Regulog Cobalamin - Pseudomonadaceae
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Pseudomonas aeruginosa PAO1 | 24 | 5 |
| Pseudomonas entomophila L48 | 23 | 6 |
| Pseudomonas putida KT2440 | 18 | 4 |
| Pseudomonas syringae pv. tomato str. DC3000 | 19 | 4 |
| Pseudomonas fluorescens Pf-5 | 22 | 5 |
| Pseudomonas mendocina ymp | 25 | 6 |
| Pseudomonas stutzeri A1501 | 14 | 2 |
| Azotobacter vinelandii AvOP | 11 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| btuB |
*
Pseudomonas aeruginosa PAO1 Site: position = -303 score = 112.86 sequence = CCATCCGGCCCGTTC... Gene: PA2911: Outer membrane vitamin B12 receptor BtuB |
*
Pseudomonas entomophila L48 Site: position = -315 score = 116.97 sequence = CAGATGCGCGCCAGT... Gene: PSEEN2012: Outer membrane vitamin B12 receptor BtuB |
*
Pseudomonas putida KT2440 Site: position = -258 score = 119.18 sequence = CAGATGCGCGCCAGT... Gene: PP2420: Outer membrane vitamin B12 receptor BtuB |
Gene: PSPTO5560: Outer membrane vitamin B12 receptor BtuB |
*2
Pseudomonas fluorescens Pf-5 Site: position = -154 score = 123.03 sequence = CATATGCGCGCCAGT... Gene: PFL_2970: Outer membrane vitamin B12 receptor BtuB Gene: PFL_0646: Outer membrane vitamin B12 receptor BtuB |
*
Pseudomonas mendocina ymp Site: position = -394 score = 118.91 sequence = TCATATCCGCCCCGC... Gene: Pmen_4567: Outer membrane vitamin B12 receptor BtuB |
|
|
Outer membrane vitamin B12 receptor BtuB |
| btuD |
Gene: PA2912: Vitamin B12 ABC transporter, ATPase component BtuD |
*
Pseudomonas entomophila L48 Site: position = -314 score = 109.02 sequence = ATGCGCCCCTTGTTT... Gene: PSEEN3066: Vitamin B12 ABC transporter, ATPase component BtuD |
|
Gene: PSPTO5561: Vitamin B12 ABC transporter, ATPase component BtuD |
Gene: PFL_0645: Vitamin B12 ABC transporter, ATPase component BtuD |
Gene: Pmen_4566: Vitamin B12 ABC transporter, ATPase component BtuD |
|
|
Vitamin B12 ABC transporter, ATPase component BtuD |
| btuF |
Gene: PA2913: Vitamin B12 ABC transporter, B12-binding component BtuF |
Gene: PSEEN3067: Vitamin B12 ABC transporter, B12-binding component BtuF |
|
Gene: PSPTO5562: Vitamin B12 ABC transporter, B12-binding component BtuF |
Gene: PFL_0644: Vitamin B12 ABC transporter, B12-binding component BtuF |
Gene: Pmen_4565: Vitamin B12 ABC transporter, B12-binding component BtuF |
|
|
Vitamin B12 ABC transporter, B12-binding component BtuF |
| btuC |
Gene: PA2914: Vitamin B12 ABC transporter, permease component BtuC |
Gene: PSEEN3068: Vitamin B12 ABC transporter, permease component BtuC |
|
Gene: PSPTO5563: Vitamin B12 ABC transporter, permease component BtuC |
Gene: PFL_0643: Vitamin B12 ABC transporter, permease component BtuC |
Gene: Pmen_4564: Vitamin B12 ABC transporter, permease component BtuC |
|
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Vitamin B12 ABC transporter, permease component BtuC |
| CRON 2. | |||||||||
| cbtC |
|
|
|
|
|
*
Pseudomonas mendocina ymp Site: position = -258 score = 125.14 sequence = GAGTAAGGTTGCCGC... Gene: Pmen_3752: Predicted cobalt transporter CbtC |
|
|
Predicted cobalt transporter CbtC |
| CRON 3. | |||||||||
| btuB1 |
|
Gene: PSEEN0599: Outer membrane vitamin B12 receptor BtuB |
Gene: PP0525: Outer membrane vitamin B12 receptor BtuB |
|
Gene: PFL_5511: Outer membrane vitamin B12 receptor BtuB |
*
Pseudomonas mendocina ymp Site: position = -290 score = 82.64 sequence = CATTCATGTTCCGCC... Gene: Pmen_3845: Outer membrane vitamin B12 receptor BtuB |
*
Pseudomonas stutzeri A1501 Site: position = -314 score = 98.51 sequence = GCGTTTTCTTATCCG... Gene: PST_0846: Outer membrane vitamin B12 receptor BtuB |
Gene: Avin_07860: Outer membrane vitamin B12 receptor BtuB |
Outer membrane vitamin B12 receptor BtuB |
| CRON 4. | |||||||||
| btuB2 |
|
|
|
|
*
Pseudomonas fluorescens Pf-5 Site: position = -189 score = 126.24 sequence = CATATGCCGCCCAGT... Gene: PFL_2240: Outer membrane vitamin B12 receptor BtuB |
|
|
|
Outer membrane vitamin B12 receptor BtuB |
| cbiW |
|
*
Pseudomonas entomophila L48 Site: position = -297 score = 103.97 sequence = CATGCCGCCCAGTTT... Gene: PSEEN2578: Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis |
|
|
Gene: PFL_2239: Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis |
|
|
|
Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis |
| btuF2 |
|
|
|
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Gene: PFL_2238: Vitamin B12 ABC transporter, B12-binding component BtuF |
|
|
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Vitamin B12 ABC transporter, B12-binding component BtuF |
| CRON 5. | |||||||||
| btuF |
|
|
*
Pseudomonas putida KT2440 Site: position = -226 score = 102.77 sequence = GTCTACCATGCGGGC... Gene: PP2418: Vitamin B12 ABC transporter, B12-binding component BtuF |
*
Pseudomonas syringae pv. tomato str. DC3000 Site: position = -159 score = 123.58 sequence = TTACCATGCCGGCCG... Gene: PSPTO3256: Vitamin B12 ABC transporter, B12-binding component BtuF |
|
|
|
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Vitamin B12 ABC transporter, B12-binding component BtuF |
| btuC |
|
|
Gene: PP2417: Vitamin B12 ABC transporter, permease component BtuC |
Gene: PSPTO3257: Vitamin B12 ABC transporter, permease component BtuC |
|
|
|
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Vitamin B12 ABC transporter, permease component BtuC |
| btuD |
|
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Gene: PP2416: Vitamin B12 ABC transporter, ATPase component BtuD |
Gene: PSPTO3258: Vitamin B12 ABC transporter, ATPase component BtuD |
|
|
|
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Vitamin B12 ABC transporter, ATPase component BtuD |
| CRON 6. | |||||||||
| btuB2 |
*
Pseudomonas aeruginosa PAO1 Site: position = -303 score = 82.28 sequence = CTGCGCGCCTTGCGA... Gene: PA1271: Outer membrane vitamin B12 receptor BtuB |
|
|
|
|
|
*
Pseudomonas stutzeri A1501 Site: position = -373 score = 105.73 sequence = ACCTCCGCGTCGCCT... Gene: PST_1289: Outer membrane vitamin B12 receptor BtuB |
*
Azotobacter vinelandii AvOP Site: position = -310 score = 91.29 sequence = CCCTGCGCGCCTCGC... Gene: Avin_33130: Outer membrane vitamin B12 receptor BtuB / Optional hypothetical component of the B12 transporter BtuM / Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
Outer membrane vitamin B12 receptor BtuB |
| btuM |
|
|
|
|
|
|
Gene: PST_1290: Optional hypothetical component of the B12 transporter BtuM |
|
Optional hypothetical component of the B12 transporter BtuM |
| btuR |
Gene: PA1272: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
*
Pseudomonas entomophila L48 Site: position = -330 score = 96.17 sequence = CTTCGCGGCGTGTTT... Gene: PSEEN1378: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
*
Pseudomonas putida KT2440 Site: position = -340 score = 87.42 sequence = CTTCGCGGCGTGTTT... Gene: PP1672: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
*
Pseudomonas syringae pv. tomato str. DC3000 Site: position = -304 score = 113.92 sequence = CTTCGCGGCTTGTTT... Gene: PSPTO1708: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
*
Pseudomonas fluorescens Pf-5 Site: position = -315 score = 105.58 sequence = ACCTTCGCGACTTGT... Gene: PFL_4431: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
*
Pseudomonas mendocina ymp Site: position = -394 score = 97.27 sequence = CTGCGCGCCTTGCTT... Gene: Pmen_1750: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
Gene: PST_1291: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
|
Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
| cbiA |
Gene: PA1273: Cobyrinic acid A,C-diamide synthase |
Gene: PSEEN1379: Cobyrinic acid A,C-diamide synthase |
Gene: PP1673: Cobyrinic acid A,C-diamide synthase |
Gene: PSPTO1709: Cobyrinic acid A,C-diamide synthase |
Gene: PFL_4430: Cobyrinic acid A,C-diamide synthase |
Gene: Pmen_1751: Cobyrinic acid A,C-diamide synthase |
Gene: PST_1292: Cobyrinic acid A,C-diamide synthase |
Gene: Avin_33120: Cobyrinic acid A,C-diamide synthase |
Cobyrinic acid A,C-diamide synthase |
| bluB |
Gene: PA1274: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
Gene: PSEEN1380: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
Gene: PP1674: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
Gene: PSPTO1710: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
Gene: PFL_4429: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
Gene: Pmen_1752: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
Gene: PST_1293: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
Gene: Avin_33110: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
| btuF |
|
|
|
|
|
|
Gene: PST_1294: Vitamin B12 ABC transporter, B12-binding component BtuF |
|
Vitamin B12 ABC transporter, B12-binding component BtuF |
| cbiB |
Gene: PA1275: Adenosylcobinamide-phosphate synthase |
Gene: PSEEN1381: Adenosylcobinamide-phosphate synthase |
Gene: PP1675: Adenosylcobinamide-phosphate synthase |
Gene: PSPTO1711: Adenosylcobinamide-phosphate synthase |
Gene: PFL_4428: Adenosylcobinamide-phosphate synthase |
Gene: Pmen_1753: Adenosylcobinamide-phosphate synthase |
Gene: PST_1295: Adenosylcobinamide-phosphate synthase |
Gene: Avin_33100: Adenosylcobinamide-phosphate synthase |
Adenosylcobinamide-phosphate synthase |
| cobD |
Gene: PA1276: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) |
Gene: PSEEN1382: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) |
Gene: PP1676: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) |
Gene: PSPTO1712: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) |
Gene: PFL_4427: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) |
Gene: Pmen_1754: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) |
Gene: PST_1296: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) |
Gene: Avin_33090: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) |
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) |
| cbiP |
Gene: PA1277: Cobyric acid synthase |
Gene: PSEEN1383: Cobyric acid synthase |
Gene: PP1677: Cobyric acid synthase |
Gene: PSPTO1713: Cobyric acid synthase |
Gene: PFL_4426: Cobyric acid synthase |
Gene: Pmen_1755: Cobyric acid synthase |
Gene: PST_1297: Cobyric acid synthase |
Gene: Avin_33080: Cobyric acid synthase |
Cobyric acid synthase |
| cobU |
Gene: PA1278: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) |
Gene: PSEEN1384: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) |
Gene: PP1678: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) |
Gene: PSPTO1714: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) |
Gene: PFL_4425: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) |
Gene: Pmen_1756: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) |
Gene: PST_1298: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) |
Gene: Avin_33060: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) |
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) |
| cobT |
Gene: PA1279: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
Gene: PSEEN1385: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
Gene: PP1679: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
Gene: PSPTO1715: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
Gene: PFL_4424: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
Gene: Pmen_1757: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
Gene: PST_1299: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
Gene: Avin_33050: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
| cobC |
Gene: PA1280: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
Gene: PSEEN1386: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
Gene: PP1680: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
Gene: PSPTO1716: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
Gene: PFL_4423: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
Gene: Pmen_1758: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
