Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ctaD gene

Properties
Regulog: FnrN/FixK/AadR - Rhizobiales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Oxidative stress response; Nitrogen fixation
Effector: Oxygen
Phylum: Proteobacteria/Alpha
Built upon 192 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -178
Score: 4.15737
Sequence: GGATTGATCAATGGCAAAAT
Position: -71
Score: 5.09475
Sequence: TGATTGATCTAGATCAGACG
Locus tag: Atu0767
Name: ctaC
Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Atu0768
Name: ctaD
Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
ctaC-ctaD -178 4.2 GGATTGATCAATGGCAAAAT Atu0767
-71 5.1 TGATTGATCTAGATCAGACG
Bradyrhizobium sp. BTAi1
Position: -181
Score: 4.24938
Sequence: GCATTGCGATAGATCAAGAA
Locus tag: BBta_0828
Name: ctaC
Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: BBta_0829
Name: ctaD
Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: BBta_0830
Name: ctaB
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Locus tag: BBta_0831
Name: ctaX
Funciton: Hypothetical protein in cta gene cluster
Locus tag: BBta_0832
Name: ctaG
Funciton: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: BBta_0833
Name: ctaE
Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
ctaC-ctaD-ctaB-ctaX-ctaG-ctaE -181 4.2 GCATTGCGATAGATCAAGAA BBta_0828
Nitrobacter winogradskyi Nb-255
Position: -196
Score: 4.47443
Sequence: TGTTTGATACAGCGCAAAGA
Locus tag: Nwi_0761
Name: ctaC
Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Nwi_0762
Name: ctaD
Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Nwi_0763
Name: ctaB
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Locus tag: Nwi_0764
Name: ctaX
Funciton: Hypothetical protein in cta gene cluster
Locus tag: Nwi_0765
Name: ctaG
Funciton: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Nwi_0766
Name: ctaE
Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
ctaC-ctaD-ctaB-ctaX-ctaG-ctaE -196 4.5 TGTTTGATACAGCGCAAAGA Nwi_0761
Rhizobium etli CFN 42
Position: -177
Score: 4.10268
Sequence: CGTTTGAGCCAACACAATGC
Locus tag: RHE_CH00952
Name: ctaC
Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: RHE_CH00953
Name: ctaD
Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: RHE_CH00954
Name: ctaB
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Locus tag: RHE_CH00955
Name: ctaG
Funciton: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: RHE_CH00956
Name: ctaE
Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
ctaC-ctaD-ctaB-ctaG-ctaE -177 4.1 CGTTTGAGCCAACACAATGC RHE_CH00952
Rhizobium sp. NGR234
Position: -38
Score: 5.46676
Sequence: GGTTTGATCCTGATCAAGCG
Locus tag: NGR_c05230
Name: ctaC
Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: NGR_c05240
Name: ctaD
Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: NGR_c05250
Name: ctaB
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Locus tag: NGR_c05260
Name: ctaX
Funciton: Hypothetical protein in cta gene cluster
Locus tag: NGR_c05270
Name: ctaG
Funciton: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: NGR_c05280
Name: ctaE
Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
ctaC-ctaD-ctaB-ctaX-ctaG-ctaE -38 5.5 GGTTTGATCCTGATCAAGCG NGR_c05230
Sinorhizobium meliloti 1021
Position: -38
Score: 5.46676
Sequence: GGTTTGATCCTGATCAAGCG
Locus tag: SMc00009
Name: ctaC
Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: SMc00010
Name: ctaD
Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: SMc00450
Name: ctaB
Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Locus tag: SMc00130
Name: ctaX
Funciton: Hypothetical protein in cta gene cluster
Locus tag: SMc00012
Name: ctaG
Funciton: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: SMc00013
Name: ctaE
Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
ctaC-ctaD-ctaB-ctaX-ctaG-ctaE -38 5.5 GGTTTGATCCTGATCAAGCG SMc00009