Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ccmH gene

Properties
Regulog: FnrN/FixK/AadR - Rhizobiales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Oxidative stress response; Nitrogen fixation
Effector: Oxygen
Phylum: Proteobacteria/Alpha
Built upon 192 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -148
Score: 5.21633
Sequence: AGTTTGACGTAAATCAAGGT
Locus tag: Atu0973
Name: ccmI
Funciton: Cytochrome c heme lyase subunit CcmI
Locus tag: Atu0974
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: Atu0975
Name: ccmF
Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: Atu0976
Name: ccmH
Funciton: Cytochrome c heme lyase subunit CcmH
ccmI-ccmE-ccmF-ccmH -148 5.2 AGTTTGACGTAAATCAAGGT Atu0973
Mesorhizobium loti MAFF303099
Position: -98
Score: 5.19421
Sequence: CGGTTGATGTCGATCAAGGA
Locus tag: mlr7688
Name: ccmI
Funciton: Cytochrome c heme lyase subunit CcmI
Locus tag: mlr7689
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: mlr7690
Name: ccmF
Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: mlr7691
Name: ccmH
Funciton: Cytochrome c heme lyase subunit CcmH
ccmI-ccmE-ccmF-ccmH -98 5.2 CGGTTGATGTCGATCAAGGA mlr7688
Rhodopseudomonas palustris CGA009
Position: -157
Score: 5.30543
Sequence: CCTTTGATTCAAATCAAGTT
Locus tag: RPA1919
Name: ccmI
Funciton: Cytochrome c heme lyase subunit CcmI
Locus tag: RPA1920
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: RPA1921
Name: ccmF
Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: RPA1922
Name: ccmH
Funciton: Cytochrome c heme lyase subunit CcmH
ccmI-ccmE-ccmF-ccmH -157 5.3 CCTTTGATTCAAATCAAGTT RPA1919