Gene: PST_1300: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
Gene: Avin_33040: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
| cobS |
Gene: PA1281: Cobalamin synthase |
Gene: PSEEN1387: Cobalamin synthase |
Gene: PP1681: Cobalamin synthase |
Gene: PSPTO1717: Cobalamin synthase |
Gene: PFL_4422: Cobalamin synthase |
Gene: Pmen_1759: Cobalamin synthase |
Gene: PST_1301: Cobalamin synthase |
Gene: Avin_33030: Cobalamin synthase |
Cobalamin synthase |
| Avin_33070 |
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|
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|
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Gene: Avin_33070: hypothetical protein |
hypothetical protein |
| CRON 7. | |||||||||
| cobW |
*
Pseudomonas aeruginosa PAO1 Site: position = -238 score = 104.56 sequence = CGTAGCCTTGCCGGT... Gene: PA2945: CobW GTPase involved in cobalt insertion for B12 biosynthesis |
*
Pseudomonas entomophila L48 Site: position = -299 score = 97.48 sequence = TAGCCTTGCCGCTTC... Gene: PSEEN2432: CobW GTPase involved in cobalt insertion for B12 biosynthesis |
*
Pseudomonas putida KT2440 Site: position = -307 score = 100.75 sequence = CGTAGCCTTGCCACT... Gene: PP3508: CobW GTPase involved in cobalt insertion for B12 biosynthesis |
*
Pseudomonas syringae pv. tomato str. DC3000 Site: position = -339 score = 106.84 sequence = CGTAGCCTTGCCGGT... Gene: PSPTO3150: CobW GTPase involved in cobalt insertion for B12 biosynthesis |
*
Pseudomonas fluorescens Pf-5 Site: position = -98 score = 94.95 sequence = CGTAGCCTTGCGCTT... Gene: PFL_3655: CobW GTPase involved in cobalt insertion for B12 biosynthesis |
*
Pseudomonas mendocina ymp Site: position = -291 score = 113.12 sequence = GTAGCCTTCTCGCTT... Gene: Pmen_4587: CobW GTPase involved in cobalt insertion for B12 biosynthesis |
|
|
CobW GTPase involved in cobalt insertion for B12 biosynthesis |
| cobN |
Gene: PA2944: CobN component of cobalt chelatase involved in B12 biosynthesis |
Gene: PSEEN2433: CobN component of cobalt chelatase involved in B12 biosynthesis |
Gene: PP3507: CobN component of cobalt chelatase involved in B12 biosynthesis |
Gene: PSPTO3149: CobN component of cobalt chelatase involved in B12 biosynthesis |
Gene: PFL_3654: CobN component of cobalt chelatase involved in B12 biosynthesis |
Gene: Pmen_4586: CobN component of cobalt chelatase involved in B12 biosynthesis |
|
|
CobN component of cobalt chelatase involved in B12 biosynthesis |
| chII |
Gene: PA2942: ChlI component of cobalt chelatase involved in B12 biosynthesis |
Gene: PSEEN2434: ChlI component of cobalt chelatase involved in B12 biosynthesis |
Gene: PP3506: ChlI component of cobalt chelatase involved in B12 biosynthesis |
Gene: PSPTO3148: ChlI component of cobalt chelatase involved in B12 biosynthesis |
Gene: PFL_3653: ChlI component of cobalt chelatase involved in B12 biosynthesis |
Gene: Pmen_4585: ChlI component of cobalt chelatase involved in B12 biosynthesis |
|
|
ChlI component of cobalt chelatase involved in B12 biosynthesis |
| chlD |
Gene: PA2941: ChlD component of cobalt chelatase involved in B12 biosynthesis |
Gene: PSEEN2435: ChlD component of cobalt chelatase involved in B12 biosynthesis |
Gene: PP3505: ChlD component of cobalt chelatase involved in B12 biosynthesis |
Gene: PSPTO3147: ChlD component of cobalt chelatase involved in B12 biosynthesis |
Gene: PFL_3652: ChlD component of cobalt chelatase involved in B12 biosynthesis |
Gene: Pmen_4584: ChlD component of cobalt chelatase involved in B12 biosynthesis |
|
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ChlD component of cobalt chelatase involved in B12 biosynthesis |
| cbiL |
|
Gene: PSEEN3208: Precorrin-6A synthase (EC 2.1.1.152) |
Gene: PP3763: Precorrin-6A synthase (EC 2.1.1.152) |
Gene: PSPTO2709: Precorrin-6A synthase (EC 2.1.1.152) |
Gene: PFL_2249: Precorrin-6A synthase (EC 2.1.1.152) |
Gene: Pmen_4583: Precorrin-6A synthase (EC 2.1.1.152) |
|
|
Precorrin-6A synthase (EC 2.1.1.152) |
