Regulon of FnrN/FixK/AadR in Azorhizobium caulinodans ORS 571
| Regulator type: | Transcription factor |
| TF locus tag: | AZC_4653 |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Oxidative stress response; Nitrogen fixation |
| Effector: | Oxygen |
| Regulog: | FnrN/FixK/AadR - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 18 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - FnrN/FixK
- By TF family - CRP
- By effector - Oxygen
- By pathway - Oxidative stress response
- By pathway - Nitrogen fixation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -93
Score: 5 Sequence: CCTTTGACTTGTATCAAGGT
Locus tag: AZC_4523
Name: ccoN Funciton: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
Locus tag: AZC_4524
Name: ccoO Funciton: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
Locus tag: AZC_4525
Name: ccoQ Funciton: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1)
Locus tag: AZC_4526
Name: ccoP Funciton: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1)
Locus tag: AZC_4527
Name: ccoG Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation
Locus tag: AZC_4528
Name: ccoH Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoH
Locus tag: AZC_4529
Name: ccoI Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4)
Locus tag: AZC_4530
Name: ccoS Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion
Locus tag: AZC_4531
Name: PF00083 Funciton: Predicted transporter, MFS family |
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ccoN
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Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
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ccoO
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Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
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ccoQ
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Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1)
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ccoP
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Cytochrome c oxidase subunit CcoP (EC 1.9.3.1)
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ccoG
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Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation
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ccoH
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Type cbb3 cytochrome oxidase biogenesis protein CcoH
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ccoI
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Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4)
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ccoS
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Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion
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PF00083
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Predicted transporter, MFS family
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Position: -61
Score: 5.5 Sequence: GATTTGATCTAGGTCAAACT
Locus tag: AZC_3742
Name: ompW Funciton: Outer membrane protein W precursor |
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ompW
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Outer membrane protein W precursor
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Position: -175
Score: 5.3 Sequence: GCGTTGATCCGCATCAAGCA
Position: -67
Score: 5.5 Sequence: AGCTTGATGCGGATCAAGGT
Locus tag: AZC_0320
Name: adhA Funciton: Alcohol dehydrogenase (EC 1.1.1.1), zinc containing |
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adhA
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Alcohol dehydrogenase (EC 1.1.1.1), zinc containing
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Position: -55
Score: 5.1 Sequence: AGGTTGCTCCAGATCAAACC
Locus tag: AZC_0581
Name: cydR Funciton: Predicted transcriptional regulator, ArsR family
Locus tag: AZC_0582
Name: cydD Funciton: ATP-binding/permease protein CydD
Locus tag: AZC_0583
Name: cydC Funciton: ATP-binding/permease protein CydC
Locus tag: AZC_0584
Name: cydA Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: AZC_0585
Name: cydB Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
Locus tag: AZC_0586
Name: cydX Funciton: Cytochrome d ubiquinol oxidase subunit CydX (EC 1.10.3.-) |
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cydR
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Predicted transcriptional regulator, ArsR family
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cydD
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ATP-binding/permease protein CydD
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cydC
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ATP-binding/permease protein CydC
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cydA
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Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
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cydB
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Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
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cydX
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Cytochrome d ubiquinol oxidase subunit CydX (EC 1.10.3.-)
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Position: -84
Score: 4.7 Sequence: CACTTGATCGAGCGCAAGGG
Locus tag: AZC_0334
Name: hemA Funciton: 5-aminolevulinate synthase (EC 2.3.1.37) |
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hemA
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5-aminolevulinate synthase (EC 2.3.1.37)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |