Collection of regulogs involved in Cobalamin biosynthesis
Type | Phylum | Regulog | Regulons (studied genomes) | Regulatory sites |
---|---|---|---|---|
TF | Crenarchaeota | CblR - Sulfolobales | 5 (5) | 28 |
TF | Crenarchaeota | CblR - Thermoproteales | 4 (5) | 9 |
TF | Euryarchaeota | CblR - Halobacteriales | 11 (11) | 91 |
TF | Euryarchaeota | CblR - Thermococcales | 7 (7) | 82 |
RNA | Actinobacteria | Cobalamin - Corynebacteriaceae | 4 (8) | 6 |
RNA | Actinobacteria | Cobalamin - Mycobacteriaceae | 9 (9) | 21 |
RNA | Bacteroidetes | Cobalamin - Bacteroidaceae | 11 (11) | 65 |
RNA | Chlorobiales | Cobalamin - Chlorobiales | 11 (11) | 34 |
RNA | Chloroflexi | Cobalamin - Chloroflexia | 5 (5) | 13 |
RNA | Cyanobacteria | Cobalamin - Cyanobacteria | 11 (14) | 20 |
RNA | Deinococcus-Thermus | Cobalamin - Deinococcus-Thermus | 5 (5) | 12 |
RNA | Firmicutes | Cobalamin - Bacillales | 9 (11) | 18 |
RNA | Firmicutes | Cobalamin - Clostridiaceae | 19 (20) | 50 |
RNA | Firmicutes | Cobalamin - Lactobacillaceae | 1 (15) | 1 |
RNA | Proteobacteria | Cobalamin - Burkholderia | 8 (8) | 38 |
RNA | Proteobacteria | Cobalamin - Caulobacterales | 4 (4) | 7 |
RNA | Proteobacteria | Cobalamin - Enterobacteriales | 11 (12) | 16 |
RNA | Proteobacteria | Cobalamin - Pseudomonadaceae | 8 (8) | 33 |
RNA | Proteobacteria | Cobalamin - Ralstonia | 6 (6) | 7 |
RNA | Proteobacteria | Cobalamin - Rhizobiales | 14 (15) | 57 |
RNA | Proteobacteria | Cobalamin - Rhodobacterales | 15 (15) | 48 |
RNA | Proteobacteria | Cobalamin - Shewanellaceae | 16 (16) | 34 |
RNA | Proteobacteria | Cobalamin - Vibrionales | 10 (10) | 13 |
RNA | Proteobacteria/delta | Cobalamin - Desulfovibrionales | 9 (10) | 23 |
RNA | Thermotogae | Cobalamin - Thermotogales | 11 (11) | 20 |