Regulon of FnrN/FixK/AadR in Nitrobacter winogradskyi Nb-255
| Regulator type: | Transcription factor |
| TF locus tag: | Nwi_1036, Nwi_2061 |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Oxidative stress response; Nitrogen fixation |
| Effector: | Oxygen |
| Regulog: | FnrN/FixK/AadR - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - FnrN/FixK
- By TF family - CRP
- By effector - Oxygen
- By pathway - Oxidative stress response
- By pathway - Nitrogen fixation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -139
Score: 5.3 Sequence: CGATTGATCCAAATCAAGAT
Position: -77
Score: 5.1 Sequence: GCCTTGACCTAAGTCAACGA
Locus tag: Nwi_1034
Name: blr6062 Funciton: Putative cytochrome C6 precursor |
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blr6062
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Putative cytochrome C6 precursor
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Position: -141
Score: 4.3 Sequence: CATTTGCGCCAGAGCAAATT
Locus tag: Nwi_0242
Name: hemA Funciton: 5-aminolevulinate synthase (EC 2.3.1.37) |
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hemA
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5-aminolevulinate synthase (EC 2.3.1.37)
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Position: -196
Score: 4.5 Sequence: TGTTTGATACAGCGCAAAGA
Locus tag: Nwi_0761
Name: ctaC Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Nwi_0762
Name: ctaD Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Nwi_0763
Name: ctaB Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Locus tag: Nwi_0764
Name: ctaX Funciton: Hypothetical protein in cta gene cluster
Locus tag: Nwi_0765
Name: ctaG Funciton: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Nwi_0766
Name: ctaE Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1) |
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ctaC
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Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
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ctaD
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Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
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ctaB
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Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
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ctaX
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Hypothetical protein in cta gene cluster
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ctaG
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Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
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ctaE
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Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |