Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Cobalamin in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Regulog: Cobalamin - Pseudomonadaceae
Under regulation:
- Genes 19
- Operons 4
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -159
Score: 123.6
Sequence: TTACCATGCCGGCCG...
Locus tag: PSPTO3256
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: PSPTO3257
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: PSPTO3258
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
PSPTO3256
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
PSPTO3257
btuC
Vitamin B12 ABC transporter, permease component BtuC
PSPTO3258
btuD
Vitamin B12 ABC transporter, ATPase component BtuD
Position: -304
Score: 113.9
Sequence: CTTCGCGGCTTGTTT...
Locus tag: PSPTO1708
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: PSPTO1709
Name: cbiA
Funciton: Cobyrinic acid A,C-diamide synthase
Locus tag: PSPTO1710
Name: bluB
Funciton: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
Locus tag: PSPTO1711
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: PSPTO1712
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: PSPTO1713
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: PSPTO1714
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: PSPTO1715
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: PSPTO1716
Name: cobC
Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
Locus tag: PSPTO1717
Name: cobS
Funciton: Cobalamin synthase
PSPTO1708
btuR
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
PSPTO1709
cbiA
Cobyrinic acid A,C-diamide synthase
PSPTO1710
bluB
Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
PSPTO1711
cbiB
Adenosylcobinamide-phosphate synthase
PSPTO1712
cobD
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
PSPTO1713
cbiP
Cobyric acid synthase
PSPTO1714
cobU
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
PSPTO1715
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
PSPTO1716
cobC
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
PSPTO1717
cobS
Cobalamin synthase
Position: -309
Score: 110.3
Sequence: CTGTGCACCTTGTTT...
Locus tag: PSPTO3151
Name: cbtB
Funciton: hypothetical protein
Locus tag: PSPTO3152
Name: cbtA
Funciton: Predicted cobalt transporter CbtA
PSPTO3151
cbtB
hypothetical protein
PSPTO3152
cbtA
Predicted cobalt transporter CbtA
Position: -339
Score: 106.8
Sequence: CGTAGCCTTGCCGGT...
Locus tag: PSPTO3150
Name: null
Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: PSPTO3149
Name: null
Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: PSPTO3148
Name: chII
Funciton: ChlI component of cobalt chelatase involved in B12 biosynthesis
Locus tag: PSPTO3147
Name: chlD
Funciton: ChlD component of cobalt chelatase involved in B12 biosynthesis
PSPTO3150
CobW GTPase involved in cobalt insertion for B12 biosynthesis
PSPTO3149
CobN component of cobalt chelatase involved in B12 biosynthesis
PSPTO3148
chII
ChlI component of cobalt chelatase involved in B12 biosynthesis
PSPTO3147
chlD
ChlD component of cobalt chelatase involved in B12 biosynthesis
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