Regulog FnrN/FixK/AadR - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Oxidative stress response; Nitrogen fixation |
| Effector: | Oxygen |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - FnrN/FixK
- By TF family - CRP
- By effector - Oxygen
- By pathway - Oxidative stress response
- By pathway - Nitrogen fixation
| Genome | Genes | Operons |
|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | 51 | 16 |
| Azorhizobium caulinodans ORS 571 | 18 | 5 |
| Bartonella quintana str. Toulouse | ||
| Bradyrhizobium japonicum USDA 110 | 33 | 21 |
| Bradyrhizobium sp. BTAi1 | 44 | 20 |
| Brucella melitensis 16M | 13 | 6 |
| Mesorhizobium loti MAFF303099 | 18 | 6 |
| Mesorhizobium sp. BNC1 | 28 | 7 |
| Nitrobacter winogradskyi Nb-255 | 8 | 3 |
| Rhizobium etli CFN 42 | 37 | 13 |
| Rhizobium leguminosarum bv. viciae 3841 | 33 | 14 |
| Rhizobium sp. NGR234 | 29 | 11 |
| Rhodopseudomonas palustris CGA009 | 74 | 28 |
| Sinorhizobium meliloti 1021 | 33 | 10 |
| Xanthobacter autotrophicus Py2 | 14 | 5 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| ccoN |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -131 score = 5.53442 sequence = TTCTTGATCTGGATCAAGGT Gene: Atu1537: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
*
Azorhizobium caulinodans ORS 571 Site: position = -93 score = 4.99923 sequence = CCTTTGACTTGTATCAAGGT Gene: AZC_4523: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -73 score = 4.78798 sequence = ATCTTGATTTCAATCAATTC Gene: blr2763: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
*
Bradyrhizobium sp. BTAi1 Site: position = -100 score = 5.15966 sequence = AACTTGATTTCGATCAATTC Gene: BBta_2792: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
*
Brucella melitensis 16M Site: position = -108 score = 5.50733 sequence = TGTTTGATTTAGATCAATGA Gene: BMEI1564: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
*2
Mesorhizobium loti MAFF303099 Site: position = -96 score = 5.53145 sequence = GCTTTGACCTGGATCAAGGC Gene: mll6630: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) Gene: mlr6411: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
*
Mesorhizobium sp. BNC1 Site: position = -90 score = 5.14974 sequence = GATTTGATCCAGAGCAAAGT Gene: Meso_2250: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
|
*2
Rhizobium etli CFN 42 Site: position = -105 score = 5.21759 sequence = TTGTTGATGTAGATCAAGGA Gene: RHE_PD00296: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) Site: position = -373 score = 5.21759 sequence = TTGTTGATGTAGATCAAGGA Gene: RHE_PF00507: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
*3
Rhizobium leguminosarum bv. viciae 3841 Site: position = -96 score = 5.21759 sequence = TTGTTGATGTAGATCAAGGA Gene: pRL90018: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) Site: position = -96 score = 5.21151 sequence = TCGTTGACGCAGATCAAGGC Gene: pRL100205: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) Gene: RL0536: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
*2
Rhizobium sp. NGR234 Site: position = -115 score = 5.53987 sequence = ACCTTGATCTGAATCAAGGC Gene: NGR_c17990: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) Gene: NGR_c25810: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
*
Rhodopseudomonas palustris CGA009 Site: position = -79 score = 5.0962 sequence = ATTTTGATTTCGATCAAACG Gene: RPA0019: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
*3
Sinorhizobium meliloti 1021 Gene: SMa0765: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) Gene: SMa0612: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) Site: position = -109 score = 5.72143 sequence = CACTTGATCTGGATCAAGGT Gene: SMa1220: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
*
Xanthobacter autotrophicus Py2 Site: position = -97 score = 5.16175 sequence = GCTTTGACCTGTATCAAGGA Gene: Xaut_0459: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) |
| ccoO |
Gene: Atu1536: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
Gene: AZC_4524: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
|
Gene: blr2764: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
Gene: BBta_2793: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
Gene: BMEI1565: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
2
Mesorhizobium loti MAFF303099 Gene: mll6629: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) Gene: mlr6412: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
Gene: Meso_2251: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
|
2
Rhizobium etli CFN 42 Gene: RHE_PD00295: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) Gene: RHE_PF00506: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
3
Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90017: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) Gene: pRL100206: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) Gene: RL0535: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
2
Rhizobium sp. NGR234 Gene: NGR_c25800: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) Gene: NGR_c17980: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
Gene: RPA0018: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
3
Sinorhizobium meliloti 1021 Gene: SMa0615: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) Gene: SMa0766: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) Gene: SMa1216: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
Gene: Xaut_0460: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) |
| ccoQ |
Gene: Atu1535: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
Gene: AZC_4525: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
|
Gene: bsr2765: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
|
|
2
Mesorhizobium loti MAFF303099 Gene: msl6627: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) Gene: msr6413: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
Gene: Meso_2252: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
|
2
Rhizobium etli CFN 42 Gene: RHE_PD00294: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) Gene: RHE_PF00505: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
3
Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90016A: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) Gene: RL0533A: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) Gene: pRL100206A: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
Gene: NGR_c25790: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
Gene: RPA0017: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
3
Sinorhizobium meliloti 1021 Gene: SMa1214: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) Gene: SMa0767: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) Gene: SMa0616: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
Gene: Xaut_0461: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) |
| ccoP |
Gene: Atu1534: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
Gene: AZC_4526: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
|
Gene: blr2766: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
Gene: BBta_2794: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
Gene: BMEI1566: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
2
Mesorhizobium loti MAFF303099 Gene: mll6628: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) Gene: mlr6414: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
Gene: Meso_2253: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
|
2
Rhizobium etli CFN 42 Gene: RHE_PF00504: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) Gene: RHE_PD00293: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
3
Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90016: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) Gene: RL0534: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) Gene: pRL100207: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
2
Rhizobium sp. NGR234 Gene: NGR_c25780: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) Gene: NGR_c17970: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
Gene: RPA0016: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
3
Sinorhizobium meliloti 1021 Gene: SMa1213: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) Gene: SMa0769: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) Gene: SMa0617: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
Gene: Xaut_0462: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) |
| ccoG |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -72 score = 5.19607 sequence = CACTTGATGTAAGTCAAGGA Gene: Atu1530: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
Gene: AZC_4527: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -74 score = 5.25511 sequence = CGTTTGAGCTGGATCAACGG Gene: blr2767: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
*
Bradyrhizobium sp. BTAi1 Site: position = -86 score = 5.109 sequence = CAATTGAGCTGGATCAACTG Gene: BBta_2795: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
Gene: BMEI1567: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
*2
Mesorhizobium loti MAFF303099 Site: position = -129 score = 5.1199 sequence = GGATTGACCTGCATCAACGC Gene: mll6626: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation Site: position = -145 score = 4.80645 sequence = CGATTGACCTGCAGCAAGGC Gene: mlr6415: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
|
|
*2
Rhizobium etli CFN 42 Site: position = -69 score = 5.32776 sequence = TTCTTGATCTGCATCAAGGA Site: position = -209 score = 5.16368 sequence = AGTTTGATCTGCCTCAAAGA Gene: RHE_PD00292: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation Site: position = -70 score = 5.32776 sequence = TTCTTGATCTGCATCAAGGA Gene: RHE_PF00503: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
*2
Rhizobium leguminosarum bv. viciae 3841 Site: position = -241 score = 4.75942 sequence = AGTTTGACCGGTGTCAAGGA Site: position = -69 score = 5.32776 sequence = TTCTTGATCTGCATCAAGGA Gene: pRL90015: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation Site: position = -69 score = 5.34136 sequence = CTCTTGATCTGCATCAAGGA Site: position = -218 score = 4.99856 sequence = AGTTTGACCTGCCTCAAAGA Gene: pRL100208: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
*
Rhizobium sp. NGR234 Site: position = -79 score = 5.3209 sequence = GACTTGACGCAGATCAAGGT Gene: NGR_c17930: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
Gene: RPA0015: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
*
Sinorhizobium meliloti 1021 Site: position = -82 score = 5.3209 sequence = GACTTGACGCAGATCAAGGT Gene: SMa1211: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
Gene: Xaut_0463: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation |
| ccoH |
Gene: Atu1529: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
Gene: AZC_4528: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
|
Gene: blr2768: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
Gene: BBta_2796: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
Gene: BMEI1568: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