| CRON 8. | |||||||||
| cobG |
*
Pseudomonas aeruginosa PAO1 Site: position = -252 score = 87.78 sequence = GCATAATAGCGCGTT... Gene: PA2906: Cobalamin biosynthesis protein CobG |
Gene: PSEEN4871: Cobalamin biosynthesis protein CobG |
Gene: PP4829: Cobalamin biosynthesis protein CobG |
Gene: PSPTO4877: Cobalamin biosynthesis protein CobG |
Gene: PFL_0657: Cobalamin biosynthesis protein CobG |
*
Pseudomonas mendocina ymp Site: position = -184 score = 99.84 sequence = GCCTTCGCGGGAGTG... Gene: Pmen_4571: Cobalamin biosynthesis protein CobG |
|
|
Cobalamin biosynthesis protein CobG |
| cbiC |
Gene: PA2905: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) |
Gene: PSEEN4870: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) |
Gene: PP4828: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) |
Gene: PSPTO4876: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) |
Gene: PFL_0658: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) |
Gene: Pmen_4572: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) |
|
|
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) |
| cbiL |
Gene: PA2904: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) |
Gene: PSEEN4869: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) |
Gene: PP4827: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) |
Gene: PSPTO4875: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) |
Gene: PFL_0659: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) |
Gene: Pmen_4573: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) |
|
|
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) |
| cbiGH |
Gene: PA2903: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase |
Gene: PSEEN4868: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase |
Gene: PP4826: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase |
Gene: PSPTO4874: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase |
Gene: PFL_0660: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase |
Gene: Pmen_4574: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase |
|
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Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase |
| CRON 9. | |||||||||
| cbtB |
|
*
Pseudomonas entomophila L48 Site: position = -333 score = 102.94 sequence = TGCTAGCGCATTGCG... Gene: PSEEN2431: hypothetical protein |
|
*
Pseudomonas syringae pv. tomato str. DC3000 Site: position = -309 score = 110.34 sequence = CTGTGCACCTTGTTT... Gene: PSPTO3151: hypothetical protein |
*
Pseudomonas fluorescens Pf-5 Site: position = -156 score = 105.34 sequence = CTACACACCTTGTTA... Gene: PFL_3656: hypothetical protein |
|
|
|
hypothetical protein |
| cbtA |
*
Pseudomonas aeruginosa PAO1 Site: position = -58 score = 77.81 sequence = CTAGGCGGGTTGTCC... Gene: PA2946: Predicted cobalt transporter CbtA |
Gene: PSEEN2429: Predicted cobalt transporter CbtA |
|
Gene: PSPTO3152: Predicted cobalt transporter CbtA |
Gene: PFL_3657: Predicted cobalt transporter CbtA |
|
|
|
Predicted cobalt transporter CbtA |
| cobE |
Gene: PA2947: Cobalamin biosynthesis protein CobE |
Gene: PSEEN2428: Cobalamin biosynthesis protein CobE |
Gene: PP3409: Cobalamin biosynthesis protein CobE |
|
Gene: PFL_3658: Cobalamin biosynthesis protein CobE |
Gene: Pmen_4588: Cobalamin biosynthesis protein CobE |
|
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Cobalamin biosynthesis protein CobE |
| cbiF |
Gene: PA2948: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) |
Gene: PSEEN2427: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) |
Gene: PP3410: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) |
Gene: PSPTO3154: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) |
Gene: PFL_3659: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) |
Gene: Pmen_4589: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) |
|
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Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |