
Meso_3115 |
xylR |
-44 |
5.8 |
ATTTTTTCGAGCCTCGAAAAAAG |
|
Meso_2819 |
xylB |
-72 |
5.7 |
TTTGTTTCGAGTCTCGAAATAAT |
|
Bradyrhizobium japonicum USDA 110
|
|
bll2268 |
xylR |
-190 |
5 |
TTTTATTCACACAGCGAAGAAAT |
|
blr2269 |
xylF2 |
-54 |
5 |
ATTTCTTCGCTGTGTGAATAAAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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