2
Mesorhizobium loti MAFF303099 Gene: mll6625: Type cbb3 cytochrome oxidase biogenesis protein CcoH Gene: mlr6416: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
|
|
2
Rhizobium etli CFN 42 Gene: RHE_PF00502: Type cbb3 cytochrome oxidase biogenesis protein CcoH Gene: RHE_PD00291: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
2
Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90014: Type cbb3 cytochrome oxidase biogenesis protein CcoH Gene: pRL100209: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
Gene: NGR_c17920: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
Gene: RPA0014: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
Gene: SMa1210: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
Gene: Xaut_0464: Type cbb3 cytochrome oxidase biogenesis protein CcoH |
Type cbb3 cytochrome oxidase biogenesis protein CcoH |
| ccoI |
Gene: Atu1528: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: AZC_4529: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
|
Gene: blr2769: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: BBta_2797: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: BMEI1569: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
2
Mesorhizobium loti MAFF303099 Gene: mll6624: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) Gene: mlr6417: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Meso_2255: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
|
2
Rhizobium etli CFN 42 Gene: RHE_PF00501: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) Gene: RHE_PD00290: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
3
Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90013: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) Gene: RL0532: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) Gene: pRL100210: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
2
Rhizobium sp. NGR234 Gene: NGR_c25750: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) Gene: NGR_c17910: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: RPA0013: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
2
Sinorhizobium meliloti 1021 Gene: SMa0621: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) Gene: SMa1209: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Xaut_0465: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) |
| ccoS |
Gene: Atu1527: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
Gene: AZC_4530: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
|
Gene: bsr2770: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
Gene: BBta_2798: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
|
2
Mesorhizobium loti MAFF303099 Gene: msr6418: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion Gene: msl6623: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
Gene: Meso_2256: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
|
2
Rhizobium etli CFN 42 Gene: RHE_PF00500: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion Gene: RHE_PD00289: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
2
Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100210A: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion Gene: pRL90012A: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
2
Rhizobium sp. NGR234 Gene: NGR_c25740: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion Gene: NGR_c17900: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
Gene: RPA0012: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
2
Sinorhizobium meliloti 1021 Gene: SMa0622: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion Gene: SMa1208: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
Gene: Xaut_0466: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
| PF00083 |
|
Gene: AZC_4531: Predicted transporter, MFS family |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: Xaut_0467: Predicted transporter, MFS family |
Predicted transporter, MFS family |
| COG5473 |
|
|
|
|
|
|
|
Gene: Meso_2254: Predicted integral membrane protein |
|
|
Gene: RL0533: Predicted integral membrane protein |
Gene: NGR_c25760: Predicted integral membrane protein |
|
Gene: SMa0620: Predicted integral membrane protein |
|
Predicted integral membrane protein |
| pRL100211 |
|
|
|
|
|
|
|
|
|
2
Rhizobium etli CFN 42 Gene: RHE_PF00499: transcriptional regulator, Crp/Fnr family Gene: RHE_PD00288: transcriptional regulator, Crp/Fnr family |
2
Rhizobium leguminosarum bv. viciae 3841 Gene: pRL100211: transcriptional regulator, Crp/Fnr family Gene: pRL90012: transcriptional regulator, Crp/Fnr family |
|
|
|
|
transcriptional regulator, Crp/Fnr family |
| CRON 2. | ||||||||||||||||
| paz |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -93 score = 4.03148 sequence = CATTTGATTTTTCGCAAAGA Gene: Atu2283: pseudoazurin |
|
|
|
|
|
|
|
|
|
|
*
Rhizobium sp. NGR234 Site: position = -92 score = 4.74314 sequence = TGTTTGACAGACATCAAAGA Gene: NGR_c09980: pseudoazurin |
|
*
Sinorhizobium meliloti 1021 Site: position = -92 score = 4.65215 sequence = TATTTGACAAGCATCAAAGA Gene: SMa1243: pseudoazurin |
|
pseudoazurin |
| CRON 3. | ||||||||||||||||
| nirK |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -96 score = 4.27494 sequence = AGTTTGTTCCATCTCAAATT Gene: Atu4382: Copper-containing nitrite reductase (EC 1.7.2.1) |
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -77 score = 4.02179 sequence = AGCTTGTTGCAGCGCAAACA Gene: blr7089: Copper-containing nitrite reductase (EC 1.7.2.1) |
*
Bradyrhizobium sp. BTAi1 Site: position = -84 score = 3.86077 sequence = TGCTTGTTGCAGCACAAACA Gene: BBta_6826: Copper-containing nitrite reductase (EC 1.7.2.1) |
*
Brucella melitensis 16M Site: position = -188 score = 3.70133 sequence = CCTTTGTCTTAACGCAAACA Site: position = -95 score = 4.63208 sequence = ATATTGATTGCGGTCAAGGA Gene: BMEII0988: Copper-containing nitrite reductase (EC 1.7.2.1) |
|
*3
Mesorhizobium sp. BNC1 Site: position = -176 score = 4.73703 sequence = ACTTTGATCCAGCGCAACGT Site: position = -83 score = 4.31592 sequence = TATTTGCGCCAGAGCAAAGA Gene: Meso_2243: Copper-containing nitrite reductase (EC 1.7.2.1) Site: position = -87 score = 4.0274 sequence = CGTTTGCGCCAGCGCAAAGA Gene: Meso_4273: Copper-containing nitrite reductase (EC 1.7.2.1) Gene: Meso_4422: Copper-containing nitrite reductase (EC 1.7.2.1) |
Gene: Nwi_2648: Copper-containing nitrite reductase (EC 1.7.2.1) |
*
Rhizobium etli CFN 42 Site: position = -118 score = 3.65757 sequence = ACTTTGTGCCGGCACAAACA Site: position = -95 score = 4.498 sequence = AGTTTGCGCCACGTCAAAGA Gene: RHE_PF00525: Copper-containing nitrite reductase (EC 1.7.2.1) |
|
*2
Rhizobium sp. NGR234 Site: position = -196 score = 3.63829 sequence = TCTTTGACAATTGGCAAAGA Site: position = -92 score = 4.45581 sequence = TATTTGTTCCACCTCAAAGA Gene: NGR_c09950: Copper-containing nitrite reductase (EC 1.7.2.1) Gene: NGR_b14380: Copper-containing nitrite reductase (EC 1.7.2.1) |
*2
Rhodopseudomonas palustris CGA009 Site: position = -85 score = 3.90231 sequence = AGCTTGTGCTGGGACAAACA Gene: RPA4145: Copper-containing nitrite reductase (EC 1.7.2.1) Gene: RPA3306: Copper-containing nitrite reductase (EC 1.7.2.1) |
*
Sinorhizobium meliloti 1021 Site: position = -192 score = 3.63829 sequence = TCTTTGACAATTGGCAAAGA Site: position = -91 score = 4.5021 sequence = TGTTTGTTCCACCTCAAAGA Gene: SMa1250: Copper-containing nitrite reductase (EC 1.7.2.1) |
Gene: Xaut_3971: Copper-containing nitrite reductase (EC 1.7.2.1) |
Copper-containing nitrite reductase (EC 1.7.2.1) |
| nirV |
Gene: Atu4381: Nitrite reductase accessory protein NirV |
|
|
Gene: blr7090: Nitrite reductase accessory protein NirV |
Gene: BBta_6827: Nitrite reductase accessory protein NirV |
Gene: BMEII0987: Nitrite reductase accessory protein NirV |
|
Gene: Meso_4272: Nitrite reductase accessory protein NirV |
|
Gene: RHE_PF00526: Nitrite reductase accessory protein NirV |
|
Gene: NGR_c09960: Nitrite reductase accessory protein NirV |
Gene: RPA4146: Nitrite reductase accessory protein NirV |
Gene: SMa1247: Nitrite reductase accessory protein NirV |
|
Nitrite reductase accessory protein NirV |
| nnrR |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -129 score = 4.26673 sequence = TAGTTGATTCATATCATTTG Gene: Atu4380: Nitric oxide stress response transcriptional regulator NnrR, Crp family |
|
|
|
|
Gene: BMEII0986: Nitric oxide stress response transcriptional regulator NnrR, Crp family |
|
|
|
Gene: RHE_PF00527: Nitric oxide stress response transcriptional regulator NnrR, Crp family |
|
Gene: NGR_c09970: Nitric oxide stress response transcriptional regulator NnrR, Crp family |
|
Gene: SMa1245: Nitric oxide stress response transcriptional regulator NnrR, Crp family |
|
Nitric oxide stress response transcriptional regulator NnrR, Crp family |
| nnrU |
Gene: Atu4392: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) |
|
|
|
|
|
|
|
|
Gene: RHE_PF00528: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) |
|
Gene: NGR_c09820: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) |
Gene: RPA1485: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) |
Gene: SMa1283: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) |
|
NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) |
| Atu8040 |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -68 score = 4.28521 sequence = TCTTTGCGGTCGGTCAAAGA Gene: Atu8040: Conserved hypothetical protein |
|
|
|
Gene: BBta_2085: Conserved hypothetical protein |
|
|
|
|
|
|
*
Rhizobium sp. NGR234 Site: position = -64 score = 4.65348 sequence = TCTTTGCGCTTGATCAAAGA Gene: NGR_c09830: Conserved hypothetical protein |
Gene: RPA1452: Conserved hypothetical protein |
|
|
Conserved hypothetical protein |
| CRON 4. | ||||||||||||||||
| sinR |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -174 score = 5.18302 sequence = TGTTTGATCGAAATCAATTC Gene: Atu2394: Biofilm formation transcriptional regulator SinR, Crp Family |
|
|
|
|
|
|
|
|
|
*
Rhizobium leguminosarum bv. viciae 3841 Site: position = -96 score = 4.89876 sequence = CCGTTGACCAAAATCAATTC Gene: RL3726: Biofilm formation transcriptional regulator SinR, Crp Family |
|
|
|
|
Biofilm formation transcriptional regulator SinR, Crp Family |
| CRON 5. | ||||||||||||||||
| fixKf |
|
|
|
|
|
|
|
|
|
*
Rhizobium etli CFN 42 Site: position = -152 score = 5.21759 sequence = TCCTTGATCTACATCAACAA Gene: RHE_PF00508: Nitrogen fixation and oxygen response transcriptional regulator FixKf, Crp family |
*3
Rhizobium leguminosarum bv. viciae 3841 Site: position = -121 score = 5.21759 sequence = TCCTTGATCTACATCAACAA Gene: pRL90019: Nitrogen fixation and oxygen response transcriptional regulator FixKf, Crp family Gene: RL1880: Nitrogen fixation and oxygen response transcriptional regulator FixKf, Crp family Gene: pRL90025: Nitrogen fixation and oxygen response transcriptional regulator FixKf, Crp family |
|
|
Gene: SMa1141: Nitrogen fixation and oxygen response transcriptional regulator FixKf, Crp family |
|
Nitrogen fixation and oxygen response transcriptional regulator FixKf, Crp family |
| fixLf |
|
|
|
|
|
|
|
|
|
Gene: RHE_PF00509: Two-component oxygen-sensor histidine kinase FixLf |
2
Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90020: Two-component oxygen-sensor histidine kinase FixLf Gene: RL1879: Two-component oxygen-sensor histidine kinase FixLf |
|
|
Gene: SMa1142: Two-component oxygen-sensor histidine kinase FixLf |
|
Two-component oxygen-sensor histidine kinase FixLf |
| CRON 6. | ||||||||||||||||
| fnrN |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -208 score = 3.99822 sequence = TATTTGCCTTTTATCAAGAA Site: position = -144 score = 4.8988 sequence = ACTTTGACTTCAATCAAATT Gene: Atu1602: Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family |
|
|
|
|
*
Brucella melitensis 16M Site: position = 19 score = 4.23 sequence = CATTAGATCAGAATCAAAAG Gene: BMEI1294: Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family |
*2
Mesorhizobium loti MAFF303099 Site: position = -103 score = 5.12119 sequence = GCCTTGATTTCGGTCAAAGC Gene: mll6632: Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family Site: position = -102 score = 3.76169 sequence = GCCCTGATTTCGGTCAGCCT Gene: mlr6409: Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family |
|
Gene: Nwi_2061: Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family |
*2
Rhizobium etli CFN 42 Site: position = -110 score = 5.47068 sequence = TCTTTGATCTGAATCAAATT Site: position = -79 score = 4.6197 sequence = CATTTGATAATCATCAAACT Gene: RHE_CH02479: Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family Site: position = -145 score = 5.57917 sequence = GATTTGATCTGGATCAAATC Site: position = -113 score = 4.55795 sequence = AAATTGATAGCCATCAAAGA Gene: RHE_PD00216: Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family |
*
Rhizobium leguminosarum bv. viciae 3841 Site: position = -135 score = 5.73779 sequence = GCTTTGATCTAGATCAAACA Site: position = -103 score = 4.23989 sequence = AAATTGATAATCCTCAAGCG Gene: RL2818: Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family |
*
Rhizobium sp. NGR234 Site: position = -162 score = 5.4761 sequence = TTTTTGATCTGGATCAAGTG Site: position = -123 score = 3.74417 sequence = AAATTGACATTCGTCAGTTC Gene: NGR_c18100: Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family |
|
|
|
Nitrogen fixation and oxygen response transcriptional regulator FnrN, Crp family |
| CRON 7. | ||||||||||||||||
| COG3181 |
|
Gene: AZC_3350: Conserved hypothetical protein |
|
|
|
|
|
|
|
|
Gene: pRL120278: Conserved hypothetical protein |
|
*
Rhodopseudomonas palustris CGA009 Site: position = 3 score = 4.00494 sequence = AGCTTGATCCGACGCATTGT Gene: RPA4694: Conserved hypothetical protein |
|
|
Conserved hypothetical protein |
| ligR |
|
|
|
|
Gene: BBta_2695: Transcriptional regulator LigR, LysR family |
|
|
|
|
|
|
|
Gene: RPA4695: Transcriptional regulator LigR, LysR family |
|
|
Transcriptional regulator LigR, LysR family |
| CRON 8. | ||||||||||||||||
| cbbF |
|
Gene: AZC_1811: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) |
|
Gene: blr2581: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) |
2
Bradyrhizobium sp. BTAi1 Gene: BBta_0445: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Gene: BBta_6401: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) |
Gene: BMEII0422: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) |
|
|
Gene: Nwi_2694: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) |
|
|
Gene: NGR_c06580: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) |
*
Rhodopseudomonas palustris CGA009 Site: position = -221 score = 4.02199 sequence = CTTCTGATCTAAATCACGGC Gene: RPA4645: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) |
Gene: SMb20202: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) |
2
Xanthobacter autotrophicus Py2 Gene: Xaut_3528: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Gene: Xaut_1915: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) |
Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) |
| cbbP |
|
|
|
Gene: blr2582: Phosphoribulokinase (EC 2.7.1.19) |
2
Bradyrhizobium sp. BTAi1 Gene: BBta_0446: Phosphoribulokinase (EC 2.7.1.19) Gene: BBta_6400: Phosphoribulokinase (EC 2.7.1.19) |
|
|
|
Gene: Nwi_2693: Phosphoribulokinase (EC 2.7.1.19) |
Gene: RHE_CH01580: Phosphoribulokinase (EC 2.7.1.19) |
|
|
Gene: RPA4644: Phosphoribulokinase (EC 2.7.1.19) |
Gene: SMb20201: Phosphoribulokinase (EC 2.7.1.19) |
Gene: Xaut_1914: Phosphoribulokinase (EC 2.7.1.19) |
Phosphoribulokinase (EC 2.7.1.19) |
| cbbT |
|
|
|
Gene: blr2583: Transketolase (EC 2.2.1.1) |
Gene: BBta_6399: Transketolase (EC 2.2.1.1) |
|
|
|
|
|
|
|
Gene: RPA4643: Transketolase (EC 2.2.1.1) |
|
|
Transketolase (EC 2.2.1.1) |
| cbbA |
|
|
|
Gene: blr2584: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
2
Bradyrhizobium sp. BTAi1 Gene: BBta_6398: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Gene: BBta_0450: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: BMEII0423: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
|
|
Gene: Nwi_2692: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
|
|
Gene: NGR_c06590: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
Gene: RPA4642: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
|
|
Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
| cbbM |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA4641: Ribulose bisphosphate carboxylase (EC 4.1.1.39) |
|
|
Ribulose bisphosphate carboxylase (EC 4.1.1.39) |
| CRON 9. | ||||||||||||||||
| bll2758 |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -50 score = 4.96349 sequence = CGATTGAGCCAAGTCAAGGC Site: position = -3 score = 4.02689 sequence = AGCATGATCGAGGTCAGTTC Gene: bll2758: Predicted transcriptional regulator, two-component, OmpR family |
*
Bradyrhizobium sp. BTAi1 Site: position = -84 score = 5.36889 sequence = GGATTGAGCTAGATCAAGCG Gene: BBta_2787: Predicted transcriptional regulator, two-component, OmpR family |
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -92 score = 4.83332 sequence = GGATTGAGACAGATCAATCC Gene: RPA4249: Predicted transcriptional regulator, two-component, OmpR family |
|
|
Predicted transcriptional regulator, two-component, OmpR family |
| CRON 10. | ||||||||||||||||
| pufB |
|
|
|
|
Gene: BBta_6433: Light-harvesting LHI, beta subunit |
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -451 score = 4.61553 sequence = GATTTGAGCTAGAACAATGC Gene: RPA1525: Light-harvesting LHI, beta subunit |
|
|
Light-harvesting LHI, beta subunit |
| pufA |
|
|
|
|
Gene: BBta_6432: Light-harvesting LHI, alpha subunit |
|
|
|
|
|
|
|
Gene: RPA1526: Light-harvesting LHI, alpha subunit |
|
|
Light-harvesting LHI, alpha subunit |
| CRON 11. | ||||||||||||||||
| phyB1 |
|
|
|
|
|
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -119 score = 4.22309 sequence = CTCTTGATCTTGCGCAAAAC Gene: RPA3015: Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-); Cyanobacterial phytochrome B |
|
|
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-); Cyanobacterial phytochrome B |
| phyB2 |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA3016: Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-); Cyanobacterial phytochrome B |
|
|
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-); Cyanobacterial phytochrome B |
| rphyB |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA3017: Two-component system response regulator |
|
|
Two-component system response regulator |
| COG0642 |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA3018: Hypothetical protein |
|
|
Hypothetical protein |
| CRON 12. | ||||||||||||||||
| iorA |
|
|
|
|
|
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -100 score = 4.37596 sequence = CCGTTGACTTAGCGCAAATA Site: position = -173 score = 4.0173 sequence = GAATTGACTCAGCACAAAAG Gene: RPA1224: Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) |
|
|
Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) |
| iorB |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA1225: Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8) / Ferredoxin |
|
|
Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8) / Ferredoxin |
| korA |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA1226: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
|
|
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
| korB |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA1227: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
|
|
2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
| korC |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA1228: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
|
|
2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
| paaK |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA1229: Phenylacetate-coenzyme A ligase (EC 6.2.1.30) |
|
|
Phenylacetate-coenzyme A ligase (EC 6.2.1.30) |
| CRON 13. | ||||||||||||||||
| osmY |
|
|
|
|
|
|
|
*
Mesorhizobium sp. BNC1 Site: position = -131 score = 4.67847 sequence = GCTTTGATGAGCATCAACAT Site: position = -94 score = 4.78131 sequence = GCGTTGACGCCGATCAACGC Gene: Meso_2264: Osmotically inducible protein Y precursor |
|
*
Rhizobium etli CFN 42 Site: position = -75 score = 5.18061 sequence = TGCTTGATGAAGATCAACGA Gene: RHE_PD00022: Osmotically inducible protein Y precursor |
*
Rhizobium leguminosarum bv. viciae 3841 Site: position = -75 score = 5.18061 sequence = TGCTTGATGAAGATCAACGA Gene: RL1878: Osmotically inducible protein Y precursor |
|
|
|
|
Osmotically inducible protein Y precursor |
| adhA |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -93 score = 4.12591 sequence = GATTTGCGATGGGTCAATTC Gene: Atu0626: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
*
Azorhizobium caulinodans ORS 571 Site: position = -175 score = 5.32924 sequence = GCGTTGATCCGCATCAAGCA Site: position = -67 score = 5.50976 sequence = AGCTTGATGCGGATCAAGGT Gene: AZC_0320: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -72 score = 4.90777 sequence = GGTTTGACTCCAATCAAGGG Gene: bll5655: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
*
Bradyrhizobium sp. BTAi1 Site: position = -70 score = 4.63902 sequence = CTTTTGATACCGATCAAGAC Gene: BBta_5308: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
*2
Brucella melitensis 16M Site: position = -85 score = 4.59247 sequence = CTCTTGACGGAAATCAACGC Gene: BMEI0925: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing Site: position = -145 score = 4.16217 sequence = GCATTGCGTCTAATCAAGGA Gene: BMEI1746: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
|
Gene: Meso_2263: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
|
*2
Rhizobium etli CFN 42 Site: position = -147 score = 4.15002 sequence = GCTTTGGCCGGCGTCAAGCT Gene: RHE_PC00106: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing Gene: RHE_PC00105: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
*2
Rhizobium leguminosarum bv. viciae 3841 Site: position = -79 score = 4.1907 sequence = GCTTTGCGATGAATCAATGC Gene: pRL90027: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing Site: position = -65 score = 5.24175 sequence = TGTTTGACCGGGATCAAGTC Gene: RL1876: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
*3
Rhizobium sp. NGR234 Gene: NGR_c26770: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing Site: position = -21 score = 4.96776 sequence = ATCTTGATGGAGGTCAAGGG Gene: NGR_c03790: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing Gene: NGR_b11340: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
|
*
Sinorhizobium meliloti 1021 Site: position = -126 score = 4.90575 sequence = TCTTTGATGCCCGTCAAGGA Gene: SMa1296: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
|
Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
| CRON 14. | ||||||||||||||||
| hemA |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -166 score = 4.99429 sequence = TTTTTGATGTGAATCAATTT Gene: Atu2613: 5-aminolevulinate synthase (EC 2.3.1.37) |
*
Azorhizobium caulinodans ORS 571 Site: position = -84 score = 4.67057 sequence = CACTTGATCGAGCGCAAGGG Gene: AZC_0334: 5-aminolevulinate synthase (EC 2.3.1.37) |
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -150 score = 5.43171 sequence = TCTTTGATCGGGATCAAGTT Gene: bll1200: 5-aminolevulinate synthase (EC 2.3.1.37) |
2
Bradyrhizobium sp. BTAi1 Gene: BBta_6405: 5-aminolevulinate synthase (EC 2.3.1.37) Gene: BBta_0861: 5-aminolevulinate synthase (EC 2.3.1.37) |
Gene: BMEI1604: 5-aminolevulinate synthase (EC 2.3.1.37) |
2
Mesorhizobium loti MAFF303099 Gene: mll6600: 5-aminolevulinate synthase (EC 2.3.1.37) Gene: mll5695: 5-aminolevulinate synthase (EC 2.3.1.37) |
Gene: Meso_0088: 5-aminolevulinate synthase (EC 2.3.1.37) |
*
Nitrobacter winogradskyi Nb-255 Site: position = -141 score = 4.28405 sequence = CATTTGCGCCAGAGCAAATT Gene: Nwi_0242: 5-aminolevulinate synthase (EC 2.3.1.37) |
*2
Rhizobium etli CFN 42 Site: position = -238 score = 4.73143 sequence = TCTTTGATCGAAAGCAATCC Site: position = -69 score = 5.05916 sequence = AACTTGACGGAGATCAAATA Gene: RHE_PF00489: 5-aminolevulinate synthase (EC 2.3.1.37) Gene: RHE_CH03846: 5-aminolevulinate synthase (EC 2.3.1.37) |
*2
Rhizobium leguminosarum bv. viciae 3841 Site: position = -70 score = 5.33189 sequence = AACTTGATCAGGATCAATTA Gene: pRL90008: 5-aminolevulinate synthase (EC 2.3.1.37) Gene: RL4379: 5-aminolevulinate synthase (EC 2.3.1.37) |
*
Rhizobium sp. NGR234 Site: position = -156 score = 5.15931 sequence = TGCTTGACTTCGATCAAAGT Gene: NGR_c30700: 5-aminolevulinate synthase (EC 2.3.1.37) |
*2
Rhodopseudomonas palustris CGA009 Gene: RPA1554: 5-aminolevulinate synthase (EC 2.3.1.37) Site: position = -169 score = 5.2279 sequence = GCATTGATCTTCATCAAGCC Gene: RPA0854: 5-aminolevulinate synthase (EC 2.3.1.37) |
*
Sinorhizobium meliloti 1021 Site: position = -291 score = 4.32315 sequence = TGCTTGACTTCGATCGATGT Gene: SMc03104: 5-aminolevulinate synthase (EC 2.3.1.37) |
*
Xanthobacter autotrophicus Py2 Site: position = -108 score = 4.3899 sequence = CTCTTGATTGGTATCAATAC Gene: Xaut_2126: 5-aminolevulinate synthase (EC 2.3.1.37) |
5-aminolevulinate synthase (EC 2.3.1.37) |
| CRON 15. | ||||||||||||||||
| ccmI |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -148 score = 5.21633 sequence = AGTTTGACGTAAATCAAGGT Gene: Atu0973: Cytochrome c heme lyase subunit CcmI |
Gene: AZC_1132: Cytochrome c heme lyase subunit CcmI |
Gene: BQ03930: Cytochrome c heme lyase subunit CcmI |
Gene: blr3125: Cytochrome c heme lyase subunit CcmI |
Gene: BBta_3071: Cytochrome c heme lyase subunit CcmI |
Gene: BMEI1334: Cytochrome c heme lyase subunit CcmI |
*
Mesorhizobium loti MAFF303099 Site: position = -98 score = 5.19421 sequence = CGGTTGATGTCGATCAAGGA Gene: mlr7688: Cytochrome c heme lyase subunit CcmI |
Gene: Meso_0897: Cytochrome c heme lyase subunit CcmI |
Gene: Nwi_1191: Cytochrome c heme lyase subunit CcmI |
*2
Rhizobium etli CFN 42 Gene: RHE_CH01289: Cytochrome c heme lyase subunit CcmI Site: position = -70 score = 4.83155 sequence = AATTTGACCGGCGTCAATGT Gene: RHE_PF00498: Cytochrome c heme lyase subunit CcmI |
Gene: RL1436: Cytochrome c heme lyase subunit CcmI |
Gene: NGR_c07790: Cytochrome c heme lyase subunit CcmI |
*
Rhodopseudomonas palustris CGA009 Site: position = -157 score = 5.30543 sequence = CCTTTGATTCAAATCAAGTT Gene: RPA1919: Cytochrome c heme lyase subunit CcmI |
Gene: SMc02361: Cytochrome c heme lyase subunit CcmI |
Gene: Xaut_1655: Cytochrome c heme lyase subunit CcmI |
Cytochrome c heme lyase subunit CcmI |
| ccmE |
Gene: Atu0974: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: AZC_1133: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: BQ03940: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: blr3126: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: BBta_3072: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: BMEI1333: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: mlr7689: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: Meso_0898: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: Nwi_1192: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
2
Rhizobium etli CFN 42 Gene: RHE_CH01290: Cytochrome c-type biogenesis protein CcmE, heme chaperone Gene: RHE_PF00497: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: RL1437: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: NGR_c07800: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: RPA1920: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: SMc02362: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: Xaut_1656: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Cytochrome c-type biogenesis protein CcmE, heme chaperone |
| ccmF |
Gene: Atu0975: Cytochrome c heme lyase subunit CcmF |
Gene: AZC_1134: Cytochrome c heme lyase subunit CcmF |
Gene: BQ03950: Cytochrome c heme lyase subunit CcmF |
Gene: blr3127: Cytochrome c heme lyase subunit CcmF |
Gene: BBta_3073: Cytochrome c heme lyase subunit CcmF |
Gene: BMEI1332: Cytochrome c heme lyase subunit CcmF |
Gene: mlr7690: Cytochrome c heme lyase subunit CcmF |
Gene: Meso_0899: Cytochrome c heme lyase subunit CcmF |
Gene: Nwi_1193: Cytochrome c heme lyase subunit CcmF |
2
Rhizobium etli CFN 42 Gene: RHE_PF00496: Cytochrome c heme lyase subunit CcmF Gene: RHE_CH01291: Cytochrome c heme lyase subunit CcmF |
Gene: RL1438: Cytochrome c heme lyase subunit CcmF |
Gene: NGR_c07810: Cytochrome c heme lyase subunit CcmF |
Gene: RPA1921: Cytochrome c heme lyase subunit CcmF |
Gene: SMc02363: Cytochrome c heme lyase subunit CcmF |
Gene: Xaut_1657: Cytochrome c heme lyase subunit CcmF |
Cytochrome c heme lyase subunit CcmF |
| ccmH |
Gene: Atu0976: Cytochrome c heme lyase subunit CcmH |
Gene: AZC_1135: Cytochrome c heme lyase subunit CcmH |
Gene: BQ03960: Cytochrome c heme lyase subunit CcmH |
Gene: blr3128: Cytochrome c heme lyase subunit CcmH |
Gene: BBta_3074: Cytochrome c heme lyase subunit CcmH |
Gene: BMEI1331: Cytochrome c heme lyase subunit CcmH |
Gene: mlr7691: Cytochrome c heme lyase subunit CcmH |
Gene: Meso_0900: Cytochrome c heme lyase subunit CcmH |
Gene: Nwi_1194: Cytochrome c heme lyase subunit CcmH |
Gene: RHE_CH01292: Cytochrome c heme lyase subunit CcmH |
Gene: RL1439: Cytochrome c heme lyase subunit CcmH |
Gene: NGR_c07820: Cytochrome c heme lyase subunit CcmH |
Gene: RPA1922: Cytochrome c heme lyase subunit CcmH |
Gene: SMc02364: Cytochrome c heme lyase subunit CcmH |
Gene: Xaut_1658: Cytochrome c heme lyase subunit CcmH |
Cytochrome c heme lyase subunit CcmH |
| CRON 16. | ||||||||||||||||
| hemN |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -105 score = 3.83095 sequence = ACTTTGCGCGAGCGCAAGGT Gene: bll7086: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) |
*
Bradyrhizobium sp. BTAi1 Site: position = -88 score = 4.74306 sequence = GCTTTGAGCAGGCTCAAGGC Site: position = -161 score = 4.10892 sequence = ACTTTGAGGAAGCGCAAAGT Gene: BBta_6824: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) |
|
|
|
|
|
|
|
|
|
|
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) |
| bsl7085 |
|
|
|
|
|
|
|
*
Mesorhizobium sp. BNC1 Site: position = -166 score = 4.57799 sequence = ACATTGTCCTGAATCAAATC Gene: Meso_2247: hypothetical protein |
|
|
|
|
|
|
|
bsl7085; hypothetical protein |
| CRON 17. | ||||||||||||||||
| nosR |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -134 score = 4.88302 sequence = AGCTTGATCCAGCGCAAACA Gene: blr0314: Nitrous oxide reductase maturation protein NosR |
*
Bradyrhizobium sp. BTAi1 Site: position = -182 score = 4.73085 sequence = TGTTTGATCCAGCGCAACGT Gene: BBta_6007: Nitrous oxide reductase maturation protein NosR |
Gene: BMEII0975: Nitrous oxide reductase maturation protein NosR |
|
|
|
|
|
|
Gene: RPA2060: Nitrous oxide reductase maturation protein NosR |
*
Sinorhizobium meliloti 1021 Site: position = -83 score = 4.68456 sequence = AAGTTGATCTGGCGCAAAGA Gene: SMa1179: Nitrous oxide reductase maturation protein NosR |
|
Nitrous oxide reductase maturation protein NosR |
| nosZ |
|
|
|
Gene: blr0315: Nitrous-oxide reductase (EC 1.7.99.6) |
Gene: BBta_6008: Nitrous-oxide reductase (EC 1.7.99.6) |
2
Brucella melitensis 16M Gene: BMEII0973: Nitrous-oxide reductase (EC 1.7.99.6) Gene: BMEII0974: Nitrous-oxide reductase (EC 1.7.99.6) |
|
|
|
|
|
|
Gene: RPA2061: Nitrous-oxide reductase (EC 1.7.99.6) |
Gene: SMa1182: Nitrous-oxide reductase (EC 1.7.99.6) |
|
Nitrous-oxide reductase (EC 1.7.99.6) |
| nosD |
|
|
|
Gene: blr0316: Nitrous oxide reductase maturation protein NosD |
Gene: BBta_6009: Nitrous oxide reductase maturation protein NosD |
Gene: BMEII0972: Nitrous oxide reductase maturation protein NosD |
|
|
|
|
|
|
Gene: RPA2062: Nitrous oxide reductase maturation protein NosD |
Gene: SMa1183: Nitrous oxide reductase maturation protein NosD |
|
Nitrous oxide reductase maturation protein NosD |
| nosF |
|
|
|
Gene: blr0317: Nitrous oxide reductase maturation protein NosF (ATPase) |
Gene: BBta_6010: Nitrous oxide reductase maturation protein NosF (ATPase) |
Gene: BMEII0971: Nitrous oxide reductase maturation protein NosF (ATPase) |
|
|
|
|
|
|
Gene: RPA2063: Nitrous oxide reductase maturation protein NosF (ATPase) |
Gene: SMa1184: Nitrous oxide reductase maturation protein NosF (ATPase) |
|
Nitrous oxide reductase maturation protein NosF (ATPase) |
| nosY |
|
|
|
Gene: blr0318: Nitrous oxide reductase maturation transmembrane protein NosY |
Gene: BBta_6011: Nitrous oxide reductase maturation transmembrane protein NosY |
Gene: BMEII0970: Nitrous oxide reductase maturation transmembrane protein NosY |
|
|
|
|
|
|
Gene: RPA2064: Nitrous oxide reductase maturation transmembrane protein NosY |
Gene: SMa1185: Nitrous oxide reductase maturation transmembrane protein NosY |
|
Nitrous oxide reductase maturation transmembrane protein NosY |
| nosL |
|
|
|
Gene: blr0319: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL |
Gene: BBta_6012: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL |
Gene: BMEII0969: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL |
|
|
|
|
|
|
Gene: RPA2065: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL |
Gene: SMa1186: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL |
|
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL |
| nosX |
|
|
|
Gene: blr0320: Nitrous oxide reductase maturation periplasmic protein NosX |
Gene: BBta_6013: Nitrous oxide reductase maturation periplasmic protein NosX |
2
Brucella melitensis 16M Gene: BMEII0967: Nitrous oxide reductase maturation periplasmic protein NosX Gene: BMEII0968: Nitrous oxide reductase maturation periplasmic protein NosX |
|
|
|
|
|
|
Gene: RPA2066: Nitrous oxide reductase maturation periplasmic protein NosX |
Gene: SMa1188: Nitrous oxide reductase maturation periplasmic protein NosX |
|
Nitrous oxide reductase maturation periplasmic protein NosX |
| CRON 18. | ||||||||||||||||
| cydR |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -92 score = 4.73977 sequence = ATTTTGACGCAGGTCAAAAA Gene: Atu4088: Predicted transcriptional regulator, ArsR family |
*
Azorhizobium caulinodans ORS 571 Site: position = -55 score = 5.05792 sequence = AGGTTGCTCCAGATCAAACC Gene: AZC_0581: Predicted transcriptional regulator, ArsR family |
|
|
|
Gene: BMEII0763: Predicted transcriptional regulator, ArsR family |
|
|
|
|
*
Rhizobium leguminosarum bv. viciae 3841 Site: position = -75 score = 5.07282 sequence = GATTTGACCCAAGTCAAATT Gene: pRL90275: Predicted transcriptional regulator, ArsR family |
|
|
|
|
Predicted transcriptional regulator, ArsR family |
| cydD |
Gene: Atu4089: ATP-binding/permease protein CydD |
Gene: AZC_0582: ATP-binding/permease protein CydD |
|
|
|
Gene: BMEII0762: ATP-binding/permease protein CydD |
|
|
|
|
Gene: pRL90276: ATP-binding/permease protein CydD |
|
|
|
|
ATP-binding/permease protein CydD |
| cydC |
Gene: Atu4090: ATP-binding/permease protein CydC |
Gene: AZC_0583: ATP-binding/permease protein CydC |
|
|
|
Gene: BMEII0761: ATP-binding/permease protein CydC |
|
|
|
|
Gene: pRL90277: ATP-binding/permease protein CydC |
|
|
|
|
ATP-binding/permease protein CydC |
| cydA |
Gene: Atu4091: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
Gene: AZC_0584: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
|
|
|
Gene: BMEII0760: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
|
|
|
|
Gene: pRL90278: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
|
|
|
|
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) |
| cydB |
Gene: Atu4092: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
Gene: AZC_0585: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
|
|
|
Gene: BMEII0759: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
|
|
|
|
Gene: pRL90279: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
|
|
|
|
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
| cydX |
Gene: Atu8036: Cytochrome d ubiquinol oxidase subunit CydX (EC 1.10.3.-) |
Gene: AZC_0586: Cytochrome d ubiquinol oxidase subunit CydX (EC 1.10.3.-) |
|
|
|
Gene: BMEII0758: Cytochrome d ubiquinol oxidase subunit CydX (EC 1.10.3.-) |
|
|
|
|
|
|
|
|
|
Cytochrome d ubiquinol oxidase subunit CydX (EC 1.10.3.-) |
| CRON 19. | ||||||||||||||||
| napE |
Gene: Atu4405: Periplasmic nitrate reductase component NapE |
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -104 score = 5.48817 sequence = GGATTGATCCAGATCAACGC Gene: bsr7036: Periplasmic nitrate reductase component NapE |
*
Bradyrhizobium sp. BTAi1 Site: position = -103 score = 5.19286 sequence = GCCTTGATCCACGTCAACGC Gene: BBta_1864: Periplasmic nitrate reductase component NapE |
|
|
|
|
|
|
*
Rhizobium sp. NGR234 Site: position = -130 score = 4.73977 sequence = TAATTGACGAAAATCAATTT Gene: NGR_c09990: Periplasmic nitrate reductase component NapE |
|
*
Sinorhizobium meliloti 1021 Site: position = -131 score = 4.73977 sequence = TAATTGACGGAAATCAATTT Gene: SMa1241: Periplasmic nitrate reductase component NapE |
|
Periplasmic nitrate reductase component NapE |
| napF |
Gene: Atu4406: Periplasmic nitrate reductase, ferredoxin-type protein NapF |
|
|
|
|
|
|
|
|
|
|
Gene: NGR_c10000: Periplasmic nitrate reductase, ferredoxin-type protein NapF |
|
Gene: SMa1240: Periplasmic nitrate reductase, ferredoxin-type protein NapF |
|
Periplasmic nitrate reductase, ferredoxin-type protein NapF |
| napD |
Gene: Atu4407: Periplasmic nitrate reductase component NapD |
|
|
Gene: blr7037: Periplasmic nitrate reductase component NapD |
Gene: BBta_1863: Periplasmic nitrate reductase component NapD |
|
|
|
|
|
|
Gene: NGR_c10010: Periplasmic nitrate reductase component NapD |
|
Gene: SMa1239: Periplasmic nitrate reductase component NapD |
|
Periplasmic nitrate reductase component NapD |
| napA |
Gene: Atu4408: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
|
Gene: blr7038: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: BBta_1862: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
|
|
|
|
|
Gene: NGR_c10020: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
Gene: SMa1236: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
| napB |
Gene: Atu4409: Nitrate reductase cytochrome c550-type subunit |
|
|
Gene: blr7039: Nitrate reductase cytochrome c550-type subunit |
Gene: BBta_1861: Nitrate reductase cytochrome c550-type subunit |
|
|
|
|
|
|
Gene: NGR_c10030: Nitrate reductase cytochrome c550-type subunit |
|
Gene: SMa1233: Nitrate reductase cytochrome c550-type subunit |
|
Nitrate reductase cytochrome c550-type subunit |
| napC |
Gene: Atu4410: Cytochrome c-type protein NapC |
|
|
Gene: blr7040: Cytochrome c-type protein NapC |
Gene: BBta_1860: Cytochrome c-type protein NapC |
|
|
|
|
|
|
Gene: NGR_c10040: Cytochrome c-type protein NapC |
|
Gene: SMa1232: Cytochrome c-type protein NapC |
|
Cytochrome c-type protein NapC |
| CRON 20. | ||||||||||||||||
| aadR |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -103 score = 5.30633 sequence = GAATTGATCTGGGTCAACCG Gene: bll6061: Nitrogen fixation and oxygen response transcriptional regulator AadR, Crp family |
*
Bradyrhizobium sp. BTAi1 Site: position = -82 score = 5.24257 sequence = CATTTGATTTGAATCAATCG Gene: BBta_5746: Nitrogen fixation and oxygen response transcriptional regulator AadR, Crp family |
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -127 score = 5.20416 sequence = ACCTTGATCTGTGTCAAGCT Gene: RPA4234: Nitrogen fixation and oxygen response transcriptional regulator AadR, Crp family |
|
|
Nitrogen fixation and oxygen response transcriptional regulator AadR, Crp family |
| CRON 21. | ||||||||||||||||
| ompW |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -140 score = 4.90237 sequence = CATTTGATCCATCTCAATCG Gene: Atu3191: Outer membrane protein W precursor |
*
Azorhizobium caulinodans ORS 571 Site: position = -61 score = 5.5272 sequence = GATTTGATCTAGGTCAAACT Gene: AZC_3742: Outer membrane protein W precursor |
|
*2
Bradyrhizobium japonicum USDA 110 Site: position = -231 score = 4.75452 sequence = TATTTGATTGGTATCAAATC Gene: bll1766: Outer membrane protein W precursor Site: position = -63 score = 4.95422 sequence = GATTTGATCGGCGTCAAATC Gene: blr1311: Outer membrane protein W precursor |
*
Bradyrhizobium sp. BTAi1 Site: position = -108 score = 5.39489 sequence = CGATTGATCGAGATCAAATC Gene: BBta_0946: Outer membrane protein W precursor |
*
Brucella melitensis 16M Site: position = -108 score = 5.47891 sequence = TCTTTGATTTGGATCAATGG Gene: BMEI0454: Outer membrane protein W precursor |
Gene: mll6127: Outer membrane protein W precursor |
|
|
|
|
*
Rhizobium sp. NGR234 Site: position = -100 score = 5.10821 sequence = CGGTTGATCTCGATCAATAT Gene: NGR_a02570: Outer membrane protein W precursor |
*
Rhodopseudomonas palustris CGA009 Site: position = -98 score = 5.61143 sequence = CATTTGATCCAGATCAAATC Gene: RPA4502: Outer membrane protein W precursor |
|
*
Xanthobacter autotrophicus Py2 Site: position = -87 score = 4.91189 sequence = AAATTGACATAAATCAAACT Gene: Xaut_1968: Outer membrane protein W precursor |
Outer membrane protein W precursor |
| CRON 22. | ||||||||||||||||
| blr3521 |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -76 score = 4.58898 sequence = GCCTTGATTTGGCTCATACG Gene: blr3521: Lipocalin-related protein and Bos/Can/Equ allergen |
Gene: BBta_3681: Lipocalin-related protein and Bos/Can/Equ allergen |
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -107 score = 4.69361 sequence = CGGTTGCGCCAGATCAATGT Gene: RPA4462: Lipocalin-related protein and Bos/Can/Equ allergen |
|
|
Lipocalin-related protein and Bos/Can/Equ allergen |
| CRON 23. | ||||||||||||||||
| COG2524 |
|
|
|
Gene: blr2762: Predicted transcriptional regulator, contains C-terminal CBS domains |
|
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -161 score = 5.19753 sequence = GGTTTGACCTTGATCAATTC Gene: RPA4241: Predicted transcriptional regulator, contains C-terminal CBS domains |
|
|
Predicted transcriptional regulator, contains C-terminal CBS domains |
| CRON 24. | ||||||||||||||||
| bchE |
|
|
|
Gene: blr0853: Mg-protoporphyrin IX monomethyl ester oxidative cyclase (EC 1.14.13.81) |
*
Bradyrhizobium sp. BTAi1 Site: position = -76 score = 5.28062 sequence = CGTTTGAGCCAGATCAATTT Gene: BBta_6404: Mg-protoporphyrin IX monomethyl ester oxidative cyclase (EC 1.14.13.81) |
|
Gene: mll4828: Mg-protoporphyrin IX monomethyl ester oxidative cyclase (EC 1.14.13.81) |
|
|
Gene: RHE_CH00422: Mg-protoporphyrin IX monomethyl ester oxidative cyclase (EC 1.14.13.81) |
Gene: RL0441: Mg-protoporphyrin IX monomethyl ester oxidative cyclase (EC 1.14.13.81) |
|
*
Rhodopseudomonas palustris CGA009 Site: position = -71 score = 4.99926 sequence = CGTTTGATCTGCGTCAACAA Gene: RPA1668: Mg-protoporphyrin IX monomethyl ester oxidative cyclase (EC 1.14.13.81) |
|
|
Mg-protoporphyrin IX monomethyl ester oxidative cyclase (EC 1.14.13.81) |
| CRON 25. | ||||||||||||||||
| irr |
Gene: Atu0153: Iron-responsive regulator Irr, Fur family |
2
Azorhizobium caulinodans ORS 571 Gene: AZC_0367: Iron-responsive regulator Irr, Fur family Gene: AZC_3445: Iron-responsive regulator Irr, Fur family |
Gene: BQ01230: Iron-responsive regulator Irr, Fur family |
2
Bradyrhizobium japonicum USDA 110 Gene: bll0768: Iron-responsive regulator Irr, Fur family Gene: blr1216: Iron-responsive regulator Irr, Fur family |
Gene: BBta_0071: Iron-responsive regulator Irr, Fur family |
2
Brucella melitensis 16M Gene: BMEI1955: Iron-responsive regulator Irr, Fur family Gene: BMEI1563: Iron-responsive regulator Irr, Fur family |
Gene: mlr5570: Iron-responsive regulator Irr, Fur family |
Gene: Meso_3940: Iron-responsive regulator Irr, Fur family |
Gene: Nwi_0035: Iron-responsive regulator Irr, Fur family |
Gene: RHE_CH00106: Iron-responsive regulator Irr, Fur family |
2
Rhizobium leguminosarum bv. viciae 3841 Gene: RL0115: Iron-responsive regulator Irr, Fur family Gene: pRL110146: Iron-responsive regulator Irr, Fur family |
Gene: NGR_c35780: Iron-responsive regulator Irr, Fur family |
*2
Rhodopseudomonas palustris CGA009 Site: position = -70 score = 4.53116 sequence = GATTTGACTGCGGTCAATTC Site: position = -188 score = 5.29217 sequence = TCCTTGATGCACATCAAATG Gene: RPA2339: Iron-responsive regulator Irr, Fur family Gene: RPA0424: Iron-responsive regulator Irr, Fur family |
Gene: SMc00329: Iron-responsive regulator Irr, Fur family |
Gene: Xaut_3845: Iron-responsive regulator Irr, Fur family |
Iron-responsive regulator Irr, Fur family |
| CRON 26. | ||||||||||||||||
| hemC |
Gene: Atu2652: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: AZC_0261: Porphobilinogen deaminase (EC 2.5.1.61) |
|
Gene: blr2398: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: BBta_2191: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: BMEI0176: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: mll4223: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Meso_3202: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Nwi_0471: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: RHE_CH03904: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: RL4495: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: NGR_c32110: Porphobilinogen deaminase (EC 2.5.1.61) |
*
Rhodopseudomonas palustris CGA009 Site: position = -243 score = 4.51042 sequence = CTTTTGACCTTGCTCAATAT Site: position = -143 score = 4.42536 sequence = GAATTGTCCGAGATCAACGA Gene: RPA1505: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: SMc03231: Porphobilinogen deaminase (EC 2.5.1.61) |
Gene: Xaut_1158: Porphobilinogen deaminase (EC 2.5.1.61) |
Porphobilinogen deaminase (EC 2.5.1.61) |
| bchI |
|
|
|
|
Gene: BBta_6449: Protoporphyrin IX Mg-chelatase subunit I (EC 6.6.1.1) |
|
|
|
|
|
|
|
Gene: RPA1506: Protoporphyrin IX Mg-chelatase subunit I (EC 6.6.1.1) |
|
|
Protoporphyrin IX Mg-chelatase subunit I (EC 6.6.1.1) |
| bchD |
|
|
|
|
Gene: BBta_6448: Protoporphyrin IX Mg-chelatase subunit D (EC 6.6.1.1) |
|
|
|
|
|
|
|
Gene: RPA1507: Protoporphyrin IX Mg-chelatase subunit D (EC 6.6.1.1) |
|
|
Protoporphyrin IX Mg-chelatase subunit D (EC 6.6.1.1) |
| CRON 27. | ||||||||||||||||
| RPA1090 |
|
|
|
|
*
Bradyrhizobium sp. BTAi1 Site: position = -133 score = 4.69551 sequence = CCATTGACATAGCTCAACCG Gene: BBta_3690: Predicted transcriptional regulator, Crp family |
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -72 score = 5.20713 sequence = CGGTTGATCAAGATCAACTG Gene: RPA1090: Predicted transcriptional regulator, Crp family |
|
|
Predicted transcriptional regulator, Crp family |
| CRON 28. | ||||||||||||||||
| mhpA |
|
|
|
|
*
Bradyrhizobium sp. BTAi1 Site: position = -52 score = 5.75838 sequence = CCTTTGATCCAGATCAAGCG Gene: BBta_2733: Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8) |
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -69 score = 4.87993 sequence = TATTTGACGCACGTCAAATA Gene: RPA1006: Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8) |
|
|
Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8) |
| mhpB |
|
|
|
|
Gene: BBta_2734: Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) |
|
|
|
|
|
|
|
Gene: RPA1007: Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) |
|
|
Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) |
| CRON 29. | ||||||||||||||||
| mtrA |
|
|
|
|
|
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -234 score = 5.35366 sequence = TAATTGATCTCGATCAAATA Gene: RPA0746: Decaheme cytochrome c MtrA |
|
|
Decaheme cytochrome c MtrA |
| CRON 30. | ||||||||||||||||
| badD |
|
|
|
|
|
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -120 score = 5.37562 sequence = AATTTGATCCGCATCAAATT Gene: RPA0657: Benzoyl-CoA reductase subunit BadD (EC 1.3.99.15) |
|
|
Benzoyl-CoA reductase subunit BadD (EC 1.3.99.15) |
| badE |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA0658: Benzoyl-CoA reductase subunit BadE (EC 1.3.99.15) |
|
|
Benzoyl-CoA reductase subunit BadE (EC 1.3.99.15) |
| badF |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA0659: Benzoyl-CoA reductase subunit BadF (EC 1.3.99.15) |
|
|
Benzoyl-CoA reductase subunit BadF (EC 1.3.99.15) |
| badG |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA0660: Benzoyl-CoA reductase subunit BadG (EC 1.3.99.15) |
|
|
Benzoyl-CoA reductase subunit BadG (EC 1.3.99.15) |
| badA |
|
|
|
|
Gene: BBta_6637: Benzoate-CoA ligase (EC 6.2.1.25) |
|
|
|
|
|
|
|
Gene: RPA0661: Benzoate-CoA ligase (EC 6.2.1.25) |
|
|
Benzoate-CoA ligase (EC 6.2.1.25) |
| CRON 31. | ||||||||||||||||
| RPA0260 |
|
|
|
|
|
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = 13 score = 4.97283 sequence = GTTTTGATCCAGAGCAAAGA Gene: RPA0260: Possible photosynthesis gene regulator, AppA/PpaA family |
|
|
Possible photosynthesis gene regulator, AppA/PpaA family |
| CRON 32. | ||||||||||||||||
| bsr3073 |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -41 score = 4.51609 sequence = GATTTGTCCGGGATCAATGA Site: position = -104 score = 5.1644 sequence = TCATTGACGCGGATCAATTG Gene: bsr3073: Conserved hypothetical protein |
*
Bradyrhizobium sp. BTAi1 Site: position = -90 score = 4.881 sequence = CGGTTGTTCCAGATCAATGA Gene: BBta_3726: Conserved hypothetical protein |
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -58 score = 5.72616 sequence = CGTTTGATCCAGATCAAACT Gene: RPA1014: Conserved hypothetical protein |
|
*
Xanthobacter autotrophicus Py2 Site: position = -72 score = 4.31271 sequence = CAGTTGATCGTTGTCAAAAG Gene: Xaut_3275: Conserved hypothetical protein |
Conserved hypothetical protein |
| CRON 33. | ||||||||||||||||
| ctaC |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -178 score = 4.15737 sequence = GGATTGATCAATGGCAAAAT Site: position = -71 score = 5.09475 sequence = TGATTGATCTAGATCAGACG Gene: Atu0767: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
Gene: AZC_2960: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
|
|
*
Bradyrhizobium sp. BTAi1 Site: position = -181 score = 4.24938 sequence = GCATTGCGATAGATCAAGAA Gene: BBta_0828: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
Gene: BMEI1466: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
Gene: mlr7490: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
Gene: Meso_0741: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
*2
Nitrobacter winogradskyi Nb-255 Site: position = -196 score = 4.47443 sequence = TGTTTGATACAGCGCAAAGA Gene: Nwi_0761: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) Gene: Nwi_0223: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
*
Rhizobium etli CFN 42 Site: position = -177 score = 4.10268 sequence = CGTTTGAGCCAACACAATGC Gene: RHE_CH00952: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
Gene: RL1021: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
*
Rhizobium sp. NGR234 Site: position = -38 score = 5.46676 sequence = GGTTTGATCCTGATCAAGCG Gene: NGR_c05230: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
Gene: RPA0831: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
*
Sinorhizobium meliloti 1021 Site: position = -38 score = 5.46676 sequence = GGTTTGATCCTGATCAAGCG Gene: SMc00009: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
Gene: Xaut_4648: Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
Cytochrome c oxidase polypeptide II (EC 1.9.3.1) |
| ctaD |
Gene: Atu0768: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Gene: AZC_2959: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
|
|
Gene: BBta_0829: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Gene: BMEI1465: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Gene: mlr7491: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Gene: Meso_0742: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
2
Nitrobacter winogradskyi Nb-255 Gene: Nwi_0762: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) Gene: Nwi_0224: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Gene: RHE_CH00953: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Gene: RL1022: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Gene: NGR_c05240: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Gene: RPA0832: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Gene: SMc00010: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Gene: Xaut_4647: Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
Cytochrome c oxidase polypeptide I (EC 1.9.3.1) |
| ctaB |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -209 score = 3.84627 sequence = GCCTTTATGAAAAGCAAGCG Gene: Atu0769: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: AZC_2958: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
|
|
Gene: BBta_0830: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: BMEI1464: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: mlr7493: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: Meso_0743: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
2
Nitrobacter winogradskyi Nb-255 Gene: Nwi_0763: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB Gene: Nwi_0225: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: RHE_CH00954: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: RL1023: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: NGR_c05250: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: RPA0833: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: SMc00450: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Gene: Xaut_4646: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB |
| ctaX |
Gene: Atu8013: Hypothetical protein in cta gene cluster |
Gene: AZC_2957: Hypothetical protein in cta gene cluster |
|
|
Gene: BBta_0831: Hypothetical protein in cta gene cluster |
|
Gene: msr7494: Hypothetical protein in cta gene cluster |
Gene: Meso_0744: Hypothetical protein in cta gene cluster |
2
Nitrobacter winogradskyi Nb-255 Gene: Nwi_0764: Hypothetical protein in cta gene cluster Gene: Nwi_0226: Hypothetical protein in cta gene cluster |
|
Gene: RL1024: Hypothetical protein in cta gene cluster |
Gene: NGR_c05260: Hypothetical protein in cta gene cluster |
Gene: RPA0834: Hypothetical protein in cta gene cluster |
Gene: SMc00130: Hypothetical protein in cta gene cluster |
Gene: Xaut_4645: Hypothetical protein in cta gene cluster |
Hypothetical protein in cta gene cluster |
| ctaG |
Gene: Atu0770: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Gene: AZC_2956: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
|
|
Gene: BBta_0832: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Gene: BMEI1463: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Gene: mlr7495: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Gene: Meso_0745: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
2
Nitrobacter winogradskyi Nb-255 Gene: Nwi_0765: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 Gene: Nwi_0227: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Gene: RHE_CH00955: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Gene: RL1025: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Gene: NGR_c05270: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Gene: RPA0835: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Gene: SMc00012: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Gene: Xaut_4644: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 |
| ctaE |
Gene: Atu0771: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Gene: AZC_2955: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
|
|
Gene: BBta_0833: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Gene: BMEI1462: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Gene: mlr7496: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Gene: Meso_0746: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
2
Nitrobacter winogradskyi Nb-255 Gene: Nwi_0766: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) Gene: Nwi_0228: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Gene: RHE_CH00956: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Gene: RL1026: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Gene: NGR_c05280: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Gene: RPA0836: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Gene: SMc00013: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Gene: Xaut_4643: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
| CRON 34. | ||||||||||||||||
| hbaB |
|
|
|
|
|
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -65 score = 4.41967 sequence = TGCTTGACTTTGGTCATGGA Gene: RPA0670: 4-hydroxybenzoyl-CoA reductase, gamma subunit (EC 1.3.99.20) |
|
|
4-hydroxybenzoyl-CoA reductase, gamma subunit (EC 1.3.99.20) |
| hbaC |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA0671: 4-hydroxybenzoyl-CoA reductase, alpha subunit (EC 1.3.99.20) |
|
|
4-hydroxybenzoyl-CoA reductase, alpha subunit (EC 1.3.99.20) |
| hbaD |
|
|
|
|
|
|
|
|
|
|
|
|
Gene: RPA0672: 4-hydroxybenzoyl-CoA reductase, beta subunit (EC 1.3.99.20) |
|
|
4-hydroxybenzoyl-CoA reductase, beta subunit (EC 1.3.99.20) |
| CRON 35. | ||||||||||||||||
| blr6062 |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -75 score = 5.30633 sequence = CGGTTGACCCAGATCAATTC Gene: blr6062: Putative cytochrome C6 precursor |
*
Bradyrhizobium sp. BTAi1 Site: position = -77 score = 5.24257 sequence = CGATTGATTCAAATCAAATG Gene: BBta_5747: Putative cytochrome C6 precursor |
|
|
|
*
Nitrobacter winogradskyi Nb-255 Site: position = -139 score = 5.27678 sequence = CGATTGATCCAAATCAAGAT Site: position = -77 score = 5.09598 sequence = GCCTTGACCTAAGTCAACGA Gene: Nwi_1034: Putative cytochrome C6 precursor |
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -21 score = 5.20416 sequence = AGCTTGACACAGATCAAGGT Gene: RPA4235: Putative cytochrome C6 precursor |
Gene: SMa1104: Putative cytochrome C6 precursor |
|
Putative cytochrome C6 precursor |
| CRON 36. | ||||||||||||||||
| attK |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -123 score = 4.77614 sequence = CGATTGACCTGTCTCAAAGT Gene: bll3998: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
|
|
|
|
|
|
|
|
|
|
|
Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
| CRON 37. | ||||||||||||||||
| hspC2 |
|
|
|
*2
Bradyrhizobium japonicum USDA 110 Site: position = -89 score = 4.90838 sequence = GGCTTGAGCAAAATCAAATT Gene: blr4637: Small heat shock protein Site: position = -85 score = 4.75336 sequence = AATTTGAGACAAATCAAGGA Gene: blr7961: Small heat shock protein |
*
Bradyrhizobium sp. BTAi1 Site: position = -153 score = 5.16036 sequence = CATTTGATCGTGATCAATCT Gene: BBta_3527: Small heat shock protein |
|
|
*
Mesorhizobium sp. BNC1 Site: position = -256 score = 4.72749 sequence = AAGTTGACGCACGTCAATGC Gene: Meso_2276: Small heat shock protein |
|
|
*
Rhizobium leguminosarum bv. viciae 3841 Site: position = -87 score = 4.65473 sequence = GCCTTGTCCCAGGTCAATCC Site: position = -31 score = 4.80987 sequence = GATTTGACGGTGATCAAAGA Gene: RL1883: Small heat shock protein |
|
|
*
Sinorhizobium meliloti 1021 Site: position = -172 score = 4.87352 sequence = TCTTTGACGCCGGTCAATGA Gene: SMa1118: Small heat shock protein |
|
Small heat shock protein |
| CRON 38. | ||||||||||||||||
| ppsA |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -50 score = 4.86392 sequence = AGGTTGACCTGCCTCAAGGC Gene: blr4655: Phosphoenolpyruvate synthase (EC 2.7.9.2) |
*
Bradyrhizobium sp. BTAi1 Site: position = -76 score = 4.43248 sequence = CGCTTGATCTTCCGCAAGTC Gene: BBta_6481: Phosphoenolpyruvate synthase (EC 2.7.9.2) |
|
|
|
|
|
|
|
|
|
|
Phosphoenolpyruvate synthase (EC 2.7.9.2) |
| CRON 39. | ||||||||||||||||
| adhP |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -81 score = 4.73571 sequence = GCATTGAGGGAGGTCAAGGA Gene: blr6070: Predicted alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
*
Bradyrhizobium sp. BTAi1 Site: position = -75 score = 4.76686 sequence = ACCTTGACAGACATCAAGCC Gene: BBta_5755: Predicted alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
|
|
|
|
|
|
|
Gene: RPA0374: Predicted alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
|
*2
Xanthobacter autotrophicus Py2 Site: position = -107 score = 5.10745 sequence = CGGTTGACCCGCATCAATGC Gene: Xaut_0669: Predicted alcohol dehydrogenase (EC 1.1.1.1), zinc containing Gene: Xaut_2010: Predicted alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
Predicted alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
| COG2187 |
|
Gene: AZC_1165: Predicted kinase |
|
Gene: blr6071: Predicted kinase |
Gene: BBta_5756: Predicted kinase |
|
Gene: mll6593: Predicted kinase |
|
|
|
*
Rhizobium leguminosarum bv. viciae 3841 Site: position = -60 score = 4.97797 sequence = TCATTGATGCGCGTCAATGC Gene: pRL90039: Predicted kinase |
|
*
Rhodopseudomonas palustris CGA009 Site: position = -149 score = 5.19753 sequence = GAATTGATCAAGGTCAAACC Gene: RPA4242: Predicted kinase |
|
Gene: Xaut_0668: Predicted kinase |
Predicted kinase |
| CRON 40. | ||||||||||||||||
| BBta_5758 |
|
|
|
|
*
Bradyrhizobium sp. BTAi1 Site: position = -109 score = 5.27933 sequence = GAATTGACCCAGGTCAAAGG Site: position = -75 score = 5.11281 sequence = TCATTGATGCAGCTCAAGGC Gene: BBta_5758: hypothetical protein |
|
|
|
|
|
|
|
|
|
|
hypothetical protein |
| phbC |
|
|
|
*
Bradyrhizobium japonicum USDA 110 Site: position = -149 score = 5.19493 sequence = GGTTTGACTCAGGTCAAGCG Site: position = -84 score = 4.71877 sequence = GATTTGATGCAGCTCAACAC Gene: bll6073: Polyhydroxyalkanoic acid synthase |
Gene: BBta_5757: Polyhydroxyalkanoic acid synthase |
|
|
|
|
|
|
|
*
Rhodopseudomonas palustris CGA009 Site: position = -235 score = 5.01737 sequence = GGCTTGAGCAAGGTCAAGCG Gene: RPA4243: Polyhydroxyalkanoic acid synthase |
|
|
Polyhydroxyalkanoic acid synthase |
| CRON 41. | ||||||||||||||||
| nuoA |
*
Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -164 score = 4.05902 sequence = ATATTGTTGCCAATCAATGC Gene: Atu1268: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: AZC_1667: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: BQ05640: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: bll4919: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: BBta_4563: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: BMEI1158: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: mll1372: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Mesorhizobium sp. BNC1 Site: position = -136 score = 4.11689 sequence = GGTTTGACTTGCGTCACCGA Gene: Meso_1022: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: Nwi_1888: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: RHE_CH01602: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: RL1700: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: NGR_c10480: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*2
Rhodopseudomonas palustris CGA009 Site: position = -130 score = 4.96028 sequence = GAGTTGATCCGCGTCAACCA Gene: RPA4264: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) Gene: RPA2952: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: SMc01912: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
Gene: Xaut_4633: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
| nuoB |
Gene: Atu1269: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: AZC_1668: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: BQ05650: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: bll4918: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: BBta_4562: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: BMEI1157: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: mll1371: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Meso_1023: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Nwi_1887: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: RHE_CH01603: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: RL1701: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: NGR_c10490: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA4263: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) Gene: RPA2951: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: SMc01913: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Xaut_4632: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
| nuoC |
Gene: Atu1270: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: AZC_1669: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: BQ05660: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: bll4917: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: BBta_4561: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: BMEI1156: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: mll1369: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Meso_1024: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Nwi_1886: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: RHE_CH01604: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: RL1702: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: NGR_c10500: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: RPA2950: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: SMc01914: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Xaut_4631: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
| PF04828 |
Gene: Atu1271: Hypothetical protein |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Hypothetical protein |
| nouD |
Gene: Atu1272: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: AZC_1670: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: BQ05670: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: bll4916: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: BBta_4560: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: BMEI1155: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: mll1367: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Meso_1025: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Nwi_1885: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: RHE_CH01606: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: RL1703: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: NGR_c10510: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA4262: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) Gene: RPA2949: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: SMc01915: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Xaut_4630: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
| Atu1273 |
Gene: Atu1273: Conserved hypothetical protein |
|
|
|
|
|
|
|
|
Gene: RHE_CH01607: Conserved hypothetical protein |
|
Gene: NGR_c10520: Conserved hypothetical protein |
|
Gene: SMc01916: Conserved hypothetical protein |
|
Conserved hypothetical protein |
| nuoE |
Gene: Atu1274: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: AZC_1671: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: BQ05680: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: bll4914: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: BBta_4558: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: BMEI1154: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: mll1366: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Meso_1026: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Nwi_1883: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: RHE_CH01608: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: RL1704: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: NGR_c10530: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA2947: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) Gene: RPA4261: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: SMc01917: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Xaut_4629: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
| nuoF |
Gene: Atu1275: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: AZC_1672: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: BQ05690: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: bll4912: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: BBta_4556: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: BMEI1153: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: mll1365: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Meso_1027: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Nwi_1882: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: RHE_CH01609: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: RL1705: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: NGR_c10540: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA2945: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) Gene: RPA4260: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: SMc01918: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Xaut_4628: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
| nuoG |
Gene: Atu1276: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: AZC_1674: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: BQ05700: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: bll4911: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: BBta_4555: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: BMEI1152: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: mll1362: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Meso_1028: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Nwi_1881: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: RHE_CH01611: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: RL1707: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: NGR_c10560: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA4259: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) Gene: RPA2944: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: SMc01920: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Xaut_4627: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
| nuoH |
Gene: Atu1277: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: AZC_1675: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: BQ05710: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: bll4910: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: BBta_4554: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: BMEI1151: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: mll1361: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Meso_1029: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Nwi_1880: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: RHE_CH01612: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: RL1708: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: NGR_c10570: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA4258: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) Gene: RPA2943: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: SMc01921: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Xaut_4626: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
| nuoI |
Gene: Atu1278: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: AZC_1676: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: BQ05720: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: bll4909: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: BBta_4553: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: BMEI1150: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: mll1359: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Meso_1030: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Nwi_1879: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: RHE_CH01613: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: RL1709: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: NGR_c10580: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA4257: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) Gene: RPA2942: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: SMc01922: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Xaut_4625: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
| nuoJ |
Gene: Atu1279: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: AZC_1677: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: BQ05730: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: bll4908: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: BBta_4552: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: BMEI1149: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: mll1358: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Meso_1031: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Nwi_1878: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: RHE_CH01614: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: RL1710: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: NGR_c10590: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA2941: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) Gene: RPA4256: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: SMc01923: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Xaut_4624: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
| nuoK |
Gene: Atu1280: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: AZC_1678: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: BQ05740: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: bll4907: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: BBta_4551: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: BMEI1148: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: mll1357: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Meso_1032: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Nwi_1877: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: RHE_CH01615: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: RL1711: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: NGR_c10600: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA2940: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) Gene: RPA4255: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: SMc01924: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Xaut_4623: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
| nuoL |
Gene: Atu1281: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: AZC_1679: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: BQ05750: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: bll4906: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: BBta_4550: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: BMEI1147: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: mll1355: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Meso_1033: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Nwi_1876: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: RHE_CH01616: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: RL1712: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: NGR_c10610: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA2939: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) Gene: RPA4254: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: SMc01925: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Xaut_4622: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
| nuoM |
Gene: Atu1282: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: AZC_1680: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: BQ05760: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: bll4905: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: BBta_4549: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: BMEI1146: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: mll1354: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Meso_1034: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Nwi_1875: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: RHE_CH01617: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: RL1713: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: NGR_c10620: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA2938: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) Gene: RPA4253: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: SMc01926: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Xaut_4621: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
| nuoN |
Gene: Atu1283: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: AZC_1681: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: BQ05770: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: bll4904: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: BBta_4548: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: BMEI1145: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: mll1352: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Meso_1035: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Nwi_1874: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: RHE_CH01618: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: RL1714: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: NGR_c10630: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
2
Rhodopseudomonas palustris CGA009 Gene: RPA2937: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Gene: RPA4252: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: SMc01927: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Xaut_4620: